RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 PKD2Q13563 968 aa29.46■■■□□ 2.31
NDUFA1-201ENST00000371437 KDM5DQ9BY66 1539 aa29.45■■■□□ 2.31
NDUFA1-201ENST00000371437 ARHGEF5Q12774 1597 aa29.45■■■□□ 2.31
NDUFA1-201ENST00000371437 ILDR2Q71H61 639 aa29.45■■■□□ 2.31
NDUFA1-201ENST00000371437 NEURL4Q96JN8 1562 aa29.44■■■□□ 2.3
NDUFA1-201ENST00000371437 PZPP20742 1482 aa29.42■■■□□ 2.3
NDUFA1-201ENST00000371437 KIF3BO15066 747 aa29.36■■■□□ 2.29
NDUFA1-201ENST00000371437 RNF17Q9BXT8 1623 aaKnown RBP29.35■■■□□ 2.29
NDUFA1-201ENST00000371437 FBXO31Q5XUX0 539 aaPredicted RBP29.35■■■□□ 2.29
NDUFA1-201ENST00000371437 TNRQ92752 1358 aa29.35■■■□□ 2.29
NDUFA1-201ENST00000371437 MAST1Q9Y2H9 1570 aa29.35■■■□□ 2.29
NDUFA1-201ENST00000371437 LRRC9Q6ZRR7 1453 aa29.31■■■□□ 2.28
NDUFA1-201ENST00000371437 RSPH4AQ5TD94 716 aa29.31■■■□□ 2.28
NDUFA1-201ENST00000371437 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
NDUFA1-201ENST00000371437 VPS8Q8N3P4 1428 aa29.28■■■□□ 2.28
NDUFA1-201ENST00000371437 MROH1Q8NDA8 1641 aa29.28■■■□□ 2.28
NDUFA1-201ENST00000371437 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
NDUFA1-201ENST00000371437 UBAP1LF5GYI3 381 aa29.27■■■□□ 2.28
NDUFA1-201ENST00000371437 DEPDC5O75140 1603 aa29.27■■■□□ 2.28
NDUFA1-201ENST00000371437 VWDEQ8N2E2 1590 aa29.26■■■□□ 2.27
NDUFA1-201ENST00000371437 CEP152O94986 1710 aa29.25■■■□□ 2.27
NDUFA1-201ENST00000371437 ABCC3O15438 1527 aa29.25■■■□□ 2.27
NDUFA1-201ENST00000371437 NLRP1Q9C000 1473 aa29.25■■■□□ 2.27
NDUFA1-201ENST00000371437 CPS1P31327 1500 aa29.25■■■□□ 2.27
NDUFA1-201ENST00000371437 WASHC2CQ9Y4E1 1318 aa29.24■■■□□ 2.27
NDUFA1-201ENST00000371437 SOCS7O14512 581 aa29.24■■■□□ 2.27
NDUFA1-201ENST00000371437 MIA2Q96PC5 1412 aa29.24■■■□□ 2.27
NDUFA1-201ENST00000371437 UGGT1Q9NYU2 1555 aa29.23■■■□□ 2.27
NDUFA1-201ENST00000371437 CFAP65Q6ZU64 1925 aaKnown RBP29.22■■■□□ 2.27
NDUFA1-201ENST00000371437 SHANK2Q9UPX8 1470 aa29.22■■■□□ 2.27
NDUFA1-201ENST00000371437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.21■■■□□ 2.272e-22■■□□□ 12
NDUFA1-201ENST00000371437 MAP3K1Q13233 1512 aa29.2■■■□□ 2.27
NDUFA1-201ENST00000371437 MED14O60244 1454 aa29.2■■■□□ 2.26
NDUFA1-201ENST00000371437 IQGAP1P46940 1657 aa29.2■■■□□ 2.26
NDUFA1-201ENST00000371437 STRCP1A6NGW2 1772 aa29.2■■■□□ 2.26
NDUFA1-201ENST00000371437 LOC105371045A0A1W2PR82 267 aa29.19■■■□□ 2.26
NDUFA1-201ENST00000371437 TSPY4P0CV99 314 aa29.18■■■□□ 2.26
NDUFA1-201ENST00000371437 TSPY10P0CW01 314 aa29.18■■■□□ 2.26
NDUFA1-201ENST00000371437 CROCC2H7BZ55 1655 aa29.17■■■□□ 2.26
NDUFA1-201ENST00000371437 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
NDUFA1-201ENST00000371437 UBR1Q8IWV7 1749 aa29.15■■■□□ 2.26
NDUFA1-201ENST00000371437 ERVK-7P63135 1459 aa29.15■■■□□ 2.26
NDUFA1-201ENST00000371437 KANK4Q5T7N3 995 aaPredicted RBP29.14■■■□□ 2.26
NDUFA1-201ENST00000371437 NPHP4O75161 1426 aaPredicted RBP29.13■■■□□ 2.25
NDUFA1-201ENST00000371437 MYOM3Q5VTT5 1437 aa29.13■■■□□ 2.25
NDUFA1-201ENST00000371437 ANKLE2Q86XL3 938 aa29.11■■■□□ 2.25
NDUFA1-201ENST00000371437 THEMISQ8N1K5 641 aaPredicted RBP29.11■■■□□ 2.25
NDUFA1-201ENST00000371437 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
NDUFA1-201ENST00000371437 PRDM15P57071 1507 aaPredicted RBP29.07■■■□□ 2.24
NDUFA1-201ENST00000371437 MED1Q15648 1581 aaPredicted RBP29.05■■■□□ 2.24
NDUFA1-201ENST00000371437 SYNMO15061 1565 aa29.05■■■□□ 2.24
NDUFA1-201ENST00000371437 PTPN23Q9H3S7 1636 aa29.03■■■□□ 2.24
NDUFA1-201ENST00000371437 HSPA1LP34931 641 aa29.03■■■□□ 2.24
NDUFA1-201ENST00000371437 XIRP1Q702N8 1843 aaKnown RBP29■■■□□ 2.23
NDUFA1-201ENST00000371437 TOM1O60784 492 aa29■■■□□ 2.23
NDUFA1-201ENST00000371437 PIP4K2BP78356 416 aa29■■■□□ 2.23
NDUFA1-201ENST00000371437 LRRC7Q96NW7 1537 aa28.99■■■□□ 2.23
NDUFA1-201ENST00000371437 ABCC5O15440 1437 aa28.99■■■□□ 2.23
NDUFA1-201ENST00000371437 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
NDUFA1-201ENST00000371437 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
NDUFA1-201ENST00000371437 ARHGAP31Q2M1Z3 1444 aa28.96■■■□□ 2.23
NDUFA1-201ENST00000371437 ERBINQ96RT1 1412 aa28.96■■■□□ 2.23
NDUFA1-201ENST00000371437 SLIT1O75093 1534 aa28.96■■■□□ 2.23
NDUFA1-201ENST00000371437 KIF15Q9NS87 1388 aa28.96■■■□□ 2.23
NDUFA1-201ENST00000371437 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
NDUFA1-201ENST00000371437 SCAF11Q99590 1463 aaKnown RBP28.94■■■□□ 2.22
NDUFA1-201ENST00000371437 DAPK1P53355 1430 aa28.91■■■□□ 2.22
NDUFA1-201ENST00000371437 KDM5AP29375 1690 aaKnown RBP28.89■■■□□ 2.21
NDUFA1-201ENST00000371437 LTKP29376 864 aa28.86■■■□□ 2.21
NDUFA1-201ENST00000371437 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
NDUFA1-201ENST00000371437 LMTK2Q8IWU2 1503 aa28.85■■■□□ 2.21
NDUFA1-201ENST00000371437 RRP7BPQ9NSQ0 103 aa28.84■■■□□ 2.21
NDUFA1-201ENST00000371437 TXNDC2Q86VQ3 553 aa28.78■■■□□ 2.2
NDUFA1-201ENST00000371437 EFCAB6Q5THR3 1501 aa28.77■■■□□ 2.2
NDUFA1-201ENST00000371437 TMEM2Q9UHN6 1383 aa28.76■■■□□ 2.2
NDUFA1-201ENST00000371437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.76■■■□□ 2.19
NDUFA1-201ENST00000371437 MYO5BQ9ULV0 1848 aa28.74■■■□□ 2.19
NDUFA1-201ENST00000371437 TET3O43151 1660 aa28.74■■■□□ 2.19
NDUFA1-201ENST00000371437 ADGRL2O95490 1459 aa28.73■■■□□ 2.19
NDUFA1-201ENST00000371437 KANK1Q14678 1352 aa28.73■■■□□ 2.19
NDUFA1-201ENST00000371437 ANKRD30AQ9BXX3 1397 aa28.73■■■□□ 2.19
NDUFA1-201ENST00000371437 NOS1P29475 1434 aa28.72■■■□□ 2.19
NDUFA1-201ENST00000371437 ADGRB3O60242 1522 aa28.72■■■□□ 2.19
NDUFA1-201ENST00000371437 CHIC2Q9UKJ5 165 aa28.69■■■□□ 2.18
NDUFA1-201ENST00000371437 APLP2Q06481 763 aa28.68■■■□□ 2.18
NDUFA1-201ENST00000371437 IDI1Q13907 227 aa28.68■■■□□ 2.18
NDUFA1-201ENST00000371437 SENP3Q9H4L4 574 aaPredicted RBP28.68■■■□□ 2.18
NDUFA1-201ENST00000371437 EID1Q9Y6B2 187 aa28.68■■■□□ 2.18
NDUFA1-201ENST00000371437 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
NDUFA1-201ENST00000371437 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
NDUFA1-201ENST00000371437 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
NDUFA1-201ENST00000371437 PHF23Q9BUL5 403 aaPredicted RBP28.61■■■□□ 2.17
NDUFA1-201ENST00000371437 STAG3Q9UJ98 1225 aa28.6■■■□□ 2.17
NDUFA1-201ENST00000371437 TMEM94Q12767 1356 aa28.6■■■□□ 2.17
NDUFA1-201ENST00000371437 CHD2O14647 1828 aaKnown RBP28.59■■■□□ 2.17
NDUFA1-201ENST00000371437 RPRD2Q5VT52 1461 aaKnown RBP28.59■■■□□ 2.17
NDUFA1-201ENST00000371437 FAM135BQ49AJ0 1406 aa28.58■■■□□ 2.17
NDUFA1-201ENST00000371437 UNC13BO14795 1591 aa28.58■■■□□ 2.17
NDUFA1-201ENST00000371437 TMEM131LA2VDJ0 1609 aa28.57■■■□□ 2.16
NDUFA1-201ENST00000371437 KCNA6P17658 529 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms