RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SPS2P08459 502 aa7□□□□□ -1.29
RUP1YOR138C CHL1P22516 861 aaPredicted RBP7□□□□□ -1.29
RUP1YOR138C RFA2P26754 273 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C ASC1P38011 319 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C SCO2P38072 301 aa7□□□□□ -1.29
RUP1YOR138C IML3P38265 245 aa7□□□□□ -1.29
RUP1YOR138C RCY1P39531 840 aa7□□□□□ -1.29
RUP1YOR138C APQ12P40532 138 aa7□□□□□ -1.29
RUP1YOR138C PAM16P42949 149 aa7□□□□□ -1.29
RUP1YOR138C CHA4P43634 648 aa7□□□□□ -1.29
RUP1YOR138C MDE1P47095 244 aa7□□□□□ -1.29
RUP1YOR138C HAM1P47119 197 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C COS12P53053 380 aa7□□□□□ -1.29
RUP1YOR138C ROG1P53118 685 aa7□□□□□ -1.29
RUP1YOR138C TDA1Q03533 586 aa7□□□□□ -1.29
RUP1YOR138C PDR8Q06149 701 aa7□□□□□ -1.29
RUP1YOR138C RRP9Q06506 573 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C YOR283WQ12040 230 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C RPS18AP0CX55 146 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C RPS18BP0CX56 146 aaPredicted RBP7□□□□□ -1.29
RUP1YOR138C CTS1P29029 562 aa7□□□□□ -1.29
RUP1YOR138C MGM101P32787 269 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C ARC19P33204 171 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C SNU114P36048 1008 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C RPS20P38701 121 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C JHD1P40034 492 aa7□□□□□ -1.29
RUP1YOR138C MMF1P40185 145 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C TIR3P40552 269 aa7□□□□□ -1.29
RUP1YOR138C PFS2P42841 465 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C ZRG17P53735 605 aa7□□□□□ -1.29
RUP1YOR138C MTQ1P53944 314 aa7□□□□□ -1.29
RUP1YOR138C NUP116Q02630 1113 aa7□□□□□ -1.29
RUP1YOR138C AIM36Q03798 255 aa7□□□□□ -1.29
RUP1YOR138C EMI2Q04409 500 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C MFB1Q04922 465 aa7□□□□□ -1.29
RUP1YOR138C TY1A-NL1Q12391 440 aaKnown RBP7□□□□□ -1.29
RUP1YOR138C URA3P03962 267 aa6.99□□□□□ -1.29
RUP1YOR138C CAR2P07991 424 aaKnown RBP6.99□□□□□ -1.29
RUP1YOR138C PET54P10834 293 aa6.99□□□□□ -1.29
RUP1YOR138C ISF1P32488 338 aa6.99□□□□□ -1.29
RUP1YOR138C NAT2P37293 288 aa6.99□□□□□ -1.29
RUP1YOR138C CCT6P39079 546 aa6.99□□□□□ -1.29
RUP1YOR138C PYK2P52489 506 aaKnown RBP6.99□□□□□ -1.29
RUP1YOR138C SKI7Q08491 747 aaPredicted RBP6.99□□□□□ -1.29
RUP1YOR138C YPR064WQ12492 139 aa6.99□□□□□ -1.29
RUP1YOR138C SKS1Q12505 502 aa6.99□□□□□ -1.29
RUP1YOR138C YLR099W-AQ3E798 87 aa6.99□□□□□ -1.29
RUP1YOR138C RPS17AP02407 136 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C RPS17BP14127 136 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C NCP1P16603 691 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C LST4P34239 828 aa6.98□□□□□ -1.29
RUP1YOR138C MNN2P38069 597 aa6.98□□□□□ -1.29
RUP1YOR138C RTC2P38279 296 aa6.98□□□□□ -1.29
RUP1YOR138C GGC1P38988 300 aa6.98□□□□□ -1.29
RUP1YOR138C RTT105P40063 208 aa6.98□□□□□ -1.29
RUP1YOR138C AAD14P42884 376 aa6.98□□□□□ -1.29
RUP1YOR138C YFR018CP43599 363 aa6.98□□□□□ -1.29
RUP1YOR138C MSS11Q03825 758 aa6.98□□□□□ -1.29
RUP1YOR138C RPC11Q04307 110 aaPredicted RBP6.98□□□□□ -1.29
RUP1YOR138C ELP6Q04868 273 aa6.98□□□□□ -1.29
RUP1YOR138C TFB4Q12004 338 aa6.98□□□□□ -1.29
RUP1YOR138C BSC1Q12140 328 aa6.98□□□□□ -1.29
RUP1YOR138C TIR4Q12218 487 aaPredicted RBP6.98□□□□□ -1.29
RUP1YOR138C SFG1Q12507 346 aa6.98□□□□□ -1.29
RUP1YOR138C YDL007C-AQ2V2Q0 85 aa6.98□□□□□ -1.29
RUP1YOR138C YCR102CP25608 368 aa6.98□□□□□ -1.29
RUP1YOR138C TAF14P35189 244 aa6.98□□□□□ -1.29
RUP1YOR138C TMA19P35691 167 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C SAF1P38352 637 aa6.98□□□□□ -1.29
RUP1YOR138C YIL165CP40446 119 aa6.98□□□□□ -1.29
RUP1YOR138C SNM1P40993 198 aa6.98□□□□□ -1.29
RUP1YOR138C YFR020WP43600 232 aa6.98□□□□□ -1.29
RUP1YOR138C YJL049WP47048 450 aa6.98□□□□□ -1.29
RUP1YOR138C SPT20P50875 604 aa6.98□□□□□ -1.29
RUP1YOR138C EXG2P52911 562 aa6.98□□□□□ -1.29
RUP1YOR138C JAC1P53193 184 aa6.98□□□□□ -1.29
RUP1YOR138C BIO5P53744 561 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C DUS1P53759 423 aaKnown RBP6.98□□□□□ -1.29
RUP1YOR138C TPO3Q06451 622 aa6.98□□□□□ -1.29
RUP1YOR138C PCL9Q12477 304 aa6.98□□□□□ -1.29
RUP1YOR138C HIS3P06633 220 aa6.97□□□□□ -1.29
RUP1YOR138C YJU3P28321 313 aa6.97□□□□□ -1.29
RUP1YOR138C SUR1P33300 382 aa6.97□□□□□ -1.29
RUP1YOR138C RRN10P38204 145 aa6.97□□□□□ -1.29
RUP1YOR138C MET30P39014 640 aa6.97□□□□□ -1.29
RUP1YOR138C ECM27P47144 725 aa6.97□□□□□ -1.29
RUP1YOR138C NUP57P48837 541 aa6.97□□□□□ -1.29
RUP1YOR138C MRPS16Q02608 121 aa6.97□□□□□ -1.29
RUP1YOR138C PLB2Q03674 706 aa6.97□□□□□ -1.29
RUP1YOR138C OST6Q03723 332 aa6.97□□□□□ -1.29
RUP1YOR138C CTK1Q03957 528 aaKnown RBP6.97□□□□□ -1.29
RUP1YOR138C ARV1Q06541 321 aa6.97□□□□□ -1.29
RUP1YOR138C REX4Q08237 289 aa6.97□□□□□ -1.29
RUP1YOR138C YOL114CQ12322 202 aa6.97□□□□□ -1.29
RUP1YOR138C HCM1P25364 564 aa6.96□□□□□ -1.29
RUP1YOR138C CDC12P32468 407 aaKnown RBP6.96□□□□□ -1.29
RUP1YOR138C SKN1P33336 771 aa6.96□□□□□ -1.29
RUP1YOR138C KKQ8P36004 724 aa6.96□□□□□ -1.29
RUP1YOR138C YKL151CP36059 337 aa6.96□□□□□ -1.29
RUP1YOR138C SHE2P36068 246 aaKnown RBP RIP-Chip data6.96□□□□□ -1.29not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms