RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
NDUFA1-201ENST00000371437 ABCC9O60706 1549 aa42.03■■■■■ 4.32
NDUFA1-201ENST00000371437 CCDC180Q9P1Z9 1646 aa42■■■■■ 4.31
NDUFA1-201ENST00000371437 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
NDUFA1-201ENST00000371437 NACADO15069 1562 aa39.64■■■■□ 3.94
NDUFA1-201ENST00000371437 DNAJC5BQ9UF47 199 aa39.6■■■■□ 3.93
NDUFA1-201ENST00000371437 UNC13AQ9UPW8 1703 aa39.31■■■■□ 3.88
NDUFA1-201ENST00000371437 DCAF8L2P0C7V8 631 aa39.13■■■■□ 3.85
NDUFA1-201ENST00000371437 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
NDUFA1-201ENST00000371437 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.84
NDUFA1-201ENST00000371437 BICRAQ9NZM4 1560 aa38.92■■■■□ 3.82
NDUFA1-201ENST00000371437 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
NDUFA1-201ENST00000371437 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
NDUFA1-201ENST00000371437 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
NDUFA1-201ENST00000371437 SCRIBQ14160 1630 aa38.19■■■■□ 3.7
NDUFA1-201ENST00000371437 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
NDUFA1-201ENST00000371437 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
NDUFA1-201ENST00000371437 CECR2Q9BXF3 1484 aa37.87■■■■□ 3.65
NDUFA1-201ENST00000371437 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
NDUFA1-201ENST00000371437 SMARCA4P51532 1647 aa36.45■■■■□ 3.42
NDUFA1-201ENST00000371437 ATAD2BQ9ULI0 1458 aa36.44■■■■□ 3.42
NDUFA1-201ENST00000371437 DNAJC5Q9H3Z4 198 aa36.43■■■■□ 3.42
NDUFA1-201ENST00000371437 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
NDUFA1-201ENST00000371437 SMARCA2P51531 1590 aa36.33■■■■□ 3.41
NDUFA1-201ENST00000371437 CUX2O14529 1486 aa36.31■■■■□ 3.4
NDUFA1-201ENST00000371437 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
NDUFA1-201ENST00000371437 BAZ1AQ9NRL2 1556 aaPredicted RBP36.16■■■■□ 3.38
NDUFA1-201ENST00000371437 NESP48681 1621 aa36.11■■■■□ 3.37
NDUFA1-201ENST00000371437 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
NDUFA1-201ENST00000371437 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
NDUFA1-201ENST00000371437 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
NDUFA1-201ENST00000371437 THOC2Q8NI27 1593 aaKnown RBP35.88■■■■□ 3.33
NDUFA1-201ENST00000371437 LAMC3Q9Y6N6 1575 aa35.82■■■■□ 3.32
NDUFA1-201ENST00000371437 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
NDUFA1-201ENST00000371437 WIZO95785 1651 aa35.53■■■■□ 3.28
NDUFA1-201ENST00000371437 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
NDUFA1-201ENST00000371437 CADPSQ9ULU8 1353 aa35.39■■■■□ 3.26
NDUFA1-201ENST00000371437 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
NDUFA1-201ENST00000371437 WDR62O43379 1518 aa35.27■■■■□ 3.24
NDUFA1-201ENST00000371437 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
NDUFA1-201ENST00000371437 RSF1Q96T23 1441 aaPredicted RBP35.04■■■■□ 3.2
NDUFA1-201ENST00000371437 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
NDUFA1-201ENST00000371437 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
NDUFA1-201ENST00000371437 CFTRP13569 1480 aa35.01■■■■□ 3.19
NDUFA1-201ENST00000371437 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
NDUFA1-201ENST00000371437 URB2Q14146 1524 aaKnown RBP34.82■■■■□ 3.16
NDUFA1-201ENST00000371437 TRIM41Q8WV44 630 aa34.68■■■■□ 3.14
NDUFA1-201ENST00000371437 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
NDUFA1-201ENST00000371437 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
NDUFA1-201ENST00000371437 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
NDUFA1-201ENST00000371437 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
NDUFA1-201ENST00000371437 IFT140Q96RY7 1462 aa34.39■■■■□ 3.1
NDUFA1-201ENST00000371437 RIMBP3CA6NJZ7 1639 aa34.29■■■■□ 3.08
NDUFA1-201ENST00000371437 RIMBP3BA6NNM3 1639 aa34.29■■■■□ 3.08
NDUFA1-201ENST00000371437 RIMBP3Q9UFD9 1639 aa34.29■■■■□ 3.08
NDUFA1-201ENST00000371437 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
NDUFA1-201ENST00000371437 DNMBPQ6XZF7 1577 aa34.28■■■■□ 3.08
NDUFA1-201ENST00000371437 ABCC8Q09428 1581 aa34.22■■■■□ 3.07
NDUFA1-201ENST00000371437 TARBP1Q13395 1621 aaKnown RBP34.18■■■■□ 3.06
NDUFA1-201ENST00000371437 CHD1O14646 1710 aa34.13■■■■□ 3.05
NDUFA1-201ENST00000371437 ARHGEF11O15085 1522 aa34.09■■■■□ 3.05
NDUFA1-201ENST00000371437 POLA1P09884 1462 aaPredicted RBP34.02■■■■□ 3.04
NDUFA1-201ENST00000371437 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.041e-7■■□□□ 13.1
NDUFA1-201ENST00000371437 RAD54L2Q9Y4B4 1467 aa33.89■■■■□ 3.02
NDUFA1-201ENST00000371437 WDR97A6NE52 1622 aa33.79■■■■□ 3
NDUFA1-201ENST00000371437 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
NDUFA1-201ENST00000371437 SOGA1O94964 1423 aa33.78■■■■□ 3
NDUFA1-201ENST00000371437 ARAP1Q96P48 1450 aa33.76■■■■□ 3
NDUFA1-201ENST00000371437 CUX1P39880 1505 aa33.76■■■■□ 3
NDUFA1-201ENST00000371437 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
NDUFA1-201ENST00000371437 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
NDUFA1-201ENST00000371437 CYB5RLQ6IPT4 315 aa33.69■■■□□ 2.98
NDUFA1-201ENST00000371437 FBLN2P98095 1184 aa33.67■■■□□ 2.98
NDUFA1-201ENST00000371437 CLASP1Q7Z460 1538 aa33.66■■■□□ 2.98
NDUFA1-201ENST00000371437 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
NDUFA1-201ENST00000371437 MAGI1Q96QZ7 1491 aaPredicted RBP33.58■■■□□ 2.97
NDUFA1-201ENST00000371437 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
NDUFA1-201ENST00000371437 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
NDUFA1-201ENST00000371437 SYNJ2O15056 1496 aa33.47■■■□□ 2.95
NDUFA1-201ENST00000371437 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
NDUFA1-201ENST00000371437 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
NDUFA1-201ENST00000371437 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
NDUFA1-201ENST00000371437 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
NDUFA1-201ENST00000371437 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
NDUFA1-201ENST00000371437 BIVM-ERCC5R4GMW8 1640 aa33.24■■■□□ 2.91
NDUFA1-201ENST00000371437 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
NDUFA1-201ENST00000371437 SUPT5HO00267 1087 aaKnown RBP33.18■■■□□ 2.9
NDUFA1-201ENST00000371437 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
NDUFA1-201ENST00000371437 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
NDUFA1-201ENST00000371437 ERCC6L2Q5T890 1561 aa33.13■■■□□ 2.89
NDUFA1-201ENST00000371437 CEP170Q5SW79 1584 aa33.12■■■□□ 2.89
NDUFA1-201ENST00000371437 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
NDUFA1-201ENST00000371437 NUP160Q12769 1436 aa33.06■■■□□ 2.88
NDUFA1-201ENST00000371437 SHROOM2Q13796 1616 aa33.04■■■□□ 2.88
NDUFA1-201ENST00000371437 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
NDUFA1-201ENST00000371437 FHAD1B1AJZ9 1412 aa32.95■■■□□ 2.87
NDUFA1-201ENST00000371437 KIF13AQ9H1H9 1805 aa32.76■■■□□ 2.83
NDUFA1-201ENST00000371437 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
NDUFA1-201ENST00000371437 PRG4Q92954 1404 aaPredicted RBP32.68■■■□□ 2.82
NDUFA1-201ENST00000371437 JPH4Q96JJ6 628 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms