RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 NEURL4Q96JN8 1562 aa23.92■■□□□ 1.42
UBE2F-219ENST00000455999 CAMSAP2Q08AD1 1489 aa23.91■■□□□ 1.42
UBE2F-219ENST00000455999 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
UBE2F-219ENST00000455999 FBXO31Q5XUX0 539 aaPredicted RBP23.9■■□□□ 1.42
UBE2F-219ENST00000455999 NCOA2Q15596 1464 aa23.89■■□□□ 1.42
UBE2F-219ENST00000455999 CCDC141Q6ZP82 1450 aa23.89■■□□□ 1.42
UBE2F-219ENST00000455999 KIF3BO15066 747 aa23.89■■□□□ 1.41
UBE2F-219ENST00000455999 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
UBE2F-219ENST00000455999 TNRQ92752 1358 aa23.86■■□□□ 1.41
UBE2F-219ENST00000455999 PZPP20742 1482 aa23.86■■□□□ 1.41
UBE2F-219ENST00000455999 ARHGEF5Q12774 1597 aa23.82■■□□□ 1.4
UBE2F-219ENST00000455999 FAM135AQ9P2D6 1515 aa23.82■■□□□ 1.4
UBE2F-219ENST00000455999 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
UBE2F-219ENST00000455999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
UBE2F-219ENST00000455999 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
UBE2F-219ENST00000455999 SHANK2Q9UPX8 1470 aa23.78■■□□□ 1.4
UBE2F-219ENST00000455999 CPS1P31327 1500 aa23.78■■□□□ 1.4
UBE2F-219ENST00000455999 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
UBE2F-219ENST00000455999 CEP152O94986 1710 aa23.77■■□□□ 1.4
UBE2F-219ENST00000455999 UGGT1Q9NYU2 1555 aa23.77■■□□□ 1.4
UBE2F-219ENST00000455999 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
UBE2F-219ENST00000455999 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
UBE2F-219ENST00000455999 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
UBE2F-219ENST00000455999 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
UBE2F-219ENST00000455999 RSPH4AQ5TD94 716 aa23.75■■□□□ 1.39
UBE2F-219ENST00000455999 IQGAP1P46940 1657 aa23.75■■□□□ 1.39
UBE2F-219ENST00000455999 ZC3H13Q5T200 1668 aaKnown RBP23.74■■□□□ 1.39
UBE2F-219ENST00000455999 PIP4K2BP78356 416 aa23.74■■□□□ 1.39
UBE2F-219ENST00000455999 HSPA1LP34931 641 aa23.73■■□□□ 1.39
UBE2F-219ENST00000455999 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
UBE2F-219ENST00000455999 MAST1Q9Y2H9 1570 aa23.73■■□□□ 1.39
UBE2F-219ENST00000455999 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
UBE2F-219ENST00000455999 MED1Q15648 1581 aaPredicted RBP23.72■■□□□ 1.39
UBE2F-219ENST00000455999 ALKQ9UM73 1620 aa23.72■■□□□ 1.39
UBE2F-219ENST00000455999 ABCC3O15438 1527 aa23.71■■□□□ 1.39
UBE2F-219ENST00000455999 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
UBE2F-219ENST00000455999 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.39
UBE2F-219ENST00000455999 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
UBE2F-219ENST00000455999 TSPY4P0CV99 314 aa23.7■■□□□ 1.38
UBE2F-219ENST00000455999 TSPY10P0CW01 314 aa23.7■■□□□ 1.38
UBE2F-219ENST00000455999 THEMISQ8N1K5 641 aaPredicted RBP23.7■■□□□ 1.38
UBE2F-219ENST00000455999 MED14O60244 1454 aa23.69■■□□□ 1.38
UBE2F-219ENST00000455999 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
UBE2F-219ENST00000455999 UBR1Q8IWV7 1749 aa23.68■■□□□ 1.38
UBE2F-219ENST00000455999 TOM1O60784 492 aa23.68■■□□□ 1.38
UBE2F-219ENST00000455999 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
UBE2F-219ENST00000455999 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
UBE2F-219ENST00000455999 XIRP1Q702N8 1843 aaKnown RBP23.61■■□□□ 1.37
UBE2F-219ENST00000455999 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
UBE2F-219ENST00000455999 CROCC2H7BZ55 1655 aa23.6■■□□□ 1.37
UBE2F-219ENST00000455999 SYNMO15061 1565 aa23.59■■□□□ 1.37
UBE2F-219ENST00000455999 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
UBE2F-219ENST00000455999 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
UBE2F-219ENST00000455999 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
UBE2F-219ENST00000455999 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
UBE2F-219ENST00000455999 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
UBE2F-219ENST00000455999 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
UBE2F-219ENST00000455999 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
UBE2F-219ENST00000455999 PRDM15P57071 1507 aaPredicted RBP23.52■■□□□ 1.36
UBE2F-219ENST00000455999 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
UBE2F-219ENST00000455999 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
UBE2F-219ENST00000455999 ARHGAP23Q9P227 1491 aa23.49■■□□□ 1.35
UBE2F-219ENST00000455999 SLIT1O75093 1534 aa23.49■■□□□ 1.35
UBE2F-219ENST00000455999 LTKP29376 864 aa23.48■■□□□ 1.35
UBE2F-219ENST00000455999 KIF15Q9NS87 1388 aa23.47■■□□□ 1.35
UBE2F-219ENST00000455999 ABCC5O15440 1437 aa23.46■■□□□ 1.35
UBE2F-219ENST00000455999 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
UBE2F-219ENST00000455999 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
UBE2F-219ENST00000455999 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
UBE2F-219ENST00000455999 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
UBE2F-219ENST00000455999 ERBINQ96RT1 1412 aa23.43■■□□□ 1.34
UBE2F-219ENST00000455999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
UBE2F-219ENST00000455999 KDM5AP29375 1690 aaKnown RBP23.4■■□□□ 1.34
UBE2F-219ENST00000455999 DAPK1P53355 1430 aa23.4■■□□□ 1.34
UBE2F-219ENST00000455999 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
UBE2F-219ENST00000455999 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
UBE2F-219ENST00000455999 EID1Q9Y6B2 187 aa23.35■■□□□ 1.33
UBE2F-219ENST00000455999 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
UBE2F-219ENST00000455999 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
UBE2F-219ENST00000455999 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.32
UBE2F-219ENST00000455999 FGD6Q6ZV73 1430 aa23.33■■□□□ 1.32
UBE2F-219ENST00000455999 KANK1Q14678 1352 aa23.32■■□□□ 1.32
UBE2F-219ENST00000455999 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
UBE2F-219ENST00000455999 TET3O43151 1660 aa23.32■■□□□ 1.32
UBE2F-219ENST00000455999 IDI1Q13907 227 aa23.31■■□□□ 1.32
UBE2F-219ENST00000455999 ROBO1Q9Y6N7 1651 aa23.31■■□□□ 1.32
UBE2F-219ENST00000455999 RGS17Q9UGC6 210 aaPredicted RBP23.3■■□□□ 1.32
UBE2F-219ENST00000455999 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
UBE2F-219ENST00000455999 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
UBE2F-219ENST00000455999 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
UBE2F-219ENST00000455999 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
UBE2F-219ENST00000455999 SLC26A8Q96RN1 970 aa23.27■■□□□ 1.32
UBE2F-219ENST00000455999 NOS1P29475 1434 aa23.26■■□□□ 1.31
UBE2F-219ENST00000455999 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
UBE2F-219ENST00000455999 APLP2Q06481 763 aa23.26■■□□□ 1.31
UBE2F-219ENST00000455999 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
UBE2F-219ENST00000455999 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
UBE2F-219ENST00000455999 NWD1Q149M9 1564 aa23.24■■□□□ 1.31
UBE2F-219ENST00000455999 KCNA6P17658 529 aa23.24■■□□□ 1.31
UBE2F-219ENST00000455999 PROSER2Q86WR7 435 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms