RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MDH1P17505 334 aaKnown RBP RIP-Chip data0.89□□□□□ -2.27not detected
PRP16YKR086W ISY1P21374 235 aaPredicted RBP0.89□□□□□ -2.27
PRP16YKR086W OSM1P21375 501 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W HSP104P31539 908 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W PDB1P32473 366 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W LTV1P34078 463 aa0.89□□□□□ -2.27
PRP16YKR086W ECM15P35195 104 aa0.89□□□□□ -2.27
PRP16YKR086W FRE2P36033 711 aa0.89□□□□□ -2.27
PRP16YKR086W MSG5P38590 489 aa0.89□□□□□ -2.27
PRP16YKR086W FAD1P38913 306 aa0.89□□□□□ -2.27
PRP16YKR086W YER184CP39961 794 aa0.89□□□□□ -2.27
PRP16YKR086W ATM1P40416 690 aa0.89□□□□□ -2.27
PRP16YKR086W GCD10P41814 478 aa0.89□□□□□ -2.27
PRP16YKR086W RLI1Q03195 608 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W TSA2Q04120 196 aa0.89□□□□□ -2.27
PRP16YKR086W PEX10Q05568 337 aa0.89□□□□□ -2.27
PRP16YKR086W YOR365CQ08844 703 aa0.89□□□□□ -2.27
PRP16YKR086W YOR387CQ08910 206 aa0.89□□□□□ -2.27
PRP16YKR086W SPE4Q12455 300 aa0.89□□□□□ -2.27
PRP16YKR086W YCL021W-AQ96VH3 125 aa0.89□□□□□ -2.27
PRP16YKR086W RPL31BP0C2H9 113 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W RPL19AP0CX82 189 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W RPL19BP0CX83 189 aaPredicted RBP0.89□□□□□ -2.27
PRP16YKR086W REV1P12689 985 aa0.89□□□□□ -2.27
PRP16YKR086W SLY1P22213 666 aa0.89□□□□□ -2.27
PRP16YKR086W CCT6P39079 546 aa0.89□□□□□ -2.27
PRP16YKR086W BIR1P47134 954 aa0.89□□□□□ -2.27
PRP16YKR086W TCB2P48231 1178 aa0.89□□□□□ -2.27
PRP16YKR086W MRX6P48564 524 aa0.89□□□□□ -2.27
PRP16YKR086W BRO1P48582 844 aa0.89□□□□□ -2.27
PRP16YKR086W ARP5P53946 755 aa0.89□□□□□ -2.27
PRP16YKR086W YNL050CP53952 270 aa0.89□□□□□ -2.27
PRP16YKR086W SAM50P53969 484 aa0.89□□□□□ -2.27
PRP16YKR086W EFM6P53970 246 aa0.89□□□□□ -2.27
PRP16YKR086W YEH1Q07804 573 aa0.89□□□□□ -2.27
PRP16YKR086W LDS2Q08218 356 aa0.89□□□□□ -2.27
PRP16YKR086W TMS1Q12116 473 aa0.89□□□□□ -2.27
PRP16YKR086W CAR2P07991 424 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W CBS2P14905 389 aa0.89□□□□□ -2.27
PRP16YKR086W MET8P15807 274 aa0.89□□□□□ -2.27
PRP16YKR086W SEC14P24280 304 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W YCR100CP25606 316 aa0.89□□□□□ -2.27
PRP16YKR086W PHO91P27514 894 aa0.89□□□□□ -2.27
PRP16YKR086W NDI1P32340 513 aa0.89□□□□□ -2.27
PRP16YKR086W NIP100P33420 868 aa0.89□□□□□ -2.27
PRP16YKR086W RIB5P38145 238 aa0.89□□□□□ -2.27
PRP16YKR086W MTC4P38335 694 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W TRM5P38793 499 aa0.89□□□□□ -2.27
PRP16YKR086W APE4P38821 490 aa0.89□□□□□ -2.27
PRP16YKR086W HAT2P39984 401 aa0.89□□□□□ -2.27
PRP16YKR086W YJR154WP47181 346 aa0.89□□□□□ -2.27
PRP16YKR086W YGR168CP53293 376 aa0.89□□□□□ -2.27
PRP16YKR086W NCS2P53923 493 aaPredicted RBP0.89□□□□□ -2.27
PRP16YKR086W AQR1P53943 586 aa0.89□□□□□ -2.27
PRP16YKR086W TAP42Q04372 366 aa0.89□□□□□ -2.27
PRP16YKR086W SOV1Q04748 898 aa0.89□□□□□ -2.27
PRP16YKR086W SNX3Q08826 162 aaKnown RBP0.89□□□□□ -2.27
PRP16YKR086W ATG29Q12092 213 aa0.89□□□□□ -2.27
PRP16YKR086W ERV2Q12284 196 aa0.89□□□□□ -2.27
PRP16YKR086W STT4P37297 1900 aa0.89□□□□□ -2.27
PRP16YKR086W IKI3Q06706 1349 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W SEM1O94742 89 aa0.88□□□□□ -2.27
PRP16YKR086W ILV1P00927 576 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W TPK3P05986 398 aa0.88□□□□□ -2.27
PRP16YKR086W HIP1P06775 603 aa0.88□□□□□ -2.27
PRP16YKR086W ATG15P25641 520 aa0.88□□□□□ -2.27
PRP16YKR086W FUN19P28003 413 aaPredicted RBP0.88□□□□□ -2.27
PRP16YKR086W SPC110P32380 944 aa0.88□□□□□ -2.27
PRP16YKR086W MUD1P32605 298 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W MSN4P33749 630 aa0.88□□□□□ -2.27
PRP16YKR086W YBL059WP34224 193 aa0.88□□□□□ -2.27
PRP16YKR086W SWH1P35845 1188 aa0.88□□□□□ -2.27
PRP16YKR086W VID24P38263 362 aa0.88□□□□□ -2.27
PRP16YKR086W SSH1P38353 490 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W YNG2P38806 282 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W KEL1P38853 1164 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W PRE5P40302 234 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W RRT5P43607 289 aa0.88□□□□□ -2.27
PRP16YKR086W RPS0BP46654 252 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W URB2P47108 1174 aa0.88□□□□□ -2.27
PRP16YKR086W ALT2P52892 507 aa0.88□□□□□ -2.27
PRP16YKR086W YGR117CP53270 476 aa0.88□□□□□ -2.27
PRP16YKR086W SVL3Q03088 825 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W YDR387CQ04162 555 aa0.88□□□□□ -2.27
PRP16YKR086W YLR297WQ05899 129 aa0.88□□□□□ -2.27
PRP16YKR086W SMF3Q12078 473 aaPredicted RBP0.88□□□□□ -2.27
PRP16YKR086W MED2Q12124 431 aa0.88□□□□□ -2.27
PRP16YKR086W HIF1Q12373 385 aa0.88□□□□□ -2.27
PRP16YKR086W TFB5Q3E7C1 72 aaPredicted RBP0.88□□□□□ -2.27
PRP16YKR086W BRR1Q99177 341 aaPredicted RBP0.88□□□□□ -2.27
PRP16YKR086W YPT6Q99260 215 aa0.88□□□□□ -2.27
PRP16YKR086W LAA1P39526 2014 aa0.88□□□□□ -2.27
PRP16YKR086W RHO2P06781 192 aa0.88□□□□□ -2.27
PRP16YKR086W CTA1P15202 515 aa0.88□□□□□ -2.27
PRP16YKR086W INO2P26798 304 aa0.88□□□□□ -2.27
PRP16YKR086W CYS4P32582 507 aaKnown RBP0.88□□□□□ -2.27
PRP16YKR086W PDC2P32896 925 aa0.88□□□□□ -2.27
PRP16YKR086W NUP133P36161 1157 aa0.88□□□□□ -2.27
PRP16YKR086W RXT2P38255 430 aa0.88□□□□□ -2.27
PRP16YKR086W VAC7P53950 1165 aa0.88□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms