Protein–RNA interactions for Protein: P02407

RPS17A, 40S ribosomal protein S17-A, yeastyeast

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS17AP02407 YML009W-BYML009W-B 477 nt19.46■□□□□ 0.71
RPS17AP02407 NSR1YGR159C 1245 nt19.35■□□□□ 0.69
RPS17AP02407 NOP1YDL014W 984 nt18.87■□□□□ 0.61
RPS17AP02407 YKL036CYKL036C 393 nt17.34■□□□□ 0.37
RPS17AP02407 MDJ1YFL016C 1536 nt17.3■□□□□ 0.36
RPS17AP02407 SRX1YKL086W 384 nt16.47■□□□□ 0.23
RPS17AP02407 Q0297Q0297 156 nt16.46■□□□□ 0.23
RPS17AP02407 YJL027CYJL027C 417 nt16.19■□□□□ 0.18
RPS17AP02407 SCS3YGL126W 1143 nt15.75■□□□□ 0.11
RPS17AP02407 YCR051WYCR051W 669 nt15.65■□□□□ 0.1
RPS17AP02407 DBP2YNL112W 1641 nt15.22■□□□□ 0.03
RPS17AP02407 YOL085CYOL085C 342 nt15.01□□□□□ -0.01
RPS17AP02407 TRN1tP(UGG)A 72 nt14.95□□□□□ -0.02
RPS17AP02407 SUF9tP(UGG)F 72 nt14.95□□□□□ -0.02
RPS17AP02407 SUF8tP(UGG)H 72 nt14.95□□□□□ -0.02
RPS17AP02407 tP(UGG)LtP(UGG)L 72 nt14.95□□□□□ -0.02
RPS17AP02407 SUF7tP(UGG)M 72 nt14.95□□□□□ -0.02
RPS17AP02407 tP(UGG)N1tP(UGG)N1 72 nt14.95□□□□□ -0.02
RPS17AP02407 tP(UGG)N2tP(UGG)N2 72 nt14.95□□□□□ -0.02
RPS17AP02407 tP(UGG)O1tP(UGG)O1 72 nt14.95□□□□□ -0.02
RPS17AP02407 SUF11tP(UGG)O2 72 nt14.95□□□□□ -0.02
RPS17AP02407 PKP1YIL042C 1185 nt14.82□□□□□ -0.04
RPS17AP02407 CCC1YLR220W 969 nt14.81□□□□□ -0.04
RPS17AP02407 RPP1BYDL130W 321 nt14.79□□□□□ -0.04
RPS17AP02407 YBR190WYBR190W 312 nt14.73□□□□□ -0.05
RPS17AP02407 RTC3YHR087W 336 nt14.45□□□□□ -0.1
RPS17AP02407 RVS167YDR388W 1449 nt14.36□□□□□ -0.11
RPS17AP02407 SSA3YBL075C 1950 nt14.31□□□□□ -0.12
RPS17AP02407 SCJ1YMR214W 1134 nt14.26□□□□□ -0.13
RPS17AP02407 PET122YER153C 765 nt14.15□□□□□ -0.14
RPS17AP02407 tP(UGG)O3tP(UGG)O3 72 nt14.11□□□□□ -0.15
RPS17AP02407 ATS1YAL020C 1002 nt14.04□□□□□ -0.16
RPS17AP02407 SCR1SCR1 522 nt13.99□□□□□ -0.17
RPS17AP02407 SHR5YOL110W 714 nt13.82□□□□□ -0.2
RPS17AP02407 RRN5YLR141W 1092 nt13.71□□□□□ -0.21
RPS17AP02407 YDJ1YNL064C 1230 nt13.64□□□□□ -0.23
RPS17AP02407 URN1YPR152C 1398 nt13.48□□□□□ -0.25
RPS17AP02407 DEP1YAL013W 1218 nt13.47□□□□□ -0.25
RPS17AP02407 YER088W-BYER088W-B 147 nt13.45□□□□□ -0.26
RPS17AP02407 RSB1YOR049C 1065 nt13.45□□□□□ -0.26
RPS17AP02407 PUT4YOR348C 1884 nt13.42□□□□□ -0.26
RPS17AP02407 GAR1YHR089C 618 nt13.38□□□□□ -0.27
RPS17AP02407 RPN10YHR200W 807 nt13.28□□□□□ -0.28
RPS17AP02407 OPI9YLR338W 858 nt13.28□□□□□ -0.28
RPS17AP02407 SAH1YER043C 1350 nt13.23□□□□□ -0.29
RPS17AP02407 YNL208WYNL208W 600 nt13.23□□□□□ -0.29
RPS17AP02407 ARE1YCR048W 1833 nt13.16□□□□□ -0.3
RPS17AP02407 YHR049C-AYHR049C-A 297 nt13.04□□□□□ -0.32
RPS17AP02407 POA1YBR022W 534 nt13.01□□□□□ -0.33
RPS17AP02407 PST2YDR032C 597 nt13□□□□□ -0.33
RPS17AP02407 TIR1YER011W 765 nt12.92□□□□□ -0.34
RPS17AP02407 PUN1YLR414C 792 nt12.92□□□□□ -0.34
RPS17AP02407 Q0182Q0182 405 nt12.9□□□□□ -0.34
RPS17AP02407 YJR018WYJR018W 363 nt12.85□□□□□ -0.35
RPS17AP02407 SSA1YAL005C 1929 nt12.77□□□□□ -0.37
RPS17AP02407 PTC2YER089C 1395 nt12.76□□□□□ -0.37
RPS17AP02407 BSC6YOL137W 1494 nt12.76□□□□□ -0.37
RPS17AP02407 BUD23YCR047C 828 nt12.74□□□□□ -0.37
RPS17AP02407 YJR120WYJR120W 351 nt12.62□□□□□ -0.39
RPS17AP02407 RPP2BYDR382W 333 nt12.59□□□□□ -0.39
RPS17AP02407 NAB2YGL122C 1578 nt12.59□□□□□ -0.39
RPS17AP02407 SRB2YHR041C 633 nt12.54□□□□□ -0.4
RPS17AP02407 SHU1YHL006C 453 nt12.51□□□□□ -0.41
RPS17AP02407 MOT3YMR070W 1473 nt12.49□□□□□ -0.41
RPS17AP02407 YKL097CYKL097C 411 nt12.49□□□□□ -0.41
RPS17AP02407 FIS1YIL065C 468 nt12.44□□□□□ -0.42
RPS17AP02407 FPR4YLR449W 1179 nt12.43□□□□□ -0.42
RPS17AP02407 DAL1YIR027C 1383 nt12.43□□□□□ -0.42
RPS17AP02407 INM2YDR287W 879 nt12.39□□□□□ -0.43
RPS17AP02407 WWM1YFL010C 636 nt12.34□□□□□ -0.43
RPS17AP02407 YAL037C-BYAL037C-B 975 nt12.34□□□□□ -0.43
RPS17AP02407 PHO4YFR034C 939 nt12.32□□□□□ -0.44
RPS17AP02407 BDH2YAL061W 1254 nt12.31□□□□□ -0.44
RPS17AP02407 YBL100CYBL100C 315 nt12.29□□□□□ -0.44
RPS17AP02407 YGR021WYGR021W 873 nt12.26□□□□□ -0.45
RPS17AP02407 SSA4YER103W 1929 nt12.25□□□□□ -0.45
RPS17AP02407 HOM6YJR139C 1080 nt12.2□□□□□ -0.46
RPS17AP02407 SPT5YML010W 3192 nt12.2□□□□□ -0.46
RPS17AP02407 MNP1YGL068W 585 nt12.16□□□□□ -0.46
RPS17AP02407 YFL021C-AYFL021C-A 855 nt12.14□□□□□ -0.47
RPS17AP02407 FUN26YAL022C 1554 nt12.13□□□□□ -0.47
RPS17AP02407 LSM3YLR438C-A 270 nt12.12□□□□□ -0.47
RPS17AP02407 TRM9YML014W 840 nt12.08□□□□□ -0.48
RPS17AP02407 YPS1YLR120C 1710 nt12.08□□□□□ -0.48
RPS17AP02407 PAC11YDR488C 1602 nt12.04□□□□□ -0.48
RPS17AP02407 RKM5YLR137W 1104 nt12.03□□□□□ -0.48
RPS17AP02407 YDR095CYDR095C 411 nt12.01□□□□□ -0.49
RPS17AP02407 ALF1YNL148C 765 nt12□□□□□ -0.49
RPS17AP02407 YHR165W-AYHR165W-A 312 nt11.99□□□□□ -0.49
RPS17AP02407 YOR139CYOR139C 393 nt11.98□□□□□ -0.49
RPS17AP02407 CCT6YDR188W 1641 nt11.96□□□□□ -0.5
RPS17AP02407 BDF1YLR399C 2061 nt11.96□□□□□ -0.5
RPS17AP02407 MEP2YNL142W 1500 nt11.96□□□□□ -0.5
RPS17AP02407 NPL3YDR432W 1245 nt11.93□□□□□ -0.5
RPS17AP02407 YOL037CYOL037C 354 nt11.92□□□□□ -0.5
RPS17AP02407 NVJ2YPR091C 2313 nt11.91□□□□□ -0.5
RPS17AP02407 SUF2tP(AGG)C 72 nt11.88□□□□□ -0.51
RPS17AP02407 SUF10tP(AGG)N 72 nt11.88□□□□□ -0.51
RPS17AP02407 DCW1YKL046C 1350 nt11.79□□□□□ -0.52
RPS17AP02407 RPP2AYOL039W 321 nt11.78□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms