Protein–RNA interactions for Protein: P33336

SKN1, Beta-glucan synthesis-associated protein SKN1, yeastyeast

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN1P33336 YML009W-BYML009W-B 477 nt19.73■□□□□ 0.75
SKN1P33336 NSR1YGR159C 1245 nt19.41■□□□□ 0.7
SKN1P33336 NOP1YDL014W 984 nt19.25■□□□□ 0.67
SKN1P33336 YKL036CYKL036C 393 nt17.95■□□□□ 0.46
SKN1P33336 MDJ1YFL016C 1536 nt17.06■□□□□ 0.32
SKN1P33336 Q0297Q0297 156 nt16.91■□□□□ 0.3
SKN1P33336 SRX1YKL086W 384 nt16.82■□□□□ 0.28
SKN1P33336 YJL027CYJL027C 417 nt16.8■□□□□ 0.28
SKN1P33336 SCS3YGL126W 1143 nt16.44■□□□□ 0.22
SKN1P33336 YCR051WYCR051W 669 nt15.98■□□□□ 0.15
SKN1P33336 YOL085CYOL085C 342 nt15.53■□□□□ 0.08
SKN1P33336 PKP1YIL042C 1185 nt15.28■□□□□ 0.04
SKN1P33336 RPP1BYDL130W 321 nt15.18■□□□□ 0.02
SKN1P33336 DBP2YNL112W 1641 nt15.17■□□□□ 0.02
SKN1P33336 TRN1tP(UGG)A 72 nt15.1■□□□□ 0.01
SKN1P33336 SUF9tP(UGG)F 72 nt15.1■□□□□ 0.01
SKN1P33336 SUF8tP(UGG)H 72 nt15.1■□□□□ 0.01
SKN1P33336 tP(UGG)LtP(UGG)L 72 nt15.1■□□□□ 0.01
SKN1P33336 SUF7tP(UGG)M 72 nt15.1■□□□□ 0.01
SKN1P33336 tP(UGG)N1tP(UGG)N1 72 nt15.1■□□□□ 0.01
SKN1P33336 tP(UGG)N2tP(UGG)N2 72 nt15.1■□□□□ 0.01
SKN1P33336 tP(UGG)O1tP(UGG)O1 72 nt15.1■□□□□ 0.01
SKN1P33336 SUF11tP(UGG)O2 72 nt15.1■□□□□ 0.01
SKN1P33336 CCC1YLR220W 969 nt14.95□□□□□ -0.02
SKN1P33336 SCJ1YMR214W 1134 nt14.8□□□□□ -0.04
SKN1P33336 ATS1YAL020C 1002 nt14.75□□□□□ -0.05
SKN1P33336 YBR190WYBR190W 312 nt14.49□□□□□ -0.09
SKN1P33336 PET122YER153C 765 nt14.47□□□□□ -0.09
SKN1P33336 SCR1SCR1 522 nt14.39□□□□□ -0.11
SKN1P33336 tP(UGG)O3tP(UGG)O3 72 nt14.34□□□□□ -0.11
SKN1P33336 RVS167YDR388W 1449 nt14.33□□□□□ -0.11
SKN1P33336 RTC3YHR087W 336 nt14.19□□□□□ -0.14
SKN1P33336 RRN5YLR141W 1092 nt14.08□□□□□ -0.16
SKN1P33336 YDJ1YNL064C 1230 nt13.86□□□□□ -0.19
SKN1P33336 SHR5YOL110W 714 nt13.86□□□□□ -0.19
SKN1P33336 RSB1YOR049C 1065 nt13.86□□□□□ -0.19
SKN1P33336 YER088W-BYER088W-B 147 nt13.8□□□□□ -0.2
SKN1P33336 PST2YDR032C 597 nt13.62□□□□□ -0.23
SKN1P33336 GAR1YHR089C 618 nt13.54□□□□□ -0.24
SKN1P33336 DEP1YAL013W 1218 nt13.41□□□□□ -0.26
SKN1P33336 URN1YPR152C 1398 nt13.36□□□□□ -0.27
SKN1P33336 YNL208WYNL208W 600 nt13.22□□□□□ -0.29
SKN1P33336 RPN10YHR200W 807 nt13.21□□□□□ -0.29
SKN1P33336 SSA3YBL075C 1950 nt13.21□□□□□ -0.29
SKN1P33336 YKL097CYKL097C 411 nt13.2□□□□□ -0.3
SKN1P33336 OPI9YLR338W 858 nt13.12□□□□□ -0.31
SKN1P33336 PUT4YOR348C 1884 nt13.1□□□□□ -0.31
SKN1P33336 TIR1YER011W 765 nt13.07□□□□□ -0.32
SKN1P33336 SHU1YHL006C 453 nt13.03□□□□□ -0.32
SKN1P33336 SAH1YER043C 1350 nt12.98□□□□□ -0.33
SKN1P33336 SSA1YAL005C 1929 nt12.88□□□□□ -0.35
SKN1P33336 ARE1YCR048W 1833 nt12.83□□□□□ -0.35
SKN1P33336 YJR018WYJR018W 363 nt12.76□□□□□ -0.37
SKN1P33336 YAL037C-BYAL037C-B 975 nt12.76□□□□□ -0.37
SKN1P33336 PUN1YLR414C 792 nt12.75□□□□□ -0.37
SKN1P33336 SRB2YHR041C 633 nt12.68□□□□□ -0.38
SKN1P33336 YHR049C-AYHR049C-A 297 nt12.68□□□□□ -0.38
SKN1P33336 YOR139CYOR139C 393 nt12.63□□□□□ -0.39
SKN1P33336 POA1YBR022W 534 nt12.62□□□□□ -0.39
SKN1P33336 YJR120WYJR120W 351 nt12.59□□□□□ -0.39
SKN1P33336 RPP2BYDR382W 333 nt12.56□□□□□ -0.4
SKN1P33336 PTC2YER089C 1395 nt12.56□□□□□ -0.4
SKN1P33336 WWM1YFL010C 636 nt12.53□□□□□ -0.4
SKN1P33336 YGR021WYGR021W 873 nt12.53□□□□□ -0.4
SKN1P33336 NPL3YDR432W 1245 nt12.5□□□□□ -0.41
SKN1P33336 HOM6YJR139C 1080 nt12.49□□□□□ -0.41
SKN1P33336 MNP1YGL068W 585 nt12.46□□□□□ -0.41
SKN1P33336 BSC6YOL137W 1494 nt12.44□□□□□ -0.42
SKN1P33336 BUD23YCR047C 828 nt12.41□□□□□ -0.42
SKN1P33336 NAB2YGL122C 1578 nt12.36□□□□□ -0.43
SKN1P33336 BDH2YAL061W 1254 nt12.34□□□□□ -0.43
SKN1P33336 YOL037CYOL037C 354 nt12.34□□□□□ -0.43
SKN1P33336 YFL021C-AYFL021C-A 855 nt12.33□□□□□ -0.44
SKN1P33336 RKM5YLR137W 1104 nt12.3□□□□□ -0.44
SKN1P33336 INM2YDR287W 879 nt12.27□□□□□ -0.45
SKN1P33336 DAL1YIR027C 1383 nt12.24□□□□□ -0.45
SKN1P33336 FPR4YLR449W 1179 nt12.23□□□□□ -0.45
SKN1P33336 SPT5YML010W 3192 nt12.22□□□□□ -0.45
SKN1P33336 FIS1YIL065C 468 nt12.21□□□□□ -0.45
SKN1P33336 LSM3YLR438C-A 270 nt12.21□□□□□ -0.45
SKN1P33336 YBL100CYBL100C 315 nt12.2□□□□□ -0.46
SKN1P33336 PHO4YFR034C 939 nt12.12□□□□□ -0.47
SKN1P33336 tM(CAU)CtM(CAU)C 72 nt12.11□□□□□ -0.47
SKN1P33336 IMT4tM(CAU)E 72 nt12.11□□□□□ -0.47
SKN1P33336 IMT3tM(CAU)J3 72 nt12.11□□□□□ -0.47
SKN1P33336 IMT1tM(CAU)O1 72 nt12.11□□□□□ -0.47
SKN1P33336 IMT2tM(CAU)P 72 nt12.11□□□□□ -0.47
SKN1P33336 TRM9YML014W 840 nt12.07□□□□□ -0.48
SKN1P33336 FUN26YAL022C 1554 nt12.05□□□□□ -0.48
SKN1P33336 YLR281CYLR281C 468 nt12.03□□□□□ -0.48
SKN1P33336 PUS2YGL063W 1113 nt11.97□□□□□ -0.49
SKN1P33336 WHI5YOR083W 888 nt11.96□□□□□ -0.49
SKN1P33336 CCT6YDR188W 1641 nt11.94□□□□□ -0.5
SKN1P33336 SSA4YER103W 1929 nt11.94□□□□□ -0.5
SKN1P33336 ALF1YNL148C 765 nt11.85□□□□□ -0.51
SKN1P33336 SUF2tP(AGG)C 72 nt11.83□□□□□ -0.52
SKN1P33336 SUF10tP(AGG)N 72 nt11.83□□□□□ -0.52
SKN1P33336 YPS1YLR120C 1710 nt11.81□□□□□ -0.52
SKN1P33336 YLR154C-GYLR154C-G 150 nt11.8□□□□□ -0.52
SKN1P33336 YDR095CYDR095C 411 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms