RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
CHCHD4-203ENST00000420103 ABCC9O60706 1549 aa27.14■■□□□ 1.94
CHCHD4-203ENST00000420103 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
CHCHD4-203ENST00000420103 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
CHCHD4-203ENST00000420103 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
CHCHD4-203ENST00000420103 NACADO15069 1562 aa25.34■■□□□ 1.65
CHCHD4-203ENST00000420103 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
CHCHD4-203ENST00000420103 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
CHCHD4-203ENST00000420103 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
CHCHD4-203ENST00000420103 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
CHCHD4-203ENST00000420103 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
CHCHD4-203ENST00000420103 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
CHCHD4-203ENST00000420103 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
CHCHD4-203ENST00000420103 SCRIBQ14160 1630 aa24.45■■□□□ 1.5
CHCHD4-203ENST00000420103 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
CHCHD4-203ENST00000420103 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
CHCHD4-203ENST00000420103 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
CHCHD4-203ENST00000420103 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.48
CHCHD4-203ENST00000420103 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
CHCHD4-203ENST00000420103 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
CHCHD4-203ENST00000420103 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
CHCHD4-203ENST00000420103 CUX2O14529 1486 aa23.36■■□□□ 1.33
CHCHD4-203ENST00000420103 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
CHCHD4-203ENST00000420103 NESP48681 1621 aa23.28■■□□□ 1.32
CHCHD4-203ENST00000420103 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
CHCHD4-203ENST00000420103 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
CHCHD4-203ENST00000420103 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
CHCHD4-203ENST00000420103 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
CHCHD4-203ENST00000420103 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
CHCHD4-203ENST00000420103 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
CHCHD4-203ENST00000420103 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
CHCHD4-203ENST00000420103 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
CHCHD4-203ENST00000420103 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
CHCHD4-203ENST00000420103 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
CHCHD4-203ENST00000420103 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
CHCHD4-203ENST00000420103 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
CHCHD4-203ENST00000420103 WIZO95785 1651 aa22.7■■□□□ 1.22
CHCHD4-203ENST00000420103 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
CHCHD4-203ENST00000420103 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
CHCHD4-203ENST00000420103 WDR62O43379 1518 aa22.61■■□□□ 1.21
CHCHD4-203ENST00000420103 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
CHCHD4-203ENST00000420103 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
CHCHD4-203ENST00000420103 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
CHCHD4-203ENST00000420103 CFTRP13569 1480 aa22.45■■□□□ 1.18
CHCHD4-203ENST00000420103 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
CHCHD4-203ENST00000420103 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
CHCHD4-203ENST00000420103 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
CHCHD4-203ENST00000420103 ZNF608Q9ULD9 1512 aaPredicted RBP22.17■■□□□ 1.14
CHCHD4-203ENST00000420103 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
CHCHD4-203ENST00000420103 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
CHCHD4-203ENST00000420103 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
CHCHD4-203ENST00000420103 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
CHCHD4-203ENST00000420103 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
CHCHD4-203ENST00000420103 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
CHCHD4-203ENST00000420103 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
CHCHD4-203ENST00000420103 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
CHCHD4-203ENST00000420103 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
CHCHD4-203ENST00000420103 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.1
CHCHD4-203ENST00000420103 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
CHCHD4-203ENST00000420103 CYB5RLQ6IPT4 315 aa21.88■■□□□ 1.09
CHCHD4-203ENST00000420103 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
CHCHD4-203ENST00000420103 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
CHCHD4-203ENST00000420103 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
CHCHD4-203ENST00000420103 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
CHCHD4-203ENST00000420103 FBLN2P98095 1184 aa21.8■■□□□ 1.08
CHCHD4-203ENST00000420103 CHD1O14646 1710 aa21.8■■□□□ 1.08
CHCHD4-203ENST00000420103 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
CHCHD4-203ENST00000420103 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
CHCHD4-203ENST00000420103 SOGA1O94964 1423 aa21.72■■□□□ 1.07
CHCHD4-203ENST00000420103 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
CHCHD4-203ENST00000420103 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.06
CHCHD4-203ENST00000420103 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
CHCHD4-203ENST00000420103 CUX1P39880 1505 aa21.62■■□□□ 1.05
CHCHD4-203ENST00000420103 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
CHCHD4-203ENST00000420103 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
CHCHD4-203ENST00000420103 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
CHCHD4-203ENST00000420103 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
CHCHD4-203ENST00000420103 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
CHCHD4-203ENST00000420103 SYNJ2O15056 1496 aa21.46■■□□□ 1.03
CHCHD4-203ENST00000420103 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
CHCHD4-203ENST00000420103 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
CHCHD4-203ENST00000420103 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
CHCHD4-203ENST00000420103 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
CHCHD4-203ENST00000420103 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
CHCHD4-203ENST00000420103 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
CHCHD4-203ENST00000420103 SUPT5HO00267 1087 aaKnown RBP21.3■■□□□ 1
CHCHD4-203ENST00000420103 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
CHCHD4-203ENST00000420103 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
CHCHD4-203ENST00000420103 NUP160Q12769 1436 aa21.21■□□□□ 0.99
CHCHD4-203ENST00000420103 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
CHCHD4-203ENST00000420103 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
CHCHD4-203ENST00000420103 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
CHCHD4-203ENST00000420103 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
CHCHD4-203ENST00000420103 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
CHCHD4-203ENST00000420103 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
CHCHD4-203ENST00000420103 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
CHCHD4-203ENST00000420103 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
CHCHD4-203ENST00000420103 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
CHCHD4-203ENST00000420103 JPH4Q96JJ6 628 aa21.01■□□□□ 0.95
CHCHD4-203ENST00000420103 KIF13AQ9H1H9 1805 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms