RNA–Protein interactions for RNA: ENST00000416206.5

ERGIC3-206, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-206ENST00000416206 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
ERGIC3-206ENST00000416206 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
ERGIC3-206ENST00000416206 PZPP20742 1482 aa18.25■□□□□ 0.51
ERGIC3-206ENST00000416206 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
ERGIC3-206ENST00000416206 PKD2Q13563 968 aa18.24■□□□□ 0.51
ERGIC3-206ENST00000416206 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
ERGIC3-206ENST00000416206 RNF17Q9BXT8 1623 aaKnown RBP18.21■□□□□ 0.51
ERGIC3-206ENST00000416206 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
ERGIC3-206ENST00000416206 TNRQ92752 1358 aa18.18■□□□□ 0.5
ERGIC3-206ENST00000416206 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
ERGIC3-206ENST00000416206 SOCS7O14512 581 aa18.17■□□□□ 0.5
ERGIC3-206ENST00000416206 CPS1P31327 1500 aa18.16■□□□□ 0.5
ERGIC3-206ENST00000416206 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
ERGIC3-206ENST00000416206 EIF2AK4Q9P2K8 1649 aaKnown RBP18.16■□□□□ 0.5
ERGIC3-206ENST00000416206 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
ERGIC3-206ENST00000416206 VWDEQ8N2E2 1590 aa18.15■□□□□ 0.5
ERGIC3-206ENST00000416206 MROH1Q8NDA8 1641 aa18.15■□□□□ 0.5
ERGIC3-206ENST00000416206 KIF3BO15066 747 aa18.14■□□□□ 0.49
ERGIC3-206ENST00000416206 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
ERGIC3-206ENST00000416206 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
ERGIC3-206ENST00000416206 FBXO31Q5XUX0 539 aaPredicted RBP18.13■□□□□ 0.49
ERGIC3-206ENST00000416206 ABCC3O15438 1527 aa18.13■□□□□ 0.49
ERGIC3-206ENST00000416206 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
ERGIC3-206ENST00000416206 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
ERGIC3-206ENST00000416206 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
ERGIC3-206ENST00000416206 MED14O60244 1454 aa18.11■□□□□ 0.49
ERGIC3-206ENST00000416206 CEP152O94986 1710 aa18.11■□□□□ 0.49
ERGIC3-206ENST00000416206 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
ERGIC3-206ENST00000416206 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
ERGIC3-206ENST00000416206 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
ERGIC3-206ENST00000416206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
ERGIC3-206ENST00000416206 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
ERGIC3-206ENST00000416206 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.49
ERGIC3-206ENST00000416206 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
ERGIC3-206ENST00000416206 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.48
ERGIC3-206ENST00000416206 CROCC2H7BZ55 1655 aa18.08■□□□□ 0.48
ERGIC3-206ENST00000416206 SYNMO15061 1565 aa18.07■□□□□ 0.48
ERGIC3-206ENST00000416206 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
ERGIC3-206ENST00000416206 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
ERGIC3-206ENST00000416206 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
ERGIC3-206ENST00000416206 MAP3K1Q13233 1512 aa18.05■□□□□ 0.48
ERGIC3-206ENST00000416206 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
ERGIC3-206ENST00000416206 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
ERGIC3-206ENST00000416206 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
ERGIC3-206ENST00000416206 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.47
ERGIC3-206ENST00000416206 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
ERGIC3-206ENST00000416206 TSPY4P0CV99 314 aa18■□□□□ 0.47
ERGIC3-206ENST00000416206 TSPY10P0CW01 314 aa18■□□□□ 0.47
ERGIC3-206ENST00000416206 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
ERGIC3-206ENST00000416206 HSPA1LP34931 641 aa17.99■□□□□ 0.47
ERGIC3-206ENST00000416206 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
ERGIC3-206ENST00000416206 PIP4K2BP78356 416 aa17.97■□□□□ 0.47
ERGIC3-206ENST00000416206 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
ERGIC3-206ENST00000416206 ARHGAP23Q9P227 1491 aa17.96■□□□□ 0.47
ERGIC3-206ENST00000416206 TOM1O60784 492 aa17.96■□□□□ 0.47
ERGIC3-206ENST00000416206 KANK4Q5T7N3 995 aaPredicted RBP17.96■□□□□ 0.47
ERGIC3-206ENST00000416206 SLIT1O75093 1534 aa17.96■□□□□ 0.47
ERGIC3-206ENST00000416206 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
ERGIC3-206ENST00000416206 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
ERGIC3-206ENST00000416206 PTPN23Q9H3S7 1636 aa17.95■□□□□ 0.46
ERGIC3-206ENST00000416206 ERBINQ96RT1 1412 aa17.95■□□□□ 0.46
ERGIC3-206ENST00000416206 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
ERGIC3-206ENST00000416206 ARHGAP31Q2M1Z3 1444 aa17.94■□□□□ 0.46
ERGIC3-206ENST00000416206 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
ERGIC3-206ENST00000416206 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
ERGIC3-206ENST00000416206 KDM5AP29375 1690 aaKnown RBP17.92■□□□□ 0.46
ERGIC3-206ENST00000416206 ABCC5O15440 1437 aa17.91■□□□□ 0.46
ERGIC3-206ENST00000416206 DAPK1P53355 1430 aa17.88■□□□□ 0.45
ERGIC3-206ENST00000416206 LMTK2Q8IWU2 1503 aa17.88■□□□□ 0.45
ERGIC3-206ENST00000416206 FGD6Q6ZV73 1430 aa17.85■□□□□ 0.45
ERGIC3-206ENST00000416206 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
ERGIC3-206ENST00000416206 LTKP29376 864 aa17.84■□□□□ 0.45
ERGIC3-206ENST00000416206 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
ERGIC3-206ENST00000416206 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
ERGIC3-206ENST00000416206 NWD1Q149M9 1564 aa17.8■□□□□ 0.44
ERGIC3-206ENST00000416206 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
ERGIC3-206ENST00000416206 TET3O43151 1660 aa17.8■□□□□ 0.44
ERGIC3-206ENST00000416206 ADGRL2O95490 1459 aa17.78■□□□□ 0.44
ERGIC3-206ENST00000416206 TXNDC2Q86VQ3 553 aa17.78■□□□□ 0.44
ERGIC3-206ENST00000416206 NOS1P29475 1434 aa17.78■□□□□ 0.44
ERGIC3-206ENST00000416206 KANK1Q14678 1352 aa17.78■□□□□ 0.44
ERGIC3-206ENST00000416206 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-206ENST00000416206 ROBO1Q9Y6N7 1651 aa17.76■□□□□ 0.43
ERGIC3-206ENST00000416206 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
ERGIC3-206ENST00000416206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.432e-10■■□□□ 13.5
ERGIC3-206ENST00000416206 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
ERGIC3-206ENST00000416206 MYO5BQ9ULV0 1848 aa17.75■□□□□ 0.43
ERGIC3-206ENST00000416206 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
ERGIC3-206ENST00000416206 EID1Q9Y6B2 187 aa17.74■□□□□ 0.43
ERGIC3-206ENST00000416206 NKTRP30414 1462 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-206ENST00000416206 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
ERGIC3-206ENST00000416206 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
ERGIC3-206ENST00000416206 RPRD2Q5VT52 1461 aaKnown RBP17.71■□□□□ 0.43
ERGIC3-206ENST00000416206 IDI1Q13907 227 aa17.71■□□□□ 0.43
ERGIC3-206ENST00000416206 UNC13BO14795 1591 aa17.7■□□□□ 0.42
ERGIC3-206ENST00000416206 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
ERGIC3-206ENST00000416206 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
ERGIC3-206ENST00000416206 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
ERGIC3-206ENST00000416206 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
ERGIC3-206ENST00000416206 CHD2O14647 1828 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms