RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 KIF3BO15066 747 aa16.42■□□□□ 0.22
UBE2D3-206ENST00000357194 FBXO31Q5XUX0 539 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-206ENST00000357194 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
UBE2D3-206ENST00000357194 NCOA2Q15596 1464 aa16.38■□□□□ 0.21
UBE2D3-206ENST00000357194 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
UBE2D3-206ENST00000357194 TNRQ92752 1358 aa16.38■□□□□ 0.21
UBE2D3-206ENST00000357194 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
UBE2D3-206ENST00000357194 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
UBE2D3-206ENST00000357194 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
UBE2D3-206ENST00000357194 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-206ENST00000357194 PZPP20742 1482 aa16.35■□□□□ 0.21
UBE2D3-206ENST00000357194 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
UBE2D3-206ENST00000357194 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
UBE2D3-206ENST00000357194 TSPY4P0CV99 314 aa16.33■□□□□ 0.2
UBE2D3-206ENST00000357194 TSPY10P0CW01 314 aa16.33■□□□□ 0.2
UBE2D3-206ENST00000357194 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
UBE2D3-206ENST00000357194 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-206ENST00000357194 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
UBE2D3-206ENST00000357194 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.21e-10■■■□□ 14.9
UBE2D3-206ENST00000357194 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
UBE2D3-206ENST00000357194 CPS1P31327 1500 aa16.31■□□□□ 0.2
UBE2D3-206ENST00000357194 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
UBE2D3-206ENST00000357194 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-206ENST00000357194 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
UBE2D3-206ENST00000357194 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
UBE2D3-206ENST00000357194 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
UBE2D3-206ENST00000357194 TOM1O60784 492 aa16.29■□□□□ 0.2
UBE2D3-206ENST00000357194 HSPA1LP34931 641 aa16.28■□□□□ 0.2
UBE2D3-206ENST00000357194 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-206ENST00000357194 MED14O60244 1454 aa16.26■□□□□ 0.19
UBE2D3-206ENST00000357194 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-206ENST00000357194 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
UBE2D3-206ENST00000357194 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
UBE2D3-206ENST00000357194 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
UBE2D3-206ENST00000357194 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
UBE2D3-206ENST00000357194 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
UBE2D3-206ENST00000357194 ZC3H13Q5T200 1668 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-206ENST00000357194 ABCC3O15438 1527 aa16.23■□□□□ 0.19
UBE2D3-206ENST00000357194 IQGAP1P46940 1657 aa16.22■□□□□ 0.19
UBE2D3-206ENST00000357194 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
UBE2D3-206ENST00000357194 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
UBE2D3-206ENST00000357194 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
UBE2D3-206ENST00000357194 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-206ENST00000357194 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-206ENST00000357194 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
UBE2D3-206ENST00000357194 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
UBE2D3-206ENST00000357194 CEP152O94986 1710 aa16.19■□□□□ 0.18
UBE2D3-206ENST00000357194 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
UBE2D3-206ENST00000357194 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
UBE2D3-206ENST00000357194 ALKQ9UM73 1620 aa16.18■□□□□ 0.18
UBE2D3-206ENST00000357194 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
UBE2D3-206ENST00000357194 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
UBE2D3-206ENST00000357194 LRRC7Q96NW7 1537 aa16.16■□□□□ 0.18
UBE2D3-206ENST00000357194 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
UBE2D3-206ENST00000357194 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
UBE2D3-206ENST00000357194 LTKP29376 864 aa16.13■□□□□ 0.17
UBE2D3-206ENST00000357194 SCAF11Q99590 1463 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-206ENST00000357194 TXNDC2Q86VQ3 553 aa16.12■□□□□ 0.17
UBE2D3-206ENST00000357194 SYNMO15061 1565 aa16.12■□□□□ 0.17
UBE2D3-206ENST00000357194 RRP7BPQ9NSQ0 103 aa16.11■□□□□ 0.17
UBE2D3-206ENST00000357194 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
UBE2D3-206ENST00000357194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBE2D3-206ENST00000357194 ABCC5O15440 1437 aa16.1■□□□□ 0.17
UBE2D3-206ENST00000357194 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
UBE2D3-206ENST00000357194 ARHGAP23Q9P227 1491 aa16.1■□□□□ 0.17
UBE2D3-206ENST00000357194 SLIT1O75093 1534 aa16.09■□□□□ 0.17
UBE2D3-206ENST00000357194 PRDM15P57071 1507 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-206ENST00000357194 ERBINQ96RT1 1412 aa16.09■□□□□ 0.17
UBE2D3-206ENST00000357194 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.17
UBE2D3-206ENST00000357194 EID1Q9Y6B2 187 aa16.08■□□□□ 0.16
UBE2D3-206ENST00000357194 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
UBE2D3-206ENST00000357194 PIK3C2BO00750 1634 aa16.06■□□□□ 0.16
UBE2D3-206ENST00000357194 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
UBE2D3-206ENST00000357194 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-206ENST00000357194 KANK1Q14678 1352 aa16.05■□□□□ 0.16
UBE2D3-206ENST00000357194 APLP2Q06481 763 aa16.05■□□□□ 0.16
UBE2D3-206ENST00000357194 DAPK1P53355 1430 aa16.04■□□□□ 0.16
UBE2D3-206ENST00000357194 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
UBE2D3-206ENST00000357194 IDI1Q13907 227 aa16.02■□□□□ 0.16
UBE2D3-206ENST00000357194 CHIC2Q9UKJ5 165 aa16.02■□□□□ 0.16
UBE2D3-206ENST00000357194 EFCAB6Q5THR3 1501 aa16■□□□□ 0.15
UBE2D3-206ENST00000357194 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
UBE2D3-206ENST00000357194 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
UBE2D3-206ENST00000357194 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
UBE2D3-206ENST00000357194 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
UBE2D3-206ENST00000357194 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
UBE2D3-206ENST00000357194 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
UBE2D3-206ENST00000357194 FAM135BQ49AJ0 1406 aa15.97■□□□□ 0.15
UBE2D3-206ENST00000357194 KCNA6P17658 529 aa15.97■□□□□ 0.15
UBE2D3-206ENST00000357194 RGS17Q9UGC6 210 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-206ENST00000357194 TET3O43151 1660 aa15.96■□□□□ 0.15
UBE2D3-206ENST00000357194 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
UBE2D3-206ENST00000357194 NOS1P29475 1434 aa15.95■□□□□ 0.14
UBE2D3-206ENST00000357194 RBM33Q96EV2 1170 aaKnown RBP15.95■□□□□ 0.14
UBE2D3-206ENST00000357194 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
UBE2D3-206ENST00000357194 BCANQ96GW7 911 aa15.93■□□□□ 0.14
UBE2D3-206ENST00000357194 ADGRB3O60242 1522 aa15.93■□□□□ 0.14
UBE2D3-206ENST00000357194 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
UBE2D3-206ENST00000357194 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
UBE2D3-206ENST00000357194 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms