RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 NUDCQ9Y266 331 aa10.55□□□□□ -0.72
PDE1A-201ENST00000351439 ANKRD30AQ9BXX3 1397 aa10.55□□□□□ -0.72
PDE1A-201ENST00000351439 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
PDE1A-201ENST00000351439 ANKRD50Q9ULJ7 1429 aa10.54□□□□□ -0.72
PDE1A-201ENST00000351439 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
PDE1A-201ENST00000351439 CDC42BPAQ5VT25 1732 aa10.54□□□□□ -0.72
PDE1A-201ENST00000351439 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
PDE1A-201ENST00000351439 CARD11Q9BXL7 1154 aa10.53□□□□□ -0.72
PDE1A-201ENST00000351439 FBLN2P98095 1184 aa10.53□□□□□ -0.72
PDE1A-201ENST00000351439 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
PDE1A-201ENST00000351439 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
PDE1A-201ENST00000351439 NUP155O75694 1391 aa10.53□□□□□ -0.72
PDE1A-201ENST00000351439 TMC1Q8TDI8 760 aa10.52□□□□□ -0.72
PDE1A-201ENST00000351439 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.73
PDE1A-201ENST00000351439 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.73
PDE1A-201ENST00000351439 RNF123Q5XPI4 1314 aa10.52□□□□□ -0.73
PDE1A-201ENST00000351439 RALGAPBQ86X10 1494 aa10.51□□□□□ -0.73
PDE1A-201ENST00000351439 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
PDE1A-201ENST00000351439 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
PDE1A-201ENST00000351439 DCAF11Q8TEB1 546 aa10.5□□□□□ -0.73
PDE1A-201ENST00000351439 C9orf84Q5VXU9 1444 aa10.5□□□□□ -0.73
PDE1A-201ENST00000351439 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
PDE1A-201ENST00000351439 PLEKHD1A6NEE1 506 aa10.49□□□□□ -0.73
PDE1A-201ENST00000351439 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
PDE1A-201ENST00000351439 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 KIF15Q9NS87 1388 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 SYNJ2O15056 1496 aa10.48□□□□□ -0.73
PDE1A-201ENST00000351439 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
PDE1A-201ENST00000351439 RRP9O43818 475 aaKnown RBP10.47□□□□□ -0.73
PDE1A-201ENST00000351439 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDE1A-201ENST00000351439 E9PCH4 1651 aa10.47□□□□□ -0.73
PDE1A-201ENST00000351439 ABCC10Q5T3U5 1492 aa10.47□□□□□ -0.73
PDE1A-201ENST00000351439 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
PDE1A-201ENST00000351439 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
PDE1A-201ENST00000351439 TSPY4P0CV99 314 aa10.46□□□□□ -0.73
PDE1A-201ENST00000351439 TSPY10P0CW01 314 aa10.46□□□□□ -0.73
PDE1A-201ENST00000351439 SHANK2Q9UPX8 1470 aa10.46□□□□□ -0.73
PDE1A-201ENST00000351439 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.74
PDE1A-201ENST00000351439 ATP10BO94823 1461 aa10.46□□□□□ -0.74
PDE1A-201ENST00000351439 ABCA8O94911 1581 aa10.45□□□□□ -0.74
PDE1A-201ENST00000351439 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
PDE1A-201ENST00000351439 BRD4O60885 1362 aaPredicted RBP10.44□□□□□ -0.74
PDE1A-201ENST00000351439 RALBP1Q15311 655 aa10.44□□□□□ -0.74
PDE1A-201ENST00000351439 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
PDE1A-201ENST00000351439 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
PDE1A-201ENST00000351439 PTPRGP23470 1445 aa10.43□□□□□ -0.74
PDE1A-201ENST00000351439 NUP160Q12769 1436 aa10.43□□□□□ -0.74
PDE1A-201ENST00000351439 TRPM1Q7Z4N2 1603 aa10.43□□□□□ -0.74
PDE1A-201ENST00000351439 CDC42BPBQ9Y5S2 1711 aa10.42□□□□□ -0.74
PDE1A-201ENST00000351439 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
PDE1A-201ENST00000351439 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
PDE1A-201ENST00000351439 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
PDE1A-201ENST00000351439 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
PDE1A-201ENST00000351439 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
PDE1A-201ENST00000351439 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
PDE1A-201ENST00000351439 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
PDE1A-201ENST00000351439 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
PDE1A-201ENST00000351439 ARHGEF5Q12774 1597 aa10.41□□□□□ -0.74
PDE1A-201ENST00000351439 SAMD9LQ8IVG5 1584 aa10.41□□□□□ -0.74
PDE1A-201ENST00000351439 TCERG1O14776 1098 aaKnown RBP10.4□□□□□ -0.74
PDE1A-201ENST00000351439 RCAN3Q9UKA8 241 aa10.4□□□□□ -0.74
PDE1A-201ENST00000351439 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
PDE1A-201ENST00000351439 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
PDE1A-201ENST00000351439 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 NLRP13Q86W25 1043 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
PDE1A-201ENST00000351439 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
PDE1A-201ENST00000351439 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
PDE1A-201ENST00000351439 MS4A1P11836 297 aa10.38□□□□□ -0.75
PDE1A-201ENST00000351439 CC2D1BQ5T0F9 858 aaKnown RBP10.38□□□□□ -0.75
PDE1A-201ENST00000351439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
PDE1A-201ENST00000351439 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
PDE1A-201ENST00000351439 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
PDE1A-201ENST00000351439 DISP3Q9P2K9 1392 aa10.36□□□□□ -0.75
PDE1A-201ENST00000351439 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
PDE1A-201ENST00000351439 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
PDE1A-201ENST00000351439 A2MP01023 1474 aa10.36□□□□□ -0.75
PDE1A-201ENST00000351439 PLIN1O60240 522 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 BACH2Q9BYV9 841 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 SYCP2Q9BX26 1530 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 CHD1O14646 1710 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 PDE4AP27815 886 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 TESK2Q96S53 571 aa10.35□□□□□ -0.75
PDE1A-201ENST00000351439 COL17A1Q9UMD9 1497 aaPredicted RBP10.34□□□□□ -0.75
PDE1A-201ENST00000351439 FGD1P98174 961 aa10.34□□□□□ -0.75
PDE1A-201ENST00000351439 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
PDE1A-201ENST00000351439 PANK3Q9H999 370 aa10.34□□□□□ -0.75
PDE1A-201ENST00000351439 UNC13BO14795 1591 aa10.34□□□□□ -0.75
PDE1A-201ENST00000351439 PRDM15P57071 1507 aaPredicted RBP10.34□□□□□ -0.75
PDE1A-201ENST00000351439 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
PDE1A-201ENST00000351439 AAMPQ13685 434 aa10.34□□□□□ -0.75
PDE1A-201ENST00000351439 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
PDE1A-201ENST00000351439 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
PDE1A-201ENST00000351439 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms