RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 CAMSAP2Q08AD1 1489 aa36.33■■■■□ 3.41
VLDLR-201ENST00000382096 NCOA2Q15596 1464 aa36.32■■■■□ 3.41
VLDLR-201ENST00000382096 KDM5DQ9BY66 1539 aa36.32■■■■□ 3.4
VLDLR-201ENST00000382096 PZPP20742 1482 aa36.27■■■■□ 3.4
VLDLR-201ENST00000382096 ARHGEF5Q12774 1597 aa36.26■■■■□ 3.39
VLDLR-201ENST00000382096 NEURL4Q96JN8 1562 aa36.25■■■■□ 3.39
VLDLR-201ENST00000382096 SOCS7O14512 581 aa36.24■■■■□ 3.39
VLDLR-201ENST00000382096 KIF3BO15066 747 aa36.23■■■■□ 3.39
VLDLR-201ENST00000382096 RSPH4AQ5TD94 716 aa36.23■■■■□ 3.39
VLDLR-201ENST00000382096 TNRQ92752 1358 aa36.23■■■■□ 3.39
VLDLR-201ENST00000382096 UBAP1LF5GYI3 381 aa36.21■■■■□ 3.39
VLDLR-201ENST00000382096 FBXO31Q5XUX0 539 aaPredicted RBP36.17■■■■□ 3.38
VLDLR-201ENST00000382096 RNF17Q9BXT8 1623 aaKnown RBP36.14■■■■□ 3.38
VLDLR-201ENST00000382096 WASHC2CQ9Y4E1 1318 aa36.13■■■■□ 3.37
VLDLR-201ENST00000382096 CPS1P31327 1500 aa36.13■■■■□ 3.37
VLDLR-201ENST00000382096 NLRP1Q9C000 1473 aa36.11■■■■□ 3.37
VLDLR-201ENST00000382096 ZC3H13Q5T200 1668 aaKnown RBP36.11■■■■□ 3.37
VLDLR-201ENST00000382096 MAST1Q9Y2H9 1570 aa36.1■■■■□ 3.37
VLDLR-201ENST00000382096 MIA2Q96PC5 1412 aa36.09■■■■□ 3.37
VLDLR-201ENST00000382096 DEPDC5O75140 1603 aa36.09■■■■□ 3.37
VLDLR-201ENST00000382096 UGGT1Q9NYU2 1555 aa36.08■■■■□ 3.37
VLDLR-201ENST00000382096 LOC105371045A0A1W2PR82 267 aa36.08■■■■□ 3.37
VLDLR-201ENST00000382096 SHANK2Q9UPX8 1470 aa36.07■■■■□ 3.37
VLDLR-201ENST00000382096 LRRC9Q6ZRR7 1453 aa36.06■■■■□ 3.36
VLDLR-201ENST00000382096 EIF2AK4Q9P2K8 1649 aaKnown RBP36.06■■■■□ 3.36
VLDLR-201ENST00000382096 TSPY4P0CV99 314 aa36.05■■■■□ 3.36
VLDLR-201ENST00000382096 TSPY10P0CW01 314 aa36.05■■■■□ 3.36
VLDLR-201ENST00000382096 VPS8Q8N3P4 1428 aa36.05■■■■□ 3.36
VLDLR-201ENST00000382096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.04■■■■□ 3.36
VLDLR-201ENST00000382096 VWDEQ8N2E2 1590 aa36.04■■■■□ 3.36
VLDLR-201ENST00000382096 MED14O60244 1454 aa36.03■■■■□ 3.36
VLDLR-201ENST00000382096 ABCC3O15438 1527 aa36.02■■■■□ 3.36
VLDLR-201ENST00000382096 THEMISQ8N1K5 641 aaPredicted RBP36.01■■■■□ 3.36
VLDLR-201ENST00000382096 ANKLE2Q86XL3 938 aa36■■■■□ 3.35
VLDLR-201ENST00000382096 IQGAP1P46940 1657 aa36■■■■□ 3.35
VLDLR-201ENST00000382096 MROH1Q8NDA8 1641 aa35.98■■■■□ 3.35
VLDLR-201ENST00000382096 NPHP4O75161 1426 aaPredicted RBP35.96■■■■□ 3.35
VLDLR-201ENST00000382096 MAP3K1Q13233 1512 aa35.95■■■■□ 3.35
VLDLR-201ENST00000382096 CEP152O94986 1710 aa35.94■■■■□ 3.34
VLDLR-201ENST00000382096 TOM1O60784 492 aa35.91■■■■□ 3.34
VLDLR-201ENST00000382096 ERVK-7P63135 1459 aa35.91■■■■□ 3.34
VLDLR-201ENST00000382096 STRCP1A6NGW2 1772 aa35.89■■■■□ 3.34
VLDLR-201ENST00000382096 MYOM3Q5VTT5 1437 aa35.89■■■■□ 3.34
VLDLR-201ENST00000382096 CFAP65Q6ZU64 1925 aaKnown RBP35.89■■■■□ 3.34
VLDLR-201ENST00000382096 ALKQ9UM73 1620 aa35.88■■■■□ 3.33
VLDLR-201ENST00000382096 UBR1Q8IWV7 1749 aa35.88■■■■□ 3.33
VLDLR-201ENST00000382096 HSPA1LP34931 641 aa35.87■■■■□ 3.33
VLDLR-201ENST00000382096 MED1Q15648 1581 aaPredicted RBP35.87■■■■□ 3.33
VLDLR-201ENST00000382096 SCAF1Q9H7N4 1312 aaKnown RBP35.86■■■■□ 3.33
VLDLR-201ENST00000382096 PIP4K2BP78356 416 aa35.86■■■■□ 3.33
VLDLR-201ENST00000382096 DUOX2Q9NRD8 1548 aa35.85■■■■□ 3.33
VLDLR-201ENST00000382096 SYNMO15061 1565 aa35.84■■■■□ 3.33
VLDLR-201ENST00000382096 CROCC2H7BZ55 1655 aa35.84■■■■□ 3.33
VLDLR-201ENST00000382096 KANK4Q5T7N3 995 aaPredicted RBP35.82■■■■□ 3.32
VLDLR-201ENST00000382096 PRDM15P57071 1507 aaPredicted RBP35.79■■■■□ 3.32
VLDLR-201ENST00000382096 LRRC7Q96NW7 1537 aa35.76■■■■□ 3.31
VLDLR-201ENST00000382096 ARHGAP31Q2M1Z3 1444 aa35.72■■■■□ 3.31
VLDLR-201ENST00000382096 ERBINQ96RT1 1412 aa35.71■■■■□ 3.31
VLDLR-201ENST00000382096 SCAF11Q99590 1463 aaKnown RBP35.71■■■■□ 3.31
VLDLR-201ENST00000382096 SLIT1O75093 1534 aa35.71■■■■□ 3.31
VLDLR-201ENST00000382096 ARHGAP23Q9P227 1491 aa35.7■■■■□ 3.31
VLDLR-201ENST00000382096 PTPN23Q9H3S7 1636 aa35.69■■■■□ 3.3
VLDLR-201ENST00000382096 KIF15Q9NS87 1388 aa35.69■■■■□ 3.3
VLDLR-201ENST00000382096 ABCC5O15440 1437 aa35.66■■■■□ 3.3
VLDLR-201ENST00000382096 PIK3C2BO00750 1634 aa35.64■■■■□ 3.3
VLDLR-201ENST00000382096 XIRP1Q702N8 1843 aaKnown RBP35.64■■■■□ 3.3
VLDLR-201ENST00000382096 KDM5AP29375 1690 aaKnown RBP35.62■■■■□ 3.29
VLDLR-201ENST00000382096 DAPK1P53355 1430 aa35.58■■■■□ 3.29
VLDLR-201ENST00000382096 LTKP29376 864 aa35.58■■■■□ 3.29
VLDLR-201ENST00000382096 RRP7BPQ9NSQ0 103 aa35.56■■■■□ 3.28
VLDLR-201ENST00000382096 TXNDC2Q86VQ3 553 aa35.54■■■■□ 3.28
VLDLR-201ENST00000382096 LMTK2Q8IWU2 1503 aa35.53■■■■□ 3.28
VLDLR-201ENST00000382096 FGD6Q6ZV73 1430 aa35.52■■■■□ 3.28
VLDLR-201ENST00000382096 KANK1Q14678 1352 aa35.51■■■■□ 3.27
VLDLR-201ENST00000382096 TMEM2Q9UHN6 1383 aa35.5■■■■□ 3.27
VLDLR-201ENST00000382096 APLP2Q06481 763 aa35.49■■■■□ 3.27
VLDLR-201ENST00000382096 EID1Q9Y6B2 187 aa35.49■■■■□ 3.27
VLDLR-201ENST00000382096 EFCAB6Q5THR3 1501 aa35.48■■■■□ 3.27
VLDLR-201ENST00000382096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.47■■■■□ 3.27
VLDLR-201ENST00000382096 PHF23Q9BUL5 403 aaPredicted RBP35.46■■■■□ 3.27
VLDLR-201ENST00000382096 ANKRD30AQ9BXX3 1397 aa35.44■■■■□ 3.26
VLDLR-201ENST00000382096 SENP3Q9H4L4 574 aaPredicted RBP35.4■■■■□ 3.26
VLDLR-201ENST00000382096 TET3O43151 1660 aa35.4■■■■□ 3.26
VLDLR-201ENST00000382096 STAG3Q9UJ98 1225 aa35.38■■■■□ 3.25
VLDLR-201ENST00000382096 ADGRB3O60242 1522 aa35.37■■■■□ 3.25
VLDLR-201ENST00000382096 NOS1P29475 1434 aa35.37■■■■□ 3.25
VLDLR-201ENST00000382096 IDI1Q13907 227 aa35.36■■■■□ 3.25
VLDLR-201ENST00000382096 ADGRL2O95490 1459 aa35.35■■■■□ 3.25
VLDLR-201ENST00000382096 CHIC2Q9UKJ5 165 aa35.34■■■■□ 3.25
VLDLR-201ENST00000382096 FAM135BQ49AJ0 1406 aa35.32■■■■□ 3.24
VLDLR-201ENST00000382096 NWD1Q149M9 1564 aa35.31■■■■□ 3.24
VLDLR-201ENST00000382096 TMEM94Q12767 1356 aa35.29■■■■□ 3.24
VLDLR-201ENST00000382096 MYO5BQ9ULV0 1848 aa35.28■■■■□ 3.24
VLDLR-201ENST00000382096 KCNA6P17658 529 aa35.28■■■■□ 3.24
VLDLR-201ENST00000382096 ROBO1Q9Y6N7 1651 aa35.27■■■■□ 3.24
VLDLR-201ENST00000382096 NKTRP30414 1462 aaKnown RBP35.27■■■■□ 3.24
VLDLR-201ENST00000382096 RPRD2Q5VT52 1461 aaKnown RBP35.27■■■■□ 3.24
VLDLR-201ENST00000382096 SLC52A1Q9NWF4 448 aa35.23■■■■□ 3.23
VLDLR-201ENST00000382096 GCC2Q8IWJ2 1684 aa35.22■■■■□ 3.23
VLDLR-201ENST00000382096 SLC26A8Q96RN1 970 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms