RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
UBE2D3-206ENST00000357194 ABCC9O60706 1549 aa23.44■■□□□ 1.34
UBE2D3-206ENST00000357194 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
UBE2D3-206ENST00000357194 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
UBE2D3-206ENST00000357194 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
UBE2D3-206ENST00000357194 NACADO15069 1562 aa22.03■■□□□ 1.12
UBE2D3-206ENST00000357194 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
UBE2D3-206ENST00000357194 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
UBE2D3-206ENST00000357194 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
UBE2D3-206ENST00000357194 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
UBE2D3-206ENST00000357194 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
UBE2D3-206ENST00000357194 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-206ENST00000357194 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
UBE2D3-206ENST00000357194 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
UBE2D3-206ENST00000357194 SCRIBQ14160 1630 aa21.19■□□□□ 0.98
UBE2D3-206ENST00000357194 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
UBE2D3-206ENST00000357194 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
UBE2D3-206ENST00000357194 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-206ENST00000357194 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
UBE2D3-206ENST00000357194 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
UBE2D3-206ENST00000357194 ATAD2BQ9ULI0 1458 aa20.26■□□□□ 0.83
UBE2D3-206ENST00000357194 CUX2O14529 1486 aa20.25■□□□□ 0.83
UBE2D3-206ENST00000357194 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
UBE2D3-206ENST00000357194 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
UBE2D3-206ENST00000357194 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
UBE2D3-206ENST00000357194 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
UBE2D3-206ENST00000357194 NESP48681 1621 aa20.09■□□□□ 0.81
UBE2D3-206ENST00000357194 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-206ENST00000357194 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-206ENST00000357194 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
UBE2D3-206ENST00000357194 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
UBE2D3-206ENST00000357194 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
UBE2D3-206ENST00000357194 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
UBE2D3-206ENST00000357194 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.76
UBE2D3-206ENST00000357194 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
UBE2D3-206ENST00000357194 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
UBE2D3-206ENST00000357194 WIZO95785 1651 aa19.68■□□□□ 0.74
UBE2D3-206ENST00000357194 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
UBE2D3-206ENST00000357194 WDR62O43379 1518 aa19.6■□□□□ 0.73
UBE2D3-206ENST00000357194 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
UBE2D3-206ENST00000357194 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
UBE2D3-206ENST00000357194 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
UBE2D3-206ENST00000357194 CFTRP13569 1480 aa19.46■□□□□ 0.71
UBE2D3-206ENST00000357194 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-206ENST00000357194 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
UBE2D3-206ENST00000357194 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
UBE2D3-206ENST00000357194 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
UBE2D3-206ENST00000357194 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
UBE2D3-206ENST00000357194 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
UBE2D3-206ENST00000357194 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
UBE2D3-206ENST00000357194 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
UBE2D3-206ENST00000357194 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
UBE2D3-206ENST00000357194 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
UBE2D3-206ENST00000357194 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.65
UBE2D3-206ENST00000357194 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.65
UBE2D3-206ENST00000357194 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.65
UBE2D3-206ENST00000357194 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
UBE2D3-206ENST00000357194 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.63
UBE2D3-206ENST00000357194 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
UBE2D3-206ENST00000357194 ARHGEF11O15085 1522 aa19■□□□□ 0.63
UBE2D3-206ENST00000357194 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.632e-7■■■■□ 25.1
UBE2D3-206ENST00000357194 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
UBE2D3-206ENST00000357194 CHD1O14646 1710 aa18.92■□□□□ 0.62
UBE2D3-206ENST00000357194 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
UBE2D3-206ENST00000357194 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
UBE2D3-206ENST00000357194 FBLN2P98095 1184 aa18.89■□□□□ 0.61
UBE2D3-206ENST00000357194 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
UBE2D3-206ENST00000357194 SOGA1O94964 1423 aa18.83■□□□□ 0.61
UBE2D3-206ENST00000357194 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
UBE2D3-206ENST00000357194 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
UBE2D3-206ENST00000357194 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.59
UBE2D3-206ENST00000357194 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-206ENST00000357194 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
UBE2D3-206ENST00000357194 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
UBE2D3-206ENST00000357194 CUX1P39880 1505 aa18.72■□□□□ 0.59
UBE2D3-206ENST00000357194 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
UBE2D3-206ENST00000357194 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
UBE2D3-206ENST00000357194 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
UBE2D3-206ENST00000357194 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
UBE2D3-206ENST00000357194 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
UBE2D3-206ENST00000357194 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
UBE2D3-206ENST00000357194 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
UBE2D3-206ENST00000357194 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
UBE2D3-206ENST00000357194 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
UBE2D3-206ENST00000357194 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.55
UBE2D3-206ENST00000357194 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
UBE2D3-206ENST00000357194 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.545e-6■■■■■ 29.2
UBE2D3-206ENST00000357194 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
UBE2D3-206ENST00000357194 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
UBE2D3-206ENST00000357194 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
UBE2D3-206ENST00000357194 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
UBE2D3-206ENST00000357194 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
UBE2D3-206ENST00000357194 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
UBE2D3-206ENST00000357194 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
UBE2D3-206ENST00000357194 NUP160Q12769 1436 aa18.36■□□□□ 0.53
UBE2D3-206ENST00000357194 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
UBE2D3-206ENST00000357194 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
UBE2D3-206ENST00000357194 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
UBE2D3-206ENST00000357194 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
UBE2D3-206ENST00000357194 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms