RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 NISCHQ9Y2I1 1504 aa15.79■□□□□ 0.12
PDE1A-201ENST00000351439 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
PDE1A-201ENST00000351439 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
PDE1A-201ENST00000351439 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
PDE1A-201ENST00000351439 ZCCHC6Q5VYS8 1495 aaKnown RBP13.37□□□□□ -0.27
PDE1A-201ENST00000351439 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
PDE1A-201ENST00000351439 MYT1Q01538 1121 aa13.31□□□□□ -0.28
PDE1A-201ENST00000351439 HRCP23327 699 aa13.26□□□□□ -0.29
PDE1A-201ENST00000351439 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
PDE1A-201ENST00000351439 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
PDE1A-201ENST00000351439 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.31
PDE1A-201ENST00000351439 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
PDE1A-201ENST00000351439 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
PDE1A-201ENST00000351439 ABCC9O60706 1549 aa12.86□□□□□ -0.35
PDE1A-201ENST00000351439 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
PDE1A-201ENST00000351439 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
PDE1A-201ENST00000351439 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
PDE1A-201ENST00000351439 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
PDE1A-201ENST00000351439 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
PDE1A-201ENST00000351439 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
PDE1A-201ENST00000351439 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
PDE1A-201ENST00000351439 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
PDE1A-201ENST00000351439 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
PDE1A-201ENST00000351439 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
PDE1A-201ENST00000351439 FAM9AQ8IZU1 332 aaPredicted RBP12.43□□□□□ -0.42
PDE1A-201ENST00000351439 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
PDE1A-201ENST00000351439 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
PDE1A-201ENST00000351439 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
PDE1A-201ENST00000351439 ACIN1Q9UKV3 1341 aaKnown RBP12.33□□□□□ -0.44
PDE1A-201ENST00000351439 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
PDE1A-201ENST00000351439 NACADO15069 1562 aa12.29□□□□□ -0.44
PDE1A-201ENST00000351439 WIZO95785 1651 aa12.28□□□□□ -0.44
PDE1A-201ENST00000351439 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
PDE1A-201ENST00000351439 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
PDE1A-201ENST00000351439 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
PDE1A-201ENST00000351439 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
PDE1A-201ENST00000351439 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
PDE1A-201ENST00000351439 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
PDE1A-201ENST00000351439 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
PDE1A-201ENST00000351439 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
PDE1A-201ENST00000351439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
PDE1A-201ENST00000351439 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
PDE1A-201ENST00000351439 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
PDE1A-201ENST00000351439 UNC13AQ9UPW8 1703 aa12.01□□□□□ -0.49
PDE1A-201ENST00000351439 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
PDE1A-201ENST00000351439 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
PDE1A-201ENST00000351439 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
PDE1A-201ENST00000351439 SOGA1O94964 1423 aa11.96□□□□□ -0.5
PDE1A-201ENST00000351439 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDE1A-201ENST00000351439 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
PDE1A-201ENST00000351439 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
PDE1A-201ENST00000351439 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
PDE1A-201ENST00000351439 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
PDE1A-201ENST00000351439 ERICH6Q7L0X2 663 aa11.89□□□□□ -0.51
PDE1A-201ENST00000351439 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
PDE1A-201ENST00000351439 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
PDE1A-201ENST00000351439 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
PDE1A-201ENST00000351439 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
PDE1A-201ENST00000351439 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
PDE1A-201ENST00000351439 EEA1Q15075 1411 aa11.83□□□□□ -0.52
PDE1A-201ENST00000351439 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
PDE1A-201ENST00000351439 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
PDE1A-201ENST00000351439 CLSPNQ9HAW4 1339 aa11.76□□□□□ -0.53
PDE1A-201ENST00000351439 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
PDE1A-201ENST00000351439 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
PDE1A-201ENST00000351439 APLP2Q06481 763 aa11.72□□□□□ -0.53
PDE1A-201ENST00000351439 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
PDE1A-201ENST00000351439 KIF21BO75037 1637 aa11.7□□□□□ -0.54
PDE1A-201ENST00000351439 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
PDE1A-201ENST00000351439 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
PDE1A-201ENST00000351439 CLIP1P30622 1438 aa11.68□□□□□ -0.54
PDE1A-201ENST00000351439 RANGAP1P46060 587 aaPredicted RBP11.66□□□□□ -0.54
PDE1A-201ENST00000351439 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
PDE1A-201ENST00000351439 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
PDE1A-201ENST00000351439 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
PDE1A-201ENST00000351439 VPS8Q8N3P4 1428 aa11.63□□□□□ -0.55
PDE1A-201ENST00000351439 YTHDC1Q96MU7 727 aaKnown RBP11.61□□□□□ -0.55
PDE1A-201ENST00000351439 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
PDE1A-201ENST00000351439 TSHZ2Q9NRE2 1034 aa11.59□□□□□ -0.55
PDE1A-201ENST00000351439 MIER1Q8N108 512 aa11.59□□□□□ -0.55
PDE1A-201ENST00000351439 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
PDE1A-201ENST00000351439 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
PDE1A-201ENST00000351439 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
PDE1A-201ENST00000351439 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
PDE1A-201ENST00000351439 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
PDE1A-201ENST00000351439 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
PDE1A-201ENST00000351439 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
PDE1A-201ENST00000351439 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.58
PDE1A-201ENST00000351439 CUX1P39880 1505 aa11.44□□□□□ -0.58
PDE1A-201ENST00000351439 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
PDE1A-201ENST00000351439 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
PDE1A-201ENST00000351439 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
PDE1A-201ENST00000351439 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
PDE1A-201ENST00000351439 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
PDE1A-201ENST00000351439 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
PDE1A-201ENST00000351439 ITGAEP38570 1179 aa11.36□□□□□ -0.59
PDE1A-201ENST00000351439 CFTRP13569 1480 aa11.34□□□□□ -0.59
PDE1A-201ENST00000351439 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.59
PDE1A-201ENST00000351439 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
PDE1A-201ENST00000351439 CUX2O14529 1486 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms