Protein–RNA interactions for Protein: P36004

KKQ8, Probable serine/threonine-protein kinase KKQ8, yeastyeast

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KKQ8P36004 YML009W-BYML009W-B 477 nt19.7■□□□□ 0.74
KKQ8P36004 NSR1YGR159C 1245 nt19.55■□□□□ 0.72
KKQ8P36004 NOP1YDL014W 984 nt19.13■□□□□ 0.65
KKQ8P36004 YKL036CYKL036C 393 nt17.66■□□□□ 0.42
KKQ8P36004 MDJ1YFL016C 1536 nt17.39■□□□□ 0.37
KKQ8P36004 Q0297Q0297 156 nt16.73■□□□□ 0.27
KKQ8P36004 SRX1YKL086W 384 nt16.72■□□□□ 0.27
KKQ8P36004 YJL027CYJL027C 417 nt16.5■□□□□ 0.23
KKQ8P36004 SCS3YGL126W 1143 nt16.07■□□□□ 0.16
KKQ8P36004 YCR051WYCR051W 669 nt15.9■□□□□ 0.14
KKQ8P36004 DBP2YNL112W 1641 nt15.36■□□□□ 0.05
KKQ8P36004 YOL085CYOL085C 342 nt15.3■□□□□ 0.04
KKQ8P36004 TRN1tP(UGG)A 72 nt15.11■□□□□ 0.01
KKQ8P36004 SUF9tP(UGG)F 72 nt15.11■□□□□ 0.01
KKQ8P36004 SUF8tP(UGG)H 72 nt15.11■□□□□ 0.01
KKQ8P36004 tP(UGG)LtP(UGG)L 72 nt15.11■□□□□ 0.01
KKQ8P36004 SUF7tP(UGG)M 72 nt15.11■□□□□ 0.01
KKQ8P36004 tP(UGG)N1tP(UGG)N1 72 nt15.11■□□□□ 0.01
KKQ8P36004 tP(UGG)N2tP(UGG)N2 72 nt15.11■□□□□ 0.01
KKQ8P36004 tP(UGG)O1tP(UGG)O1 72 nt15.11■□□□□ 0.01
KKQ8P36004 SUF11tP(UGG)O2 72 nt15.11■□□□□ 0.01
KKQ8P36004 PKP1YIL042C 1185 nt15.11■□□□□ 0.01
KKQ8P36004 RPP1BYDL130W 321 nt15.02■□□□□ -0
KKQ8P36004 CCC1YLR220W 969 nt15.02■□□□□ -0
KKQ8P36004 YBR190WYBR190W 312 nt14.8□□□□□ -0.04
KKQ8P36004 RTC3YHR087W 336 nt14.52□□□□□ -0.09
KKQ8P36004 RVS167YDR388W 1449 nt14.45□□□□□ -0.1
KKQ8P36004 PET122YER153C 765 nt14.37□□□□□ -0.11
KKQ8P36004 ATS1YAL020C 1002 nt14.37□□□□□ -0.11
KKQ8P36004 SCJ1YMR214W 1134 nt14.37□□□□□ -0.11
KKQ8P36004 tP(UGG)O3tP(UGG)O3 72 nt14.31□□□□□ -0.12
KKQ8P36004 SCR1SCR1 522 nt14.21□□□□□ -0.13
KKQ8P36004 RRN5YLR141W 1092 nt13.98□□□□□ -0.17
KKQ8P36004 SHR5YOL110W 714 nt13.94□□□□□ -0.18
KKQ8P36004 YDJ1YNL064C 1230 nt13.82□□□□□ -0.2
KKQ8P36004 YER088W-BYER088W-B 147 nt13.69□□□□□ -0.22
KKQ8P36004 RSB1YOR049C 1065 nt13.68□□□□□ -0.22
KKQ8P36004 DEP1YAL013W 1218 nt13.6□□□□□ -0.23
KKQ8P36004 URN1YPR152C 1398 nt13.58□□□□□ -0.24
KKQ8P36004 GAR1YHR089C 618 nt13.56□□□□□ -0.24
KKQ8P36004 PUT4YOR348C 1884 nt13.43□□□□□ -0.26
KKQ8P36004 RPN10YHR200W 807 nt13.35□□□□□ -0.27
KKQ8P36004 OPI9YLR338W 858 nt13.35□□□□□ -0.27
KKQ8P36004 YNL208WYNL208W 600 nt13.34□□□□□ -0.27
KKQ8P36004 PST2YDR032C 597 nt13.31□□□□□ -0.28
KKQ8P36004 SAH1YER043C 1350 nt13.3□□□□□ -0.28
KKQ8P36004 ARE1YCR048W 1833 nt13.2□□□□□ -0.3
KKQ8P36004 TIR1YER011W 765 nt13.08□□□□□ -0.32
KKQ8P36004 POA1YBR022W 534 nt13.06□□□□□ -0.32
KKQ8P36004 YHR049C-AYHR049C-A 297 nt13.05□□□□□ -0.32
KKQ8P36004 PUN1YLR414C 792 nt12.96□□□□□ -0.33
KKQ8P36004 YJR018WYJR018W 363 nt12.95□□□□□ -0.34
KKQ8P36004 SSA1YAL005C 1929 nt12.93□□□□□ -0.34
KKQ8P36004 PTC2YER089C 1395 nt12.83□□□□□ -0.36
KKQ8P36004 SHU1YHL006C 453 nt12.78□□□□□ -0.36
KKQ8P36004 YKL097CYKL097C 411 nt12.78□□□□□ -0.36
KKQ8P36004 BUD23YCR047C 828 nt12.77□□□□□ -0.37
KKQ8P36004 BSC6YOL137W 1494 nt12.75□□□□□ -0.37
KKQ8P36004 YJR120WYJR120W 351 nt12.73□□□□□ -0.37
KKQ8P36004 SRB2YHR041C 633 nt12.72□□□□□ -0.37
KKQ8P36004 RPP2BYDR382W 333 nt12.68□□□□□ -0.38
KKQ8P36004 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
KKQ8P36004 YAL037C-BYAL037C-B 975 nt12.62□□□□□ -0.39
KKQ8P36004 WWM1YFL010C 636 nt12.52□□□□□ -0.41
KKQ8P36004 FPR4YLR449W 1179 nt12.5□□□□□ -0.41
KKQ8P36004 DAL1YIR027C 1383 nt12.48□□□□□ -0.41
KKQ8P36004 INM2YDR287W 879 nt12.48□□□□□ -0.41
KKQ8P36004 SSA3YBL075C 1950 nt12.46□□□□□ -0.41
KKQ8P36004 FIS1YIL065C 468 nt12.44□□□□□ -0.42
KKQ8P36004 BDH2YAL061W 1254 nt12.42□□□□□ -0.42
KKQ8P36004 YGR021WYGR021W 873 nt12.41□□□□□ -0.42
KKQ8P36004 HOM6YJR139C 1080 nt12.38□□□□□ -0.43
KKQ8P36004 PHO4YFR034C 939 nt12.36□□□□□ -0.43
KKQ8P36004 YBL100CYBL100C 315 nt12.36□□□□□ -0.43
KKQ8P36004 MNP1YGL068W 585 nt12.34□□□□□ -0.43
KKQ8P36004 YFL021C-AYFL021C-A 855 nt12.29□□□□□ -0.44
KKQ8P36004 YOR139CYOR139C 393 nt12.27□□□□□ -0.45
KKQ8P36004 LSM3YLR438C-A 270 nt12.25□□□□□ -0.45
KKQ8P36004 FUN26YAL022C 1554 nt12.22□□□□□ -0.45
KKQ8P36004 TRM9YML014W 840 nt12.21□□□□□ -0.45
KKQ8P36004 RKM5YLR137W 1104 nt12.2□□□□□ -0.46
KKQ8P36004 NPL3YDR432W 1245 nt12.18□□□□□ -0.46
KKQ8P36004 YPS1YLR120C 1710 nt12.11□□□□□ -0.47
KKQ8P36004 YOL037CYOL037C 354 nt12.1□□□□□ -0.47
KKQ8P36004 SPT5YML010W 3192 nt12.08□□□□□ -0.48
KKQ8P36004 ALF1YNL148C 765 nt12.06□□□□□ -0.48
KKQ8P36004 CCT6YDR188W 1641 nt12.04□□□□□ -0.48
KKQ8P36004 YDR095CYDR095C 411 nt12.03□□□□□ -0.48
KKQ8P36004 YHR165W-AYHR165W-A 312 nt12□□□□□ -0.49
KKQ8P36004 SUF2tP(AGG)C 72 nt11.95□□□□□ -0.5
KKQ8P36004 SUF10tP(AGG)N 72 nt11.95□□□□□ -0.5
KKQ8P36004 MEP2YNL142W 1500 nt11.95□□□□□ -0.5
KKQ8P36004 SIS1YNL007C 1059 nt11.85□□□□□ -0.51
KKQ8P36004 YLR281CYLR281C 468 nt11.84□□□□□ -0.51
KKQ8P36004 RPP2AYOL039W 321 nt11.82□□□□□ -0.52
KKQ8P36004 WHI5YOR083W 888 nt11.82□□□□□ -0.52
KKQ8P36004 tM(CAU)CtM(CAU)C 72 nt11.81□□□□□ -0.52
KKQ8P36004 IMT4tM(CAU)E 72 nt11.81□□□□□ -0.52
KKQ8P36004 IMT3tM(CAU)J3 72 nt11.81□□□□□ -0.52
KKQ8P36004 IMT1tM(CAU)O1 72 nt11.81□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms