RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
SCRN1-203ENST00000409570 ABCC9O60706 1549 aa39.17■■■■□ 3.86
SCRN1-203ENST00000409570 CCDC180Q9P1Z9 1646 aa38.87■■■■□ 3.81
SCRN1-203ENST00000409570 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
SCRN1-203ENST00000409570 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
SCRN1-203ENST00000409570 NACADO15069 1562 aa36.79■■■■□ 3.48
SCRN1-203ENST00000409570 DCAF8L2P0C7V8 631 aa36.44■■■■□ 3.42
SCRN1-203ENST00000409570 UNC13AQ9UPW8 1703 aa36.42■■■■□ 3.42
SCRN1-203ENST00000409570 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.41
SCRN1-203ENST00000409570 MYO15BQ96JP2 1530 aa36.16■■■■□ 3.38
SCRN1-203ENST00000409570 BICRAQ9NZM4 1560 aa36.11■■■■□ 3.37
SCRN1-203ENST00000409570 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
SCRN1-203ENST00000409570 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
SCRN1-203ENST00000409570 SHROOM4Q9ULL8 1493 aa35.52■■■■□ 3.28
SCRN1-203ENST00000409570 CC2D2AQ9P2K1 1620 aa35.4■■■■□ 3.26
SCRN1-203ENST00000409570 SCRIBQ14160 1630 aa35.36■■■■□ 3.25
SCRN1-203ENST00000409570 CECR2Q9BXF3 1484 aa35.31■■■■□ 3.24
SCRN1-203ENST00000409570 EIF4G1Q04637 1599 aaKnown RBP35.22■■■■□ 3.23
SCRN1-203ENST00000409570 DNAJC5Q9H3Z4 198 aa34.29■■■■□ 3.08
SCRN1-203ENST00000409570 NCAPD3P42695 1498 aa33.95■■■■□ 3.03
SCRN1-203ENST00000409570 CUX2O14529 1486 aa33.9■■■■□ 3.02
SCRN1-203ENST00000409570 ERCC6Q03468 1493 aa33.81■■■■□ 3
SCRN1-203ENST00000409570 ATAD2BQ9ULI0 1458 aa33.81■■■■□ 3
SCRN1-203ENST00000409570 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
SCRN1-203ENST00000409570 HMGXB3Q12766 1538 aa33.69■■■□□ 2.98
SCRN1-203ENST00000409570 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
SCRN1-203ENST00000409570 NESP48681 1621 aa33.56■■■□□ 2.96
SCRN1-203ENST00000409570 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
SCRN1-203ENST00000409570 BAZ1BQ9UIG0 1483 aaKnown RBP33.44■■■□□ 2.94
SCRN1-203ENST00000409570 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
SCRN1-203ENST00000409570 THOC2Q8NI27 1593 aaKnown RBP33.33■■■□□ 2.93
SCRN1-203ENST00000409570 LAMC3Q9Y6N6 1575 aa33.27■■■□□ 2.92
SCRN1-203ENST00000409570 MROH2BQ7Z745 1585 aa33.21■■■□□ 2.91
SCRN1-203ENST00000409570 KIF21AQ7Z4S6 1674 aa33.18■■■□□ 2.9
SCRN1-203ENST00000409570 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
SCRN1-203ENST00000409570 CADPSQ9ULU8 1353 aa32.89■■■□□ 2.86
SCRN1-203ENST00000409570 WIZO95785 1651 aa32.82■■■□□ 2.84
SCRN1-203ENST00000409570 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
SCRN1-203ENST00000409570 WDR62O43379 1518 aa32.76■■■□□ 2.83
SCRN1-203ENST00000409570 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
SCRN1-203ENST00000409570 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
SCRN1-203ENST00000409570 FANCD2Q9BXW9 1451 aa32.53■■■□□ 2.8
SCRN1-203ENST00000409570 CFTRP13569 1480 aa32.45■■■□□ 2.79
SCRN1-203ENST00000409570 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
SCRN1-203ENST00000409570 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
SCRN1-203ENST00000409570 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
SCRN1-203ENST00000409570 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
SCRN1-203ENST00000409570 PRDM2Q13029 1718 aa32.22■■■□□ 2.75
SCRN1-203ENST00000409570 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
SCRN1-203ENST00000409570 ZNF608Q9ULD9 1512 aaPredicted RBP31.96■■■□□ 2.71
SCRN1-203ENST00000409570 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
SCRN1-203ENST00000409570 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
SCRN1-203ENST00000409570 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
SCRN1-203ENST00000409570 IFT140Q96RY7 1462 aa31.95■■■□□ 2.7
SCRN1-203ENST00000409570 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
SCRN1-203ENST00000409570 EIF4G3O43432 1585 aaKnown RBP31.79■■■□□ 2.68
SCRN1-203ENST00000409570 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
SCRN1-203ENST00000409570 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
SCRN1-203ENST00000409570 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
SCRN1-203ENST00000409570 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
SCRN1-203ENST00000409570 CHD1O14646 1710 aa31.67■■■□□ 2.66
SCRN1-203ENST00000409570 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.65
SCRN1-203ENST00000409570 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
SCRN1-203ENST00000409570 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
SCRN1-203ENST00000409570 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
SCRN1-203ENST00000409570 RAD54L2Q9Y4B4 1467 aa31.43■■■□□ 2.62
SCRN1-203ENST00000409570 FBLN2P98095 1184 aa31.42■■■□□ 2.62
SCRN1-203ENST00000409570 SOGA1O94964 1423 aa31.36■■■□□ 2.61
SCRN1-203ENST00000409570 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
SCRN1-203ENST00000409570 WDR97A6NE52 1622 aa31.3■■■□□ 2.6
SCRN1-203ENST00000409570 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
SCRN1-203ENST00000409570 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
SCRN1-203ENST00000409570 TRHP20396 242 aaPredicted RBP31.27■■■□□ 2.6
SCRN1-203ENST00000409570 CLASP1Q7Z460 1538 aa31.25■■■□□ 2.59
SCRN1-203ENST00000409570 CUX1P39880 1505 aa31.22■■■□□ 2.59
SCRN1-203ENST00000409570 MAGI1Q96QZ7 1491 aaPredicted RBP31.18■■■□□ 2.58
SCRN1-203ENST00000409570 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
SCRN1-203ENST00000409570 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
SCRN1-203ENST00000409570 GRIN2BQ13224 1484 aa31.14■■■□□ 2.57
SCRN1-203ENST00000409570 SYNJ2O15056 1496 aa31.08■■■□□ 2.57
SCRN1-203ENST00000409570 PBRM1Q86U86 1689 aa31.07■■■□□ 2.56
SCRN1-203ENST00000409570 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
SCRN1-203ENST00000409570 ABCA5Q8WWZ7 1642 aa30.94■■■□□ 2.54
SCRN1-203ENST00000409570 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
SCRN1-203ENST00000409570 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
SCRN1-203ENST00000409570 GRIN2AQ12879 1464 aa30.75■■■□□ 2.51
SCRN1-203ENST00000409570 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
SCRN1-203ENST00000409570 CEP170Q5SW79 1584 aa30.69■■■□□ 2.5
SCRN1-203ENST00000409570 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
SCRN1-203ENST00000409570 NUP160Q12769 1436 aa30.66■■■□□ 2.5
SCRN1-203ENST00000409570 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
SCRN1-203ENST00000409570 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
SCRN1-203ENST00000409570 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
SCRN1-203ENST00000409570 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
SCRN1-203ENST00000409570 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
SCRN1-203ENST00000409570 FHAD1B1AJZ9 1412 aa30.56■■■□□ 2.48
SCRN1-203ENST00000409570 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
SCRN1-203ENST00000409570 KIF13AQ9H1H9 1805 aa30.46■■■□□ 2.47
SCRN1-203ENST00000409570 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
SCRN1-203ENST00000409570 JPH4Q96JJ6 628 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms