RNA–Protein interactions for RNA: ENST00000416206.5

ERGIC3-206, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-206ENST00000416206 NISCHQ9Y2I1 1504 aa28.85■■■□□ 2.21
ERGIC3-206ENST00000416206 ABCC9O60706 1549 aa26.08■■□□□ 1.77
ERGIC3-206ENST00000416206 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
ERGIC3-206ENST00000416206 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
ERGIC3-206ENST00000416206 NACADO15069 1562 aa24.59■■□□□ 1.53
ERGIC3-206ENST00000416206 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
ERGIC3-206ENST00000416206 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
ERGIC3-206ENST00000416206 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
ERGIC3-206ENST00000416206 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
ERGIC3-206ENST00000416206 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.465e-10■■□□□ 14.5
ERGIC3-206ENST00000416206 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
ERGIC3-206ENST00000416206 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
ERGIC3-206ENST00000416206 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
ERGIC3-206ENST00000416206 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
ERGIC3-206ENST00000416206 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
ERGIC3-206ENST00000416206 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
ERGIC3-206ENST00000416206 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
ERGIC3-206ENST00000416206 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
ERGIC3-206ENST00000416206 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
ERGIC3-206ENST00000416206 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
ERGIC3-206ENST00000416206 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
ERGIC3-206ENST00000416206 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
ERGIC3-206ENST00000416206 CUX2O14529 1486 aa22.58■■□□□ 1.2
ERGIC3-206ENST00000416206 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
ERGIC3-206ENST00000416206 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
ERGIC3-206ENST00000416206 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
ERGIC3-206ENST00000416206 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
ERGIC3-206ENST00000416206 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
ERGIC3-206ENST00000416206 NESP48681 1621 aa22.39■■□□□ 1.17
ERGIC3-206ENST00000416206 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
ERGIC3-206ENST00000416206 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
ERGIC3-206ENST00000416206 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
ERGIC3-206ENST00000416206 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
ERGIC3-206ENST00000416206 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
ERGIC3-206ENST00000416206 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
ERGIC3-206ENST00000416206 WIZO95785 1651 aa21.98■■□□□ 1.11
ERGIC3-206ENST00000416206 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
ERGIC3-206ENST00000416206 WDR62O43379 1518 aa21.91■■□□□ 1.1
ERGIC3-206ENST00000416206 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
ERGIC3-206ENST00000416206 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
ERGIC3-206ENST00000416206 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
ERGIC3-206ENST00000416206 CFTRP13569 1480 aa21.71■■□□□ 1.07
ERGIC3-206ENST00000416206 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
ERGIC3-206ENST00000416206 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
ERGIC3-206ENST00000416206 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
ERGIC3-206ENST00000416206 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
ERGIC3-206ENST00000416206 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
ERGIC3-206ENST00000416206 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
ERGIC3-206ENST00000416206 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
ERGIC3-206ENST00000416206 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
ERGIC3-206ENST00000416206 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
ERGIC3-206ENST00000416206 TOPBP1Q92547 1522 aa21.32■■□□□ 1
ERGIC3-206ENST00000416206 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
ERGIC3-206ENST00000416206 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
ERGIC3-206ENST00000416206 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
ERGIC3-206ENST00000416206 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
ERGIC3-206ENST00000416206 DNMBPQ6XZF7 1577 aa21.27■□□□□ 0.99
ERGIC3-206ENST00000416206 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
ERGIC3-206ENST00000416206 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
ERGIC3-206ENST00000416206 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
ERGIC3-206ENST00000416206 CHD1O14646 1710 aa21.17■□□□□ 0.98
ERGIC3-206ENST00000416206 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
ERGIC3-206ENST00000416206 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.962e-7■■■■□ 24
ERGIC3-206ENST00000416206 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
ERGIC3-206ENST00000416206 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
ERGIC3-206ENST00000416206 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
ERGIC3-206ENST00000416206 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
ERGIC3-206ENST00000416206 CUX1P39880 1505 aa20.92■□□□□ 0.94
ERGIC3-206ENST00000416206 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
ERGIC3-206ENST00000416206 CLASP1Q7Z460 1538 aa20.91■□□□□ 0.94
ERGIC3-206ENST00000416206 SOGA1O94964 1423 aa20.9■□□□□ 0.94
ERGIC3-206ENST00000416206 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
ERGIC3-206ENST00000416206 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
ERGIC3-206ENST00000416206 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
ERGIC3-206ENST00000416206 FBLN2P98095 1184 aa20.83■□□□□ 0.93
ERGIC3-206ENST00000416206 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
ERGIC3-206ENST00000416206 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
ERGIC3-206ENST00000416206 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
ERGIC3-206ENST00000416206 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
ERGIC3-206ENST00000416206 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
ERGIC3-206ENST00000416206 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
ERGIC3-206ENST00000416206 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
ERGIC3-206ENST00000416206 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
ERGIC3-206ENST00000416206 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
ERGIC3-206ENST00000416206 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
ERGIC3-206ENST00000416206 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
ERGIC3-206ENST00000416206 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
ERGIC3-206ENST00000416206 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
ERGIC3-206ENST00000416206 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
ERGIC3-206ENST00000416206 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
ERGIC3-206ENST00000416206 NUP160Q12769 1436 aa20.51■□□□□ 0.87
ERGIC3-206ENST00000416206 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
ERGIC3-206ENST00000416206 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
ERGIC3-206ENST00000416206 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
ERGIC3-206ENST00000416206 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
ERGIC3-206ENST00000416206 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
ERGIC3-206ENST00000416206 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
ERGIC3-206ENST00000416206 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
ERGIC3-206ENST00000416206 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
ERGIC3-206ENST00000416206 ADCY10Q96PN6 1610 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms