Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 YML009W-BYML009W-B 477 nt18.98■□□□□ 0.63
SPT20P50875 NSR1YGR159C 1245 nt18.82■□□□□ 0.6
SPT20P50875 NOP1YDL014W 984 nt18.54■□□□□ 0.56
SPT20P50875 YKL036CYKL036C 393 nt17.16■□□□□ 0.34
SPT20P50875 MDJ1YFL016C 1536 nt16.58■□□□□ 0.24
SPT20P50875 Q0297Q0297 156 nt16.23■□□□□ 0.19
SPT20P50875 SRX1YKL086W 384 nt16.17■□□□□ 0.18
SPT20P50875 YJL027CYJL027C 417 nt16.03■□□□□ 0.16
SPT20P50875 SCS3YGL126W 1143 nt15.63■□□□□ 0.09
SPT20P50875 YCR051WYCR051W 669 nt15.34■□□□□ 0.05
SPT20P50875 YOL085CYOL085C 342 nt14.84□□□□□ -0.03
SPT20P50875 DBP2YNL112W 1641 nt14.68□□□□□ -0.06
SPT20P50875 PKP1YIL042C 1185 nt14.58□□□□□ -0.08
SPT20P50875 RPP1BYDL130W 321 nt14.56□□□□□ -0.08
SPT20P50875 TRN1tP(UGG)A 72 nt14.55□□□□□ -0.08
SPT20P50875 SUF9tP(UGG)F 72 nt14.55□□□□□ -0.08
SPT20P50875 SUF8tP(UGG)H 72 nt14.55□□□□□ -0.08
SPT20P50875 tP(UGG)LtP(UGG)L 72 nt14.55□□□□□ -0.08
SPT20P50875 SUF7tP(UGG)M 72 nt14.55□□□□□ -0.08
SPT20P50875 tP(UGG)N1tP(UGG)N1 72 nt14.55□□□□□ -0.08
SPT20P50875 tP(UGG)N2tP(UGG)N2 72 nt14.55□□□□□ -0.08
SPT20P50875 tP(UGG)O1tP(UGG)O1 72 nt14.55□□□□□ -0.08
SPT20P50875 SUF11tP(UGG)O2 72 nt14.55□□□□□ -0.08
SPT20P50875 CCC1YLR220W 969 nt14.4□□□□□ -0.1
SPT20P50875 YBR190WYBR190W 312 nt14.28□□□□□ -0.12
SPT20P50875 ATS1YAL020C 1002 nt14.01□□□□□ -0.17
SPT20P50875 SCJ1YMR214W 1134 nt14.01□□□□□ -0.17
SPT20P50875 SSA3YBL075C 1950 nt13.98□□□□□ -0.17
SPT20P50875 RTC3YHR087W 336 nt13.92□□□□□ -0.18
SPT20P50875 RVS167YDR388W 1449 nt13.91□□□□□ -0.18
SPT20P50875 PET122YER153C 765 nt13.87□□□□□ -0.19
SPT20P50875 SCR1SCR1 522 nt13.81□□□□□ -0.2
SPT20P50875 tP(UGG)O3tP(UGG)O3 72 nt13.8□□□□□ -0.2
SPT20P50875 RRN5YLR141W 1092 nt13.49□□□□□ -0.25
SPT20P50875 SHR5YOL110W 714 nt13.42□□□□□ -0.26
SPT20P50875 YDJ1YNL064C 1230 nt13.37□□□□□ -0.27
SPT20P50875 RSB1YOR049C 1065 nt13.25□□□□□ -0.29
SPT20P50875 YER088W-BYER088W-B 147 nt13.23□□□□□ -0.29
SPT20P50875 PUT4YOR348C 1884 nt13.19□□□□□ -0.3
SPT20P50875 GAR1YHR089C 618 nt13.03□□□□□ -0.32
SPT20P50875 URN1YPR152C 1398 nt12.97□□□□□ -0.33
SPT20P50875 DEP1YAL013W 1218 nt12.97□□□□□ -0.33
SPT20P50875 PST2YDR032C 597 nt12.96□□□□□ -0.33
SPT20P50875 RPN10YHR200W 807 nt12.86□□□□□ -0.35
SPT20P50875 ARE1YCR048W 1833 nt12.84□□□□□ -0.35
SPT20P50875 YNL208WYNL208W 600 nt12.83□□□□□ -0.36
SPT20P50875 OPI9YLR338W 858 nt12.81□□□□□ -0.36
SPT20P50875 SAH1YER043C 1350 nt12.77□□□□□ -0.37
SPT20P50875 POA1YBR022W 534 nt12.72□□□□□ -0.37
SPT20P50875 YHR049C-AYHR049C-A 297 nt12.69□□□□□ -0.38
SPT20P50875 TIR1YER011W 765 nt12.6□□□□□ -0.39
SPT20P50875 BSC6YOL137W 1494 nt12.53□□□□□ -0.4
SPT20P50875 YKL097CYKL097C 411 nt12.52□□□□□ -0.41
SPT20P50875 PUN1YLR414C 792 nt12.45□□□□□ -0.42
SPT20P50875 SHU1YHL006C 453 nt12.4□□□□□ -0.42
SPT20P50875 YJR018WYJR018W 363 nt12.4□□□□□ -0.42
SPT20P50875 SSA1YAL005C 1929 nt12.4□□□□□ -0.42
SPT20P50875 BUD23YCR047C 828 nt12.36□□□□□ -0.43
SPT20P50875 PTC2YER089C 1395 nt12.31□□□□□ -0.44
SPT20P50875 NAB2YGL122C 1578 nt12.22□□□□□ -0.45
SPT20P50875 SPT5YML010W 3192 nt12.21□□□□□ -0.45
SPT20P50875 RPP2BYDR382W 333 nt12.21□□□□□ -0.45
SPT20P50875 SSA4YER103W 1929 nt12.19□□□□□ -0.46
SPT20P50875 SRB2YHR041C 633 nt12.19□□□□□ -0.46
SPT20P50875 YAL037C-BYAL037C-B 975 nt12.17□□□□□ -0.46
SPT20P50875 YJR120WYJR120W 351 nt12.16□□□□□ -0.46
SPT20P50875 YGR021WYGR021W 873 nt12.05□□□□□ -0.48
SPT20P50875 WWM1YFL010C 636 nt12.04□□□□□ -0.48
SPT20P50875 FIS1YIL065C 468 nt12.01□□□□□ -0.49
SPT20P50875 DAL1YIR027C 1383 nt12□□□□□ -0.49
SPT20P50875 YOR139CYOR139C 393 nt11.98□□□□□ -0.49
SPT20P50875 INM2YDR287W 879 nt11.97□□□□□ -0.49
SPT20P50875 HOM6YJR139C 1080 nt11.97□□□□□ -0.49
SPT20P50875 BDH2YAL061W 1254 nt11.95□□□□□ -0.5
SPT20P50875 FPR4YLR449W 1179 nt11.93□□□□□ -0.5
SPT20P50875 MNP1YGL068W 585 nt11.9□□□□□ -0.5
SPT20P50875 NPL3YDR432W 1245 nt11.89□□□□□ -0.51
SPT20P50875 YFL021C-AYFL021C-A 855 nt11.89□□□□□ -0.51
SPT20P50875 PHO4YFR034C 939 nt11.87□□□□□ -0.51
SPT20P50875 BDF1YLR399C 2061 nt11.84□□□□□ -0.51
SPT20P50875 YBL100CYBL100C 315 nt11.84□□□□□ -0.51
SPT20P50875 LSM3YLR438C-A 270 nt11.83□□□□□ -0.52
SPT20P50875 MEP2YNL142W 1500 nt11.81□□□□□ -0.52
SPT20P50875 RKM5YLR137W 1104 nt11.81□□□□□ -0.52
SPT20P50875 YOL037CYOL037C 354 nt11.8□□□□□ -0.52
SPT20P50875 YPS1YLR120C 1710 nt11.77□□□□□ -0.53
SPT20P50875 TRM9YML014W 840 nt11.72□□□□□ -0.53
SPT20P50875 FUN26YAL022C 1554 nt11.7□□□□□ -0.54
SPT20P50875 PAC11YDR488C 1602 nt11.67□□□□□ -0.54
SPT20P50875 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
SPT20P50875 YDR095CYDR095C 411 nt11.65□□□□□ -0.54
SPT20P50875 YHR165W-AYHR165W-A 312 nt11.65□□□□□ -0.54
SPT20P50875 DCW1YKL046C 1350 nt11.58□□□□□ -0.56
SPT20P50875 CCT6YDR188W 1641 nt11.58□□□□□ -0.56
SPT20P50875 ALF1YNL148C 765 nt11.54□□□□□ -0.56
SPT20P50875 SUF2tP(AGG)C 72 nt11.51□□□□□ -0.57
SPT20P50875 SUF10tP(AGG)N 72 nt11.51□□□□□ -0.57
SPT20P50875 tM(CAU)CtM(CAU)C 72 nt11.5□□□□□ -0.57
SPT20P50875 IMT4tM(CAU)E 72 nt11.5□□□□□ -0.57
SPT20P50875 IMT3tM(CAU)J3 72 nt11.5□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms