Protein–RNA interactions for Protein: P33300

SUR1, Mannosyl phosphorylinositol ceramide synthase SUR1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUR1P33300 NSR1YGR159C 1245 nt18.34■□□□□ 0.53
SUR1P33300 YML009W-BYML009W-B 477 nt18.13■□□□□ 0.49
SUR1P33300 NOP1YDL014W 984 nt17.5■□□□□ 0.39
SUR1P33300 MDJ1YFL016C 1536 nt16.64■□□□□ 0.25
SUR1P33300 YKL036CYKL036C 393 nt15.76■□□□□ 0.11
SUR1P33300 YJL027CYJL027C 417 nt15.36■□□□□ 0.05
SUR1P33300 SRX1YKL086W 384 nt15.24■□□□□ 0.03
SUR1P33300 Q0297Q0297 156 nt15.13■□□□□ 0.01
SUR1P33300 DBP2YNL112W 1641 nt14.52□□□□□ -0.09
SUR1P33300 YCR051WYCR051W 669 nt14.47□□□□□ -0.09
SUR1P33300 YBR190WYBR190W 312 nt14.3□□□□□ -0.12
SUR1P33300 SCS3YGL126W 1143 nt14.24□□□□□ -0.13
SUR1P33300 RTC3YHR087W 336 nt14.02□□□□□ -0.17
SUR1P33300 TRN1tP(UGG)A 72 nt13.99□□□□□ -0.17
SUR1P33300 SUF9tP(UGG)F 72 nt13.99□□□□□ -0.17
SUR1P33300 SUF8tP(UGG)H 72 nt13.99□□□□□ -0.17
SUR1P33300 tP(UGG)LtP(UGG)L 72 nt13.99□□□□□ -0.17
SUR1P33300 SUF7tP(UGG)M 72 nt13.99□□□□□ -0.17
SUR1P33300 tP(UGG)N1tP(UGG)N1 72 nt13.99□□□□□ -0.17
SUR1P33300 tP(UGG)N2tP(UGG)N2 72 nt13.99□□□□□ -0.17
SUR1P33300 tP(UGG)O1tP(UGG)O1 72 nt13.99□□□□□ -0.17
SUR1P33300 SUF11tP(UGG)O2 72 nt13.99□□□□□ -0.17
SUR1P33300 CCC1YLR220W 969 nt13.91□□□□□ -0.18
SUR1P33300 RVS167YDR388W 1449 nt13.66□□□□□ -0.22
SUR1P33300 YOL085CYOL085C 342 nt13.64□□□□□ -0.23
SUR1P33300 RPP1BYDL130W 321 nt13.6□□□□□ -0.23
SUR1P33300 PKP1YIL042C 1185 nt13.49□□□□□ -0.25
SUR1P33300 SCJ1YMR214W 1134 nt13.43□□□□□ -0.26
SUR1P33300 SSA3YBL075C 1950 nt13.27□□□□□ -0.29
SUR1P33300 PUT4YOR348C 1884 nt13.24□□□□□ -0.29
SUR1P33300 tP(UGG)O3tP(UGG)O3 72 nt13.13□□□□□ -0.31
SUR1P33300 SHR5YOL110W 714 nt13.06□□□□□ -0.32
SUR1P33300 PET122YER153C 765 nt13.02□□□□□ -0.33
SUR1P33300 URN1YPR152C 1398 nt12.94□□□□□ -0.34
SUR1P33300 ARE1YCR048W 1833 nt12.88□□□□□ -0.35
SUR1P33300 POA1YBR022W 534 nt12.84□□□□□ -0.35
SUR1P33300 SAH1YER043C 1350 nt12.83□□□□□ -0.36
SUR1P33300 DEP1YAL013W 1218 nt12.83□□□□□ -0.36
SUR1P33300 SCR1SCR1 522 nt12.83□□□□□ -0.36
SUR1P33300 OPI9YLR338W 858 nt12.81□□□□□ -0.36
SUR1P33300 YHR049C-AYHR049C-A 297 nt12.76□□□□□ -0.37
SUR1P33300 ATS1YAL020C 1002 nt12.71□□□□□ -0.37
SUR1P33300 RPN10YHR200W 807 nt12.7□□□□□ -0.38
SUR1P33300 YDJ1YNL064C 1230 nt12.7□□□□□ -0.38
SUR1P33300 BSC6YOL137W 1494 nt12.62□□□□□ -0.39
SUR1P33300 RRN5YLR141W 1092 nt12.62□□□□□ -0.39
SUR1P33300 YNL208WYNL208W 600 nt12.59□□□□□ -0.39
SUR1P33300 GAR1YHR089C 618 nt12.5□□□□□ -0.41
SUR1P33300 BUD23YCR047C 828 nt12.46□□□□□ -0.41
SUR1P33300 PUN1YLR414C 792 nt12.46□□□□□ -0.41
SUR1P33300 PTC2YER089C 1395 nt12.37□□□□□ -0.43
SUR1P33300 YER088W-BYER088W-B 147 nt12.36□□□□□ -0.43
SUR1P33300 Q0182Q0182 405 nt12.32□□□□□ -0.44
SUR1P33300 YJR018WYJR018W 363 nt12.32□□□□□ -0.44
SUR1P33300 RSB1YOR049C 1065 nt12.27□□□□□ -0.45
SUR1P33300 NAB2YGL122C 1578 nt12.26□□□□□ -0.45
SUR1P33300 SPT5YML010W 3192 nt12.21□□□□□ -0.46
SUR1P33300 TIR1YER011W 765 nt12.09□□□□□ -0.47
SUR1P33300 FPR4YLR449W 1179 nt12.04□□□□□ -0.48
SUR1P33300 SSA4YER103W 1929 nt12.02□□□□□ -0.49
SUR1P33300 DAL1YIR027C 1383 nt12.02□□□□□ -0.49
SUR1P33300 RPP2BYDR382W 333 nt12.01□□□□□ -0.49
SUR1P33300 FIS1YIL065C 468 nt12.01□□□□□ -0.49
SUR1P33300 SSA1YAL005C 1929 nt11.99□□□□□ -0.49
SUR1P33300 YJR120WYJR120W 351 nt11.97□□□□□ -0.49
SUR1P33300 INM2YDR287W 879 nt11.95□□□□□ -0.5
SUR1P33300 PHO4YFR034C 939 nt11.9□□□□□ -0.5
SUR1P33300 MEP2YNL142W 1500 nt11.88□□□□□ -0.51
SUR1P33300 YPS1YLR120C 1710 nt11.79□□□□□ -0.52
SUR1P33300 PST2YDR032C 597 nt11.78□□□□□ -0.52
SUR1P33300 YBL100CYBL100C 315 nt11.76□□□□□ -0.53
SUR1P33300 YHR165W-AYHR165W-A 312 nt11.74□□□□□ -0.53
SUR1P33300 SRB2YHR041C 633 nt11.68□□□□□ -0.54
SUR1P33300 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
SUR1P33300 BDH2YAL061W 1254 nt11.66□□□□□ -0.54
SUR1P33300 YDR095CYDR095C 411 nt11.65□□□□□ -0.54
SUR1P33300 FUN26YAL022C 1554 nt11.6□□□□□ -0.55
SUR1P33300 ALF1YNL148C 765 nt11.56□□□□□ -0.56
SUR1P33300 BDF1YLR399C 2061 nt11.55□□□□□ -0.56
SUR1P33300 YMR090WYMR090W 684 nt11.54□□□□□ -0.56
SUR1P33300 TRM9YML014W 840 nt11.53□□□□□ -0.56
SUR1P33300 EMI2YDR516C 1503 nt11.53□□□□□ -0.56
SUR1P33300 MOT3YMR070W 1473 nt11.52□□□□□ -0.56
SUR1P33300 WWM1YFL010C 636 nt11.48□□□□□ -0.57
SUR1P33300 RPP2AYOL039W 321 nt11.46□□□□□ -0.57
SUR1P33300 LSM3YLR438C-A 270 nt11.44□□□□□ -0.58
SUR1P33300 NVJ2YPR091C 2313 nt11.43□□□□□ -0.58
SUR1P33300 YDL221WYDL221W 552 nt11.42□□□□□ -0.58
SUR1P33300 YBR220CYBR220C 1683 nt11.42□□□□□ -0.58
SUR1P33300 FPS1YLL043W 2010 nt11.42□□□□□ -0.58
SUR1P33300 TAT1YBR069C 1860 nt11.4□□□□□ -0.58
SUR1P33300 CCT6YDR188W 1641 nt11.4□□□□□ -0.58
SUR1P33300 PTP1YDL230W 1008 nt11.4□□□□□ -0.58
SUR1P33300 CAC2YML102W 1407 nt11.39□□□□□ -0.59
SUR1P33300 SUF2tP(AGG)C 72 nt11.37□□□□□ -0.59
SUR1P33300 SUF10tP(AGG)N 72 nt11.37□□□□□ -0.59
SUR1P33300 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
SUR1P33300 YGR021WYGR021W 873 nt11.33□□□□□ -0.6
SUR1P33300 PAC11YDR488C 1602 nt11.33□□□□□ -0.6
SUR1P33300 YFL021C-AYFL021C-A 855 nt11.32□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms