Protein–RNA interactions for Protein: P40034

JHD1, JmjC domain-containing histone demethylation protein 1, yeastyeast

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
JHD1P40034 YML009W-BYML009W-B 477 nt22.08■■□□□ 1.13
JHD1P40034 NOP1YDL014W 984 nt21.77■■□□□ 1.08
JHD1P40034 NSR1YGR159C 1245 nt21.44■■□□□ 1.02
JHD1P40034 YKL036CYKL036C 393 nt20.64■□□□□ 0.89
JHD1P40034 YJL027CYJL027C 417 nt19.38■□□□□ 0.69
JHD1P40034 Q0297Q0297 156 nt19.23■□□□□ 0.67
JHD1P40034 SCS3YGL126W 1143 nt19.07■□□□□ 0.64
JHD1P40034 SRX1YKL086W 384 nt19■□□□□ 0.63
JHD1P40034 MDJ1YFL016C 1536 nt18.39■□□□□ 0.54
JHD1P40034 YCR051WYCR051W 669 nt18.07■□□□□ 0.48
JHD1P40034 YOL085CYOL085C 342 nt17.84■□□□□ 0.45
JHD1P40034 SCJ1YMR214W 1134 nt17.72■□□□□ 0.43
JHD1P40034 PKP1YIL042C 1185 nt17.48■□□□□ 0.39
JHD1P40034 RPP1BYDL130W 321 nt17.26■□□□□ 0.35
JHD1P40034 ATS1YAL020C 1002 nt17.24■□□□□ 0.35
JHD1P40034 TRN1tP(UGG)A 72 nt16.79■□□□□ 0.28
JHD1P40034 SUF9tP(UGG)F 72 nt16.79■□□□□ 0.28
JHD1P40034 SUF8tP(UGG)H 72 nt16.79■□□□□ 0.28
JHD1P40034 tP(UGG)LtP(UGG)L 72 nt16.79■□□□□ 0.28
JHD1P40034 SUF7tP(UGG)M 72 nt16.79■□□□□ 0.28
JHD1P40034 tP(UGG)N1tP(UGG)N1 72 nt16.79■□□□□ 0.28
JHD1P40034 tP(UGG)N2tP(UGG)N2 72 nt16.79■□□□□ 0.28
JHD1P40034 tP(UGG)O1tP(UGG)O1 72 nt16.79■□□□□ 0.28
JHD1P40034 SUF11tP(UGG)O2 72 nt16.79■□□□□ 0.28
JHD1P40034 CCC1YLR220W 969 nt16.64■□□□□ 0.25
JHD1P40034 DBP2YNL112W 1641 nt16.52■□□□□ 0.23
JHD1P40034 SCR1SCR1 522 nt16.44■□□□□ 0.22
JHD1P40034 PET122YER153C 765 nt16.38■□□□□ 0.21
JHD1P40034 tP(UGG)O3tP(UGG)O3 72 nt16.1■□□□□ 0.17
JHD1P40034 RTC3YHR087W 336 nt16.08■□□□□ 0.16
JHD1P40034 RRN5YLR141W 1092 nt16■□□□□ 0.15
JHD1P40034 PST2YDR032C 597 nt15.86■□□□□ 0.13
JHD1P40034 RSB1YOR049C 1065 nt15.86■□□□□ 0.13
JHD1P40034 RVS167YDR388W 1449 nt15.76■□□□□ 0.11
JHD1P40034 YER088W-BYER088W-B 147 nt15.68■□□□□ 0.1
JHD1P40034 YDJ1YNL064C 1230 nt15.59■□□□□ 0.09
JHD1P40034 YKL097CYKL097C 411 nt15.58■□□□□ 0.08
JHD1P40034 YBR190WYBR190W 312 nt15.57■□□□□ 0.08
JHD1P40034 SHR5YOL110W 714 nt15.32■□□□□ 0.04
JHD1P40034 GAR1YHR089C 618 nt15.12■□□□□ 0.01
JHD1P40034 SHU1YHL006C 453 nt15.05■□□□□ -0
JHD1P40034 YOR139CYOR139C 393 nt14.8□□□□□ -0.04
JHD1P40034 DEP1YAL013W 1218 nt14.65□□□□□ -0.06
JHD1P40034 YAL037C-BYAL037C-B 975 nt14.63□□□□□ -0.07
JHD1P40034 NPL3YDR432W 1245 nt14.59□□□□□ -0.07
JHD1P40034 TIR1YER011W 765 nt14.59□□□□□ -0.07
JHD1P40034 YNL208WYNL208W 600 nt14.53□□□□□ -0.08
JHD1P40034 URN1YPR152C 1398 nt14.5□□□□□ -0.09
JHD1P40034 RPN10YHR200W 807 nt14.48□□□□□ -0.09
JHD1P40034 SSA1YAL005C 1929 nt14.26□□□□□ -0.13
JHD1P40034 tM(CAU)CtM(CAU)C 72 nt14.2□□□□□ -0.14
JHD1P40034 IMT4tM(CAU)E 72 nt14.2□□□□□ -0.14
JHD1P40034 IMT3tM(CAU)J3 72 nt14.2□□□□□ -0.14
JHD1P40034 IMT1tM(CAU)O1 72 nt14.2□□□□□ -0.14
JHD1P40034 IMT2tM(CAU)P 72 nt14.2□□□□□ -0.14
JHD1P40034 YOL037CYOL037C 354 nt14.2□□□□□ -0.14
JHD1P40034 YGR021WYGR021W 873 nt14.19□□□□□ -0.14
JHD1P40034 OPI9YLR338W 858 nt14.17□□□□□ -0.14
JHD1P40034 MNP1YGL068W 585 nt14.13□□□□□ -0.15
JHD1P40034 HOM6YJR139C 1080 nt14.13□□□□□ -0.15
JHD1P40034 SRB2YHR041C 633 nt14.09□□□□□ -0.15
JHD1P40034 WWM1YFL010C 636 nt14.04□□□□□ -0.16
JHD1P40034 RKM5YLR137W 1104 nt13.93□□□□□ -0.18
JHD1P40034 SAH1YER043C 1350 nt13.9□□□□□ -0.18
JHD1P40034 MOT3YMR070W 1473 nt13.89□□□□□ -0.19
JHD1P40034 YJR018WYJR018W 363 nt13.89□□□□□ -0.19
JHD1P40034 BSC6YOL137W 1494 nt13.88□□□□□ -0.19
JHD1P40034 PUS2YGL063W 1113 nt13.88□□□□□ -0.19
JHD1P40034 YFL021C-AYFL021C-A 855 nt13.84□□□□□ -0.19
JHD1P40034 RPP2BYDR382W 333 nt13.81□□□□□ -0.2
JHD1P40034 YLR281CYLR281C 468 nt13.8□□□□□ -0.2
JHD1P40034 PUN1YLR414C 792 nt13.78□□□□□ -0.2
JHD1P40034 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
JHD1P40034 WHI5YOR083W 888 nt13.66□□□□□ -0.22
JHD1P40034 MRPL8YJL063C 717 nt13.61□□□□□ -0.23
JHD1P40034 BDH2YAL061W 1254 nt13.61□□□□□ -0.23
JHD1P40034 PUT4YOR348C 1884 nt13.61□□□□□ -0.23
JHD1P40034 SSA3YBL075C 1950 nt13.59□□□□□ -0.23
JHD1P40034 LSM3YLR438C-A 270 nt13.57□□□□□ -0.24
JHD1P40034 ARE1YCR048W 1833 nt13.56□□□□□ -0.24
JHD1P40034 FMP45YDL222C 930 nt13.52□□□□□ -0.25
JHD1P40034 PTC2YER089C 1395 nt13.48□□□□□ -0.25
JHD1P40034 DSK2YMR276W 1122 nt13.45□□□□□ -0.26
JHD1P40034 YCH1YGR203W 447 nt13.44□□□□□ -0.26
JHD1P40034 IMP2'YIL154C 1041 nt13.41□□□□□ -0.26
JHD1P40034 YPR011CYPR011C 981 nt13.41□□□□□ -0.26
JHD1P40034 YHR049C-AYHR049C-A 297 nt13.39□□□□□ -0.27
JHD1P40034 ADO1YJR105W 1023 nt13.39□□□□□ -0.27
JHD1P40034 INM2YDR287W 879 nt13.34□□□□□ -0.27
JHD1P40034 YLR236CYLR236C 324 nt13.33□□□□□ -0.28
JHD1P40034 UBX6YJL048C 1191 nt13.3□□□□□ -0.28
JHD1P40034 YBL100CYBL100C 315 nt13.28□□□□□ -0.28
JHD1P40034 TRM9YML014W 840 nt13.27□□□□□ -0.29
JHD1P40034 POA1YBR022W 534 nt13.26□□□□□ -0.29
JHD1P40034 YEL076C-AYEL076C-A 651 nt13.24□□□□□ -0.29
JHD1P40034 YEL076CYEL076C 651 nt13.24□□□□□ -0.29
JHD1P40034 YLR464WYLR464W 651 nt13.24□□□□□ -0.29
JHD1P40034 NAB2YGL122C 1578 nt13.24□□□□□ -0.29
JHD1P40034 YLR154C-GYLR154C-G 150 nt13.23□□□□□ -0.29
JHD1P40034 DAL1YIR027C 1383 nt13.18□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms