RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 NEURL4Q96JN8 1562 aa27.31■■□□□ 1.96
SCRN1-203ENST00000409570 FAM135AQ9P2D6 1515 aa27.28■■□□□ 1.96
SCRN1-203ENST00000409570 PZPP20742 1482 aa27.28■■□□□ 1.96
SCRN1-203ENST00000409570 TNRQ92752 1358 aa27.28■■□□□ 1.96
SCRN1-203ENST00000409570 FBXO31Q5XUX0 539 aaPredicted RBP27.28■■□□□ 1.96
SCRN1-203ENST00000409570 KDM5DQ9BY66 1539 aa27.27■■□□□ 1.96
SCRN1-203ENST00000409570 CCDC141Q6ZP82 1450 aa27.27■■□□□ 1.96
SCRN1-203ENST00000409570 KIF3BO15066 747 aa27.27■■□□□ 1.96
SCRN1-203ENST00000409570 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
SCRN1-203ENST00000409570 CPS1P31327 1500 aa27.24■■□□□ 1.95
SCRN1-203ENST00000409570 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
SCRN1-203ENST00000409570 SHANK2Q9UPX8 1470 aa27.22■■□□□ 1.95
SCRN1-203ENST00000409570 WASHC2CQ9Y4E1 1318 aa27.18■■□□□ 1.94
SCRN1-203ENST00000409570 RSPH4AQ5TD94 716 aa27.18■■□□□ 1.94
SCRN1-203ENST00000409570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.94
SCRN1-203ENST00000409570 ARHGEF5Q12774 1597 aa27.18■■□□□ 1.94
SCRN1-203ENST00000409570 VWDEQ8N2E2 1590 aa27.18■■□□□ 1.94
SCRN1-203ENST00000409570 HSPA1LP34931 641 aa27.17■■□□□ 1.94
SCRN1-203ENST00000409570 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
SCRN1-203ENST00000409570 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
SCRN1-203ENST00000409570 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
SCRN1-203ENST00000409570 UGGT1Q9NYU2 1555 aa27.15■■□□□ 1.94
SCRN1-203ENST00000409570 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
SCRN1-203ENST00000409570 SCAF1Q9H7N4 1312 aaKnown RBP27.15■■□□□ 1.94
SCRN1-203ENST00000409570 MED1Q15648 1581 aaPredicted RBP27.14■■□□□ 1.94
SCRN1-203ENST00000409570 TOM1O60784 492 aa27.14■■□□□ 1.94
SCRN1-203ENST00000409570 PIP4K2BP78356 416 aa27.14■■□□□ 1.94
SCRN1-203ENST00000409570 MED14O60244 1454 aa27.13■■□□□ 1.93
SCRN1-203ENST00000409570 THEMISQ8N1K5 641 aaPredicted RBP27.13■■□□□ 1.93
SCRN1-203ENST00000409570 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
SCRN1-203ENST00000409570 NPHP4O75161 1426 aaPredicted RBP27.11■■□□□ 1.93
SCRN1-203ENST00000409570 IQGAP1P46940 1657 aa27.11■■□□□ 1.93
SCRN1-203ENST00000409570 ALKQ9UM73 1620 aa27.1■■□□□ 1.93
SCRN1-203ENST00000409570 STRCP1A6NGW2 1772 aa27.09■■□□□ 1.93
SCRN1-203ENST00000409570 ZC3H13Q5T200 1668 aaKnown RBP27.08■■□□□ 1.93
SCRN1-203ENST00000409570 CFAP65Q6ZU64 1925 aaKnown RBP27.08■■□□□ 1.93
SCRN1-203ENST00000409570 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
SCRN1-203ENST00000409570 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
SCRN1-203ENST00000409570 ABCC3O15438 1527 aa27.06■■□□□ 1.92
SCRN1-203ENST00000409570 MAST1Q9Y2H9 1570 aa27.06■■□□□ 1.92
SCRN1-203ENST00000409570 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
SCRN1-203ENST00000409570 CEP152O94986 1710 aa27.02■■□□□ 1.92
SCRN1-203ENST00000409570 MROH1Q8NDA8 1641 aa27.01■■□□□ 1.92
SCRN1-203ENST00000409570 ERVK-7P63135 1459 aa27■■□□□ 1.91
SCRN1-203ENST00000409570 LRRC9Q6ZRR7 1453 aa26.99■■□□□ 1.91
SCRN1-203ENST00000409570 UBR1Q8IWV7 1749 aa26.99■■□□□ 1.91
SCRN1-203ENST00000409570 LRRC7Q96NW7 1537 aa26.97■■□□□ 1.91
SCRN1-203ENST00000409570 SYNMO15061 1565 aa26.97■■□□□ 1.91
SCRN1-203ENST00000409570 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
SCRN1-203ENST00000409570 DUOX2Q9NRD8 1548 aa26.89■■□□□ 1.89
SCRN1-203ENST00000409570 XIRP1Q702N8 1843 aaKnown RBP26.88■■□□□ 1.89
SCRN1-203ENST00000409570 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
SCRN1-203ENST00000409570 MYOM3Q5VTT5 1437 aa26.87■■□□□ 1.89
SCRN1-203ENST00000409570 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
SCRN1-203ENST00000409570 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
SCRN1-203ENST00000409570 ARHGAP23Q9P227 1491 aa26.86■■□□□ 1.89
SCRN1-203ENST00000409570 SLIT1O75093 1534 aa26.85■■□□□ 1.89
SCRN1-203ENST00000409570 MAP3K1Q13233 1512 aa26.85■■□□□ 1.89
SCRN1-203ENST00000409570 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
SCRN1-203ENST00000409570 LTKP29376 864 aa26.83■■□□□ 1.89
SCRN1-203ENST00000409570 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
SCRN1-203ENST00000409570 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
SCRN1-203ENST00000409570 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
SCRN1-203ENST00000409570 PIK3C2BO00750 1634 aa26.79■■□□□ 1.88
SCRN1-203ENST00000409570 TXNDC2Q86VQ3 553 aa26.79■■□□□ 1.88
SCRN1-203ENST00000409570 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
SCRN1-203ENST00000409570 ERBINQ96RT1 1412 aa26.76■■□□□ 1.87
SCRN1-203ENST00000409570 ABCC5O15440 1437 aa26.74■■□□□ 1.87
SCRN1-203ENST00000409570 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
SCRN1-203ENST00000409570 PTPN23Q9H3S7 1636 aa26.73■■□□□ 1.87
SCRN1-203ENST00000409570 KDM5AP29375 1690 aaKnown RBP26.72■■□□□ 1.87
SCRN1-203ENST00000409570 RRP7BPQ9NSQ0 103 aa26.71■■□□□ 1.87
SCRN1-203ENST00000409570 EID1Q9Y6B2 187 aa26.71■■□□□ 1.87
SCRN1-203ENST00000409570 TMEM2Q9UHN6 1383 aa26.71■■□□□ 1.87
SCRN1-203ENST00000409570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.69■■□□□ 1.86
SCRN1-203ENST00000409570 RGS17Q9UGC6 210 aaPredicted RBP26.68■■□□□ 1.86
SCRN1-203ENST00000409570 DAPK1P53355 1430 aa26.66■■□□□ 1.86
SCRN1-203ENST00000409570 EFCAB6Q5THR3 1501 aa26.66■■□□□ 1.86
SCRN1-203ENST00000409570 LMTK2Q8IWU2 1503 aa26.65■■□□□ 1.86
SCRN1-203ENST00000409570 FAM135BQ49AJ0 1406 aa26.65■■□□□ 1.86
SCRN1-203ENST00000409570 KANK1Q14678 1352 aa26.64■■□□□ 1.86
SCRN1-203ENST00000409570 TET3O43151 1660 aa26.63■■□□□ 1.85
SCRN1-203ENST00000409570 IDI1Q13907 227 aa26.63■■□□□ 1.85
SCRN1-203ENST00000409570 STAG3Q9UJ98 1225 aa26.63■■□□□ 1.85
SCRN1-203ENST00000409570 TMEM94Q12767 1356 aa26.62■■□□□ 1.85
SCRN1-203ENST00000409570 ROBO1Q9Y6N7 1651 aa26.6■■□□□ 1.85
SCRN1-203ENST00000409570 KCNA6P17658 529 aa26.59■■□□□ 1.85
SCRN1-203ENST00000409570 FGD6Q6ZV73 1430 aa26.58■■□□□ 1.85
SCRN1-203ENST00000409570 NOS1P29475 1434 aa26.57■■□□□ 1.84
SCRN1-203ENST00000409570 ADGRB3O60242 1522 aa26.56■■□□□ 1.84
SCRN1-203ENST00000409570 NWD1Q149M9 1564 aa26.56■■□□□ 1.84
SCRN1-203ENST00000409570 SLC26A8Q96RN1 970 aa26.56■■□□□ 1.84
SCRN1-203ENST00000409570 ANKRD30AQ9BXX3 1397 aa26.56■■□□□ 1.84
SCRN1-203ENST00000409570 CHIC2Q9UKJ5 165 aa26.55■■□□□ 1.84
SCRN1-203ENST00000409570 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
SCRN1-203ENST00000409570 PROSER2Q86WR7 435 aaPredicted RBP26.54■■□□□ 1.84
SCRN1-203ENST00000409570 RBM33Q96EV2 1170 aaKnown RBP26.53■■□□□ 1.84
SCRN1-203ENST00000409570 NKTRP30414 1462 aaKnown RBP26.52■■□□□ 1.84
SCRN1-203ENST00000409570 POTEAQ6S8J7 498 aa26.5■■□□□ 1.83
SCRN1-203ENST00000409570 CHD2O14647 1828 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms