Protein–RNA interactions for Protein: P42841

PFS2, Polyadenylation factor subunit 2, yeastyeast

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFS2P42841 NSR1YGR159C 1245 nt18.2■□□□□ 0.5
PFS2P42841 YML009W-BYML009W-B 477 nt17.97■□□□□ 0.47
PFS2P42841 NOP1YDL014W 984 nt17.34■□□□□ 0.37
PFS2P42841 MDJ1YFL016C 1536 nt16.58■□□□□ 0.24
PFS2P42841 YKL036CYKL036C 393 nt15.91■□□□□ 0.14
PFS2P42841 YJL027CYJL027C 417 nt15.26■□□□□ 0.03
PFS2P42841 Q0297Q0297 156 nt15.15■□□□□ 0.02
PFS2P42841 SRX1YKL086W 384 nt15.15■□□□□ 0.02
PFS2P42841 DBP2YNL112W 1641 nt14.48□□□□□ -0.09
PFS2P42841 SCS3YGL126W 1143 nt14.42□□□□□ -0.1
PFS2P42841 YCR051WYCR051W 669 nt14.36□□□□□ -0.11
PFS2P42841 YBR190WYBR190W 312 nt14.23□□□□□ -0.13
PFS2P42841 RTC3YHR087W 336 nt13.91□□□□□ -0.18
PFS2P42841 TRN1tP(UGG)A 72 nt13.9□□□□□ -0.18
PFS2P42841 SUF9tP(UGG)F 72 nt13.9□□□□□ -0.18
PFS2P42841 SUF8tP(UGG)H 72 nt13.9□□□□□ -0.18
PFS2P42841 tP(UGG)LtP(UGG)L 72 nt13.9□□□□□ -0.18
PFS2P42841 SUF7tP(UGG)M 72 nt13.9□□□□□ -0.18
PFS2P42841 tP(UGG)N1tP(UGG)N1 72 nt13.9□□□□□ -0.18
PFS2P42841 tP(UGG)N2tP(UGG)N2 72 nt13.9□□□□□ -0.18
PFS2P42841 tP(UGG)O1tP(UGG)O1 72 nt13.9□□□□□ -0.18
PFS2P42841 SUF11tP(UGG)O2 72 nt13.9□□□□□ -0.18
PFS2P42841 YOL085CYOL085C 342 nt13.78□□□□□ -0.2
PFS2P42841 CCC1YLR220W 969 nt13.76□□□□□ -0.21
PFS2P42841 RPP1BYDL130W 321 nt13.59□□□□□ -0.23
PFS2P42841 PKP1YIL042C 1185 nt13.58□□□□□ -0.24
PFS2P42841 RVS167YDR388W 1449 nt13.55□□□□□ -0.24
PFS2P42841 SCJ1YMR214W 1134 nt13.39□□□□□ -0.27
PFS2P42841 SSA3YBL075C 1950 nt13.36□□□□□ -0.27
PFS2P42841 PUT4YOR348C 1884 nt13.24□□□□□ -0.29
PFS2P42841 tP(UGG)O3tP(UGG)O3 72 nt13.01□□□□□ -0.33
PFS2P42841 PET122YER153C 765 nt12.98□□□□□ -0.33
PFS2P42841 SHR5YOL110W 714 nt12.96□□□□□ -0.33
PFS2P42841 ATS1YAL020C 1002 nt12.88□□□□□ -0.35
PFS2P42841 ARE1YCR048W 1833 nt12.88□□□□□ -0.35
PFS2P42841 URN1YPR152C 1398 nt12.86□□□□□ -0.35
PFS2P42841 SCR1SCR1 522 nt12.84□□□□□ -0.35
PFS2P42841 POA1YBR022W 534 nt12.79□□□□□ -0.36
PFS2P42841 SAH1YER043C 1350 nt12.78□□□□□ -0.36
PFS2P42841 OPI9YLR338W 858 nt12.75□□□□□ -0.37
PFS2P42841 DEP1YAL013W 1218 nt12.74□□□□□ -0.37
PFS2P42841 YHR049C-AYHR049C-A 297 nt12.73□□□□□ -0.37
PFS2P42841 RRN5YLR141W 1092 nt12.62□□□□□ -0.39
PFS2P42841 BSC6YOL137W 1494 nt12.6□□□□□ -0.39
PFS2P42841 RPN10YHR200W 807 nt12.58□□□□□ -0.4
PFS2P42841 YDJ1YNL064C 1230 nt12.58□□□□□ -0.4
PFS2P42841 YNL208WYNL208W 600 nt12.49□□□□□ -0.41
PFS2P42841 BUD23YCR047C 828 nt12.4□□□□□ -0.42
PFS2P42841 PUN1YLR414C 792 nt12.39□□□□□ -0.43
PFS2P42841 GAR1YHR089C 618 nt12.38□□□□□ -0.43
PFS2P42841 YER088W-BYER088W-B 147 nt12.36□□□□□ -0.43
PFS2P42841 RSB1YOR049C 1065 nt12.32□□□□□ -0.44
PFS2P42841 PTC2YER089C 1395 nt12.3□□□□□ -0.44
PFS2P42841 SPT5YML010W 3192 nt12.29□□□□□ -0.44
PFS2P42841 YJR018WYJR018W 363 nt12.23□□□□□ -0.45
PFS2P42841 NAB2YGL122C 1578 nt12.2□□□□□ -0.46
PFS2P42841 SSA4YER103W 1929 nt12.08□□□□□ -0.48
PFS2P42841 FIS1YIL065C 468 nt12□□□□□ -0.49
PFS2P42841 TIR1YER011W 765 nt11.98□□□□□ -0.49
PFS2P42841 DAL1YIR027C 1383 nt11.96□□□□□ -0.49
PFS2P42841 PST2YDR032C 597 nt11.95□□□□□ -0.5
PFS2P42841 YJR120WYJR120W 351 nt11.95□□□□□ -0.5
PFS2P42841 FPR4YLR449W 1179 nt11.93□□□□□ -0.5
PFS2P42841 SSA1YAL005C 1929 nt11.92□□□□□ -0.5
PFS2P42841 RPP2BYDR382W 333 nt11.89□□□□□ -0.51
PFS2P42841 MEP2YNL142W 1500 nt11.87□□□□□ -0.51
PFS2P42841 PHO4YFR034C 939 nt11.86□□□□□ -0.51
PFS2P42841 INM2YDR287W 879 nt11.84□□□□□ -0.51
PFS2P42841 YPS1YLR120C 1710 nt11.77□□□□□ -0.53
PFS2P42841 YBL100CYBL100C 315 nt11.68□□□□□ -0.54
PFS2P42841 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
PFS2P42841 YHR165W-AYHR165W-A 312 nt11.67□□□□□ -0.54
PFS2P42841 SRB2YHR041C 633 nt11.64□□□□□ -0.55
PFS2P42841 BDF1YLR399C 2061 nt11.64□□□□□ -0.55
PFS2P42841 YDR095CYDR095C 411 nt11.63□□□□□ -0.55
PFS2P42841 BDH2YAL061W 1254 nt11.56□□□□□ -0.56
PFS2P42841 FUN26YAL022C 1554 nt11.53□□□□□ -0.56
PFS2P42841 EMI2YDR516C 1503 nt11.51□□□□□ -0.57
PFS2P42841 TAT1YBR069C 1860 nt11.49□□□□□ -0.57
PFS2P42841 SHU1YHL006C 453 nt11.48□□□□□ -0.57
PFS2P42841 YMR090WYMR090W 684 nt11.47□□□□□ -0.57
PFS2P42841 ALF1YNL148C 765 nt11.46□□□□□ -0.57
PFS2P42841 YBR220CYBR220C 1683 nt11.43□□□□□ -0.58
PFS2P42841 YKL097CYKL097C 411 nt11.43□□□□□ -0.58
PFS2P42841 TRM9YML014W 840 nt11.42□□□□□ -0.58
PFS2P42841 YDL221WYDL221W 552 nt11.41□□□□□ -0.58
PFS2P42841 RPP2AYOL039W 321 nt11.41□□□□□ -0.58
PFS2P42841 PTP1YDL230W 1008 nt11.39□□□□□ -0.59
PFS2P42841 WWM1YFL010C 636 nt11.38□□□□□ -0.59
PFS2P42841 CAC2YML102W 1407 nt11.37□□□□□ -0.59
PFS2P42841 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
PFS2P42841 YAL037C-BYAL037C-B 975 nt11.33□□□□□ -0.6
PFS2P42841 LSM3YLR438C-A 270 nt11.33□□□□□ -0.6
PFS2P42841 CCT6YDR188W 1641 nt11.33□□□□□ -0.6
PFS2P42841 SUF2tP(AGG)C 72 nt11.28□□□□□ -0.6
PFS2P42841 SUF10tP(AGG)N 72 nt11.28□□□□□ -0.6
PFS2P42841 SIS1YNL007C 1059 nt11.27□□□□□ -0.61
PFS2P42841 YGR021WYGR021W 873 nt11.25□□□□□ -0.61
PFS2P42841 IRC15YPL017C 1500 nt11.21□□□□□ -0.61
PFS2P42841 YFL021C-AYFL021C-A 855 nt11.21□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms