Protein–RNA interactions for Protein: P38279

RTC2, Probable vacuolar amino acid transporter YPQ3, yeastyeast

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTC2P38279 NSR1YGR159C 1245 nt18.46■□□□□ 0.55
RTC2P38279 YML009W-BYML009W-B 477 nt18.32■□□□□ 0.52
RTC2P38279 NOP1YDL014W 984 nt17.65■□□□□ 0.42
RTC2P38279 MDJ1YFL016C 1536 nt16.7■□□□□ 0.26
RTC2P38279 YKL036CYKL036C 393 nt16.08■□□□□ 0.16
RTC2P38279 SRX1YKL086W 384 nt15.49■□□□□ 0.07
RTC2P38279 Q0297Q0297 156 nt15.44■□□□□ 0.06
RTC2P38279 YJL027CYJL027C 417 nt15.32■□□□□ 0.04
RTC2P38279 DBP2YNL112W 1641 nt14.72□□□□□ -0.05
RTC2P38279 YCR051WYCR051W 669 nt14.62□□□□□ -0.07
RTC2P38279 SCS3YGL126W 1143 nt14.53□□□□□ -0.08
RTC2P38279 YBR190WYBR190W 312 nt14.27□□□□□ -0.13
RTC2P38279 TRN1tP(UGG)A 72 nt14.2□□□□□ -0.14
RTC2P38279 SUF9tP(UGG)F 72 nt14.2□□□□□ -0.14
RTC2P38279 SUF8tP(UGG)H 72 nt14.2□□□□□ -0.14
RTC2P38279 tP(UGG)LtP(UGG)L 72 nt14.2□□□□□ -0.14
RTC2P38279 SUF7tP(UGG)M 72 nt14.2□□□□□ -0.14
RTC2P38279 tP(UGG)N1tP(UGG)N1 72 nt14.2□□□□□ -0.14
RTC2P38279 tP(UGG)N2tP(UGG)N2 72 nt14.2□□□□□ -0.14
RTC2P38279 tP(UGG)O1tP(UGG)O1 72 nt14.2□□□□□ -0.14
RTC2P38279 SUF11tP(UGG)O2 72 nt14.2□□□□□ -0.14
RTC2P38279 CCC1YLR220W 969 nt13.98□□□□□ -0.17
RTC2P38279 YOL085CYOL085C 342 nt13.98□□□□□ -0.17
RTC2P38279 RTC3YHR087W 336 nt13.88□□□□□ -0.19
RTC2P38279 RPP1BYDL130W 321 nt13.84□□□□□ -0.19
RTC2P38279 PKP1YIL042C 1185 nt13.78□□□□□ -0.2
RTC2P38279 SCJ1YMR214W 1134 nt13.65□□□□□ -0.22
RTC2P38279 RVS167YDR388W 1449 nt13.63□□□□□ -0.23
RTC2P38279 SSA3YBL075C 1950 nt13.4□□□□□ -0.26
RTC2P38279 tP(UGG)O3tP(UGG)O3 72 nt13.32□□□□□ -0.28
RTC2P38279 PET122YER153C 765 nt13.29□□□□□ -0.28
RTC2P38279 PUT4YOR348C 1884 nt13.24□□□□□ -0.29
RTC2P38279 SHR5YOL110W 714 nt13.15□□□□□ -0.3
RTC2P38279 SCR1SCR1 522 nt12.97□□□□□ -0.33
RTC2P38279 URN1YPR152C 1398 nt12.94□□□□□ -0.34
RTC2P38279 ARE1YCR048W 1833 nt12.91□□□□□ -0.34
RTC2P38279 ATS1YAL020C 1002 nt12.91□□□□□ -0.34
RTC2P38279 YDJ1YNL064C 1230 nt12.88□□□□□ -0.35
RTC2P38279 DEP1YAL013W 1218 nt12.87□□□□□ -0.35
RTC2P38279 RRN5YLR141W 1092 nt12.85□□□□□ -0.35
RTC2P38279 OPI9YLR338W 858 nt12.83□□□□□ -0.36
RTC2P38279 SAH1YER043C 1350 nt12.82□□□□□ -0.36
RTC2P38279 POA1YBR022W 534 nt12.76□□□□□ -0.37
RTC2P38279 YHR049C-AYHR049C-A 297 nt12.71□□□□□ -0.37
RTC2P38279 GAR1YHR089C 618 nt12.63□□□□□ -0.39
RTC2P38279 RPN10YHR200W 807 nt12.62□□□□□ -0.39
RTC2P38279 YNL208WYNL208W 600 nt12.62□□□□□ -0.39
RTC2P38279 YER088W-BYER088W-B 147 nt12.61□□□□□ -0.39
RTC2P38279 BSC6YOL137W 1494 nt12.55□□□□□ -0.4
RTC2P38279 RSB1YOR049C 1065 nt12.47□□□□□ -0.41
RTC2P38279 PUN1YLR414C 792 nt12.42□□□□□ -0.42
RTC2P38279 PTC2YER089C 1395 nt12.34□□□□□ -0.43
RTC2P38279 BUD23YCR047C 828 nt12.34□□□□□ -0.43
RTC2P38279 YJR018WYJR018W 363 nt12.32□□□□□ -0.44
RTC2P38279 SPT5YML010W 3192 nt12.28□□□□□ -0.44
RTC2P38279 TIR1YER011W 765 nt12.22□□□□□ -0.45
RTC2P38279 YJR120WYJR120W 351 nt12.2□□□□□ -0.46
RTC2P38279 NAB2YGL122C 1578 nt12.2□□□□□ -0.46
RTC2P38279 SSA1YAL005C 1929 nt12.18□□□□□ -0.46
RTC2P38279 FIS1YIL065C 468 nt12.09□□□□□ -0.47
RTC2P38279 PST2YDR032C 597 nt12.03□□□□□ -0.48
RTC2P38279 SRB2YHR041C 633 nt12.01□□□□□ -0.49
RTC2P38279 DAL1YIR027C 1383 nt12□□□□□ -0.49
RTC2P38279 SSA4YER103W 1929 nt11.97□□□□□ -0.49
RTC2P38279 RPP2BYDR382W 333 nt11.94□□□□□ -0.5
RTC2P38279 PHO4YFR034C 939 nt11.91□□□□□ -0.5
RTC2P38279 FPR4YLR449W 1179 nt11.91□□□□□ -0.5
RTC2P38279 INM2YDR287W 879 nt11.9□□□□□ -0.5
RTC2P38279 MEP2YNL142W 1500 nt11.81□□□□□ -0.52
RTC2P38279 YPS1YLR120C 1710 nt11.79□□□□□ -0.52
RTC2P38279 YBL100CYBL100C 315 nt11.76□□□□□ -0.53
RTC2P38279 BDH2YAL061W 1254 nt11.72□□□□□ -0.53
RTC2P38279 YDR095CYDR095C 411 nt11.68□□□□□ -0.54
RTC2P38279 WWM1YFL010C 636 nt11.66□□□□□ -0.54
RTC2P38279 DCW1YKL046C 1350 nt11.65□□□□□ -0.55
RTC2P38279 FUN26YAL022C 1554 nt11.62□□□□□ -0.55
RTC2P38279 SHU1YHL006C 453 nt11.61□□□□□ -0.55
RTC2P38279 YHR165W-AYHR165W-A 312 nt11.61□□□□□ -0.55
RTC2P38279 BDF1YLR399C 2061 nt11.55□□□□□ -0.56
RTC2P38279 LSM3YLR438C-A 270 nt11.5□□□□□ -0.57
RTC2P38279 TRM9YML014W 840 nt11.5□□□□□ -0.57
RTC2P38279 PTP1YDL230W 1008 nt11.49□□□□□ -0.57
RTC2P38279 YAL037C-BYAL037C-B 975 nt11.49□□□□□ -0.57
RTC2P38279 HOM6YJR139C 1080 nt11.47□□□□□ -0.57
RTC2P38279 CCT6YDR188W 1641 nt11.46□□□□□ -0.57
RTC2P38279 EMI2YDR516C 1503 nt11.46□□□□□ -0.57
RTC2P38279 YGR021WYGR021W 873 nt11.46□□□□□ -0.57
RTC2P38279 YFL021C-AYFL021C-A 855 nt11.45□□□□□ -0.58
RTC2P38279 ALF1YNL148C 765 nt11.45□□□□□ -0.58
RTC2P38279 CAC2YML102W 1407 nt11.43□□□□□ -0.58
RTC2P38279 RPP2AYOL039W 321 nt11.43□□□□□ -0.58
RTC2P38279 TAT1YBR069C 1860 nt11.4□□□□□ -0.58
RTC2P38279 MNP1YGL068W 585 nt11.38□□□□□ -0.59
RTC2P38279 SIS1YNL007C 1059 nt11.38□□□□□ -0.59
RTC2P38279 YBR220CYBR220C 1683 nt11.36□□□□□ -0.59
RTC2P38279 YDL221WYDL221W 552 nt11.36□□□□□ -0.59
RTC2P38279 Q0182Q0182 405 nt11.35□□□□□ -0.59
RTC2P38279 YKL097CYKL097C 411 nt11.34□□□□□ -0.59
RTC2P38279 SUF2tP(AGG)C 72 nt11.31□□□□□ -0.6
RTC2P38279 SUF10tP(AGG)N 72 nt11.31□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms