Protein–RNA interactions for Protein: P0CX56

RPS18B, 40S ribosomal protein S18-B, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS18BP0CX56 NSR1YGR159C 1245 nt17.9■□□□□ 0.46
RPS18BP0CX56 YML009W-BYML009W-B 477 nt17.56■□□□□ 0.4
RPS18BP0CX56 NOP1YDL014W 984 nt16.89■□□□□ 0.29
RPS18BP0CX56 MDJ1YFL016C 1536 nt16.3■□□□□ 0.2
RPS18BP0CX56 YKL036CYKL036C 393 nt15.17■□□□□ 0.02
RPS18BP0CX56 YJL027CYJL027C 417 nt14.98□□□□□ -0.01
RPS18BP0CX56 SRX1YKL086W 384 nt14.79□□□□□ -0.04
RPS18BP0CX56 Q0297Q0297 156 nt14.69□□□□□ -0.06
RPS18BP0CX56 DBP2YNL112W 1641 nt14.3□□□□□ -0.12
RPS18BP0CX56 YBR190WYBR190W 312 nt14.04□□□□□ -0.16
RPS18BP0CX56 YCR051WYCR051W 669 nt13.94□□□□□ -0.18
RPS18BP0CX56 SSA3YBL075C 1950 nt13.68□□□□□ -0.22
RPS18BP0CX56 TRN1tP(UGG)A 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 SUF9tP(UGG)F 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 SUF8tP(UGG)H 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 tP(UGG)LtP(UGG)L 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 SUF7tP(UGG)M 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 tP(UGG)N1tP(UGG)N1 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 tP(UGG)N2tP(UGG)N2 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 tP(UGG)O1tP(UGG)O1 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 SUF11tP(UGG)O2 72 nt13.66□□□□□ -0.22
RPS18BP0CX56 RTC3YHR087W 336 nt13.64□□□□□ -0.23
RPS18BP0CX56 SCS3YGL126W 1143 nt13.58□□□□□ -0.24
RPS18BP0CX56 CCC1YLR220W 969 nt13.45□□□□□ -0.26
RPS18BP0CX56 RVS167YDR388W 1449 nt13.24□□□□□ -0.29
RPS18BP0CX56 YOL085CYOL085C 342 nt13.18□□□□□ -0.3
RPS18BP0CX56 RPP1BYDL130W 321 nt13.16□□□□□ -0.3
RPS18BP0CX56 SCJ1YMR214W 1134 nt13.15□□□□□ -0.3
RPS18BP0CX56 PUT4YOR348C 1884 nt13.14□□□□□ -0.31
RPS18BP0CX56 PKP1YIL042C 1185 nt13□□□□□ -0.33
RPS18BP0CX56 tP(UGG)O3tP(UGG)O3 72 nt12.76□□□□□ -0.37
RPS18BP0CX56 ARE1YCR048W 1833 nt12.75□□□□□ -0.37
RPS18BP0CX56 SHR5YOL110W 714 nt12.72□□□□□ -0.37
RPS18BP0CX56 POA1YBR022W 534 nt12.65□□□□□ -0.38
RPS18BP0CX56 URN1YPR152C 1398 nt12.64□□□□□ -0.39
RPS18BP0CX56 PET122YER153C 765 nt12.63□□□□□ -0.39
RPS18BP0CX56 SAH1YER043C 1350 nt12.6□□□□□ -0.39
RPS18BP0CX56 OPI9YLR338W 858 nt12.58□□□□□ -0.4
RPS18BP0CX56 YHR049C-AYHR049C-A 297 nt12.54□□□□□ -0.4
RPS18BP0CX56 DEP1YAL013W 1218 nt12.48□□□□□ -0.41
RPS18BP0CX56 BSC6YOL137W 1494 nt12.46□□□□□ -0.41
RPS18BP0CX56 YDJ1YNL064C 1230 nt12.36□□□□□ -0.43
RPS18BP0CX56 SPT5YML010W 3192 nt12.36□□□□□ -0.43
RPS18BP0CX56 SCR1SCR1 522 nt12.32□□□□□ -0.44
RPS18BP0CX56 RPN10YHR200W 807 nt12.31□□□□□ -0.44
RPS18BP0CX56 YNL208WYNL208W 600 nt12.25□□□□□ -0.45
RPS18BP0CX56 RRN5YLR141W 1092 nt12.21□□□□□ -0.45
RPS18BP0CX56 BUD23YCR047C 828 nt12.18□□□□□ -0.46
RPS18BP0CX56 PUN1YLR414C 792 nt12.18□□□□□ -0.46
RPS18BP0CX56 PTC2YER089C 1395 nt12.11□□□□□ -0.47
RPS18BP0CX56 GAR1YHR089C 618 nt12.11□□□□□ -0.47
RPS18BP0CX56 SSA4YER103W 1929 nt12.05□□□□□ -0.48
RPS18BP0CX56 YJR018WYJR018W 363 nt12.04□□□□□ -0.48
RPS18BP0CX56 NAB2YGL122C 1578 nt12.03□□□□□ -0.48
RPS18BP0CX56 ATS1YAL020C 1002 nt12.02□□□□□ -0.49
RPS18BP0CX56 YER088W-BYER088W-B 147 nt11.98□□□□□ -0.49
RPS18BP0CX56 FIS1YIL065C 468 nt11.83□□□□□ -0.52
RPS18BP0CX56 YJR120WYJR120W 351 nt11.81□□□□□ -0.52
RPS18BP0CX56 RSB1YOR049C 1065 nt11.78□□□□□ -0.52
RPS18BP0CX56 DAL1YIR027C 1383 nt11.78□□□□□ -0.52
RPS18BP0CX56 MEP2YNL142W 1500 nt11.77□□□□□ -0.52
RPS18BP0CX56 TIR1YER011W 765 nt11.75□□□□□ -0.53
RPS18BP0CX56 SSA1YAL005C 1929 nt11.73□□□□□ -0.53
RPS18BP0CX56 BDF1YLR399C 2061 nt11.68□□□□□ -0.54
RPS18BP0CX56 FPR4YLR449W 1179 nt11.68□□□□□ -0.54
RPS18BP0CX56 INM2YDR287W 879 nt11.67□□□□□ -0.54
RPS18BP0CX56 PHO4YFR034C 939 nt11.67□□□□□ -0.54
RPS18BP0CX56 YPS1YLR120C 1710 nt11.63□□□□□ -0.55
RPS18BP0CX56 RPP2BYDR382W 333 nt11.62□□□□□ -0.55
RPS18BP0CX56 DCW1YKL046C 1350 nt11.57□□□□□ -0.56
RPS18BP0CX56 TAT1YBR069C 1860 nt11.51□□□□□ -0.57
RPS18BP0CX56 YDR095CYDR095C 411 nt11.48□□□□□ -0.57
RPS18BP0CX56 SRB2YHR041C 633 nt11.48□□□□□ -0.57
RPS18BP0CX56 YHR165W-AYHR165W-A 312 nt11.47□□□□□ -0.57
RPS18BP0CX56 YBL100CYBL100C 315 nt11.47□□□□□ -0.57
RPS18BP0CX56 PAC11YDR488C 1602 nt11.46□□□□□ -0.57
RPS18BP0CX56 EMI2YDR516C 1503 nt11.4□□□□□ -0.59
RPS18BP0CX56 YBR220CYBR220C 1683 nt11.38□□□□□ -0.59
RPS18BP0CX56 BDH2YAL061W 1254 nt11.37□□□□□ -0.59
RPS18BP0CX56 NVJ2YPR091C 2313 nt11.35□□□□□ -0.59
RPS18BP0CX56 FUN26YAL022C 1554 nt11.33□□□□□ -0.6
RPS18BP0CX56 PTP1YDL230W 1008 nt11.31□□□□□ -0.6
RPS18BP0CX56 YMR090WYMR090W 684 nt11.31□□□□□ -0.6
RPS18BP0CX56 CAC2YML102W 1407 nt11.29□□□□□ -0.6
RPS18BP0CX56 YDL221WYDL221W 552 nt11.28□□□□□ -0.6
RPS18BP0CX56 PST2YDR032C 597 nt11.25□□□□□ -0.61
RPS18BP0CX56 RPP2AYOL039W 321 nt11.25□□□□□ -0.61
RPS18BP0CX56 SDH1YKL148C 1923 nt11.25□□□□□ -0.61
RPS18BP0CX56 ALF1YNL148C 765 nt11.21□□□□□ -0.61
RPS18BP0CX56 TRM9YML014W 840 nt11.2□□□□□ -0.62
RPS18BP0CX56 WWM1YFL010C 636 nt11.16□□□□□ -0.62
RPS18BP0CX56 CCT6YDR188W 1641 nt11.16□□□□□ -0.62
RPS18BP0CX56 LSM3YLR438C-A 270 nt11.14□□□□□ -0.63
RPS18BP0CX56 SIS1YNL007C 1059 nt11.14□□□□□ -0.63
RPS18BP0CX56 IRC15YPL017C 1500 nt11.12□□□□□ -0.63
RPS18BP0CX56 SCC4YER147C 1875 nt11.1□□□□□ -0.63
RPS18BP0CX56 SUF2tP(AGG)C 72 nt11.04□□□□□ -0.64
RPS18BP0CX56 SUF10tP(AGG)N 72 nt11.04□□□□□ -0.64
RPS18BP0CX56 PCH2YBR186W 1695 nt11.04□□□□□ -0.64
RPS18BP0CX56 GIS3YLR094C 1509 nt11.04□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms