RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
CHCHD4-203ENST00000420103 NEURL4Q96JN8 1562 aa18.88■□□□□ 0.61
CHCHD4-203ENST00000420103 TNRQ92752 1358 aa18.87■□□□□ 0.61
CHCHD4-203ENST00000420103 HSPA1LP34931 641 aa18.85■□□□□ 0.61
CHCHD4-203ENST00000420103 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
CHCHD4-203ENST00000420103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHCHD4-203ENST00000420103 PZPP20742 1482 aa18.84■□□□□ 0.61
CHCHD4-203ENST00000420103 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
CHCHD4-203ENST00000420103 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
CHCHD4-203ENST00000420103 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.6
CHCHD4-203ENST00000420103 WASHC2CQ9Y4E1 1318 aa18.81■□□□□ 0.6
CHCHD4-203ENST00000420103 SHANK2Q9UPX8 1470 aa18.81■□□□□ 0.6
CHCHD4-203ENST00000420103 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
CHCHD4-203ENST00000420103 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
CHCHD4-203ENST00000420103 MIA2Q96PC5 1412 aa18.8■□□□□ 0.6
CHCHD4-203ENST00000420103 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
CHCHD4-203ENST00000420103 VWDEQ8N2E2 1590 aa18.78■□□□□ 0.6
CHCHD4-203ENST00000420103 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.6
CHCHD4-203ENST00000420103 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.59
CHCHD4-203ENST00000420103 LOC105371045A0A1W2PR82 267 aa18.76■□□□□ 0.59
CHCHD4-203ENST00000420103 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
CHCHD4-203ENST00000420103 CPS1P31327 1500 aa18.74■□□□□ 0.59
CHCHD4-203ENST00000420103 RSPH4AQ5TD94 716 aa18.74■□□□□ 0.59
CHCHD4-203ENST00000420103 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
CHCHD4-203ENST00000420103 UGGT1Q9NYU2 1555 aa18.73■□□□□ 0.59
CHCHD4-203ENST00000420103 TOM1O60784 492 aa18.73■□□□□ 0.59
CHCHD4-203ENST00000420103 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
CHCHD4-203ENST00000420103 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
CHCHD4-203ENST00000420103 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
CHCHD4-203ENST00000420103 MED14O60244 1454 aa18.72■□□□□ 0.59
CHCHD4-203ENST00000420103 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
CHCHD4-203ENST00000420103 ABCC3O15438 1527 aa18.71■□□□□ 0.59
CHCHD4-203ENST00000420103 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
CHCHD4-203ENST00000420103 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
CHCHD4-203ENST00000420103 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
CHCHD4-203ENST00000420103 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
CHCHD4-203ENST00000420103 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
CHCHD4-203ENST00000420103 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
CHCHD4-203ENST00000420103 DEPDC5O75140 1603 aa18.68■□□□□ 0.58
CHCHD4-203ENST00000420103 MROH1Q8NDA8 1641 aa18.68■□□□□ 0.58
CHCHD4-203ENST00000420103 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
CHCHD4-203ENST00000420103 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
CHCHD4-203ENST00000420103 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
CHCHD4-203ENST00000420103 LRRC7Q96NW7 1537 aa18.66■□□□□ 0.58
CHCHD4-203ENST00000420103 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
CHCHD4-203ENST00000420103 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
CHCHD4-203ENST00000420103 LTKP29376 864 aa18.64■□□□□ 0.57
CHCHD4-203ENST00000420103 CEP152O94986 1710 aa18.6■□□□□ 0.57
CHCHD4-203ENST00000420103 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
CHCHD4-203ENST00000420103 CFAP65Q6ZU64 1925 aaKnown RBP18.59■□□□□ 0.57
CHCHD4-203ENST00000420103 UBR1Q8IWV7 1749 aa18.58■□□□□ 0.57
CHCHD4-203ENST00000420103 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
CHCHD4-203ENST00000420103 EIF2AK4Q9P2K8 1649 aaKnown RBP18.57■□□□□ 0.56
CHCHD4-203ENST00000420103 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 TXNDC2Q86VQ3 553 aa18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 ARHGAP23Q9P227 1491 aa18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 ABCC5O15440 1437 aa18.56■□□□□ 0.56
CHCHD4-203ENST00000420103 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
CHCHD4-203ENST00000420103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.562e-7■■□□□ 13.3
CHCHD4-203ENST00000420103 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
CHCHD4-203ENST00000420103 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
CHCHD4-203ENST00000420103 SLIT1O75093 1534 aa18.53■□□□□ 0.56
CHCHD4-203ENST00000420103 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
CHCHD4-203ENST00000420103 SYNMO15061 1565 aa18.51■□□□□ 0.55
CHCHD4-203ENST00000420103 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
CHCHD4-203ENST00000420103 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
CHCHD4-203ENST00000420103 PRDM15P57071 1507 aaPredicted RBP18.5■□□□□ 0.55
CHCHD4-203ENST00000420103 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
CHCHD4-203ENST00000420103 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
CHCHD4-203ENST00000420103 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
CHCHD4-203ENST00000420103 IDI1Q13907 227 aa18.48■□□□□ 0.55
CHCHD4-203ENST00000420103 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
CHCHD4-203ENST00000420103 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
CHCHD4-203ENST00000420103 DAPK1P53355 1430 aa18.46■□□□□ 0.55
CHCHD4-203ENST00000420103 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
CHCHD4-203ENST00000420103 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
CHCHD4-203ENST00000420103 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
CHCHD4-203ENST00000420103 EID1Q9Y6B2 187 aa18.44■□□□□ 0.54
CHCHD4-203ENST00000420103 TET3O43151 1660 aa18.41■□□□□ 0.54
CHCHD4-203ENST00000420103 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
CHCHD4-203ENST00000420103 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CHCHD4-203ENST00000420103 KCNA6P17658 529 aa18.4■□□□□ 0.54
CHCHD4-203ENST00000420103 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
CHCHD4-203ENST00000420103 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
CHCHD4-203ENST00000420103 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.54
CHCHD4-203ENST00000420103 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.54
CHCHD4-203ENST00000420103 NOS1P29475 1434 aa18.39■□□□□ 0.53
CHCHD4-203ENST00000420103 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
CHCHD4-203ENST00000420103 KANK1Q14678 1352 aa18.37■□□□□ 0.53
CHCHD4-203ENST00000420103 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
CHCHD4-203ENST00000420103 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
CHCHD4-203ENST00000420103 APLP2Q06481 763 aa18.32■□□□□ 0.52
CHCHD4-203ENST00000420103 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
CHCHD4-203ENST00000420103 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
CHCHD4-203ENST00000420103 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
CHCHD4-203ENST00000420103 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
CHCHD4-203ENST00000420103 SLC52A1Q9NWF4 448 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms