Protein–RNA interactions for Protein: Q08218

LDS2, Outer spore wall protein LDS2, yeastyeast

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDS2Q08218 NSR1YGR159C 1245 nt16.01■□□□□ 0.15
LDS2Q08218 YML009W-BYML009W-B 477 nt15.88■□□□□ 0.13
LDS2Q08218 NOP1YDL014W 984 nt15.44■□□□□ 0.06
LDS2Q08218 MDJ1YFL016C 1536 nt14.63□□□□□ -0.07
LDS2Q08218 YKL036CYKL036C 393 nt14.04□□□□□ -0.16
LDS2Q08218 YJL027CYJL027C 417 nt13.46□□□□□ -0.25
LDS2Q08218 SRX1YKL086W 384 nt13.42□□□□□ -0.26
LDS2Q08218 Q0297Q0297 156 nt13.39□□□□□ -0.27
LDS2Q08218 DBP2YNL112W 1641 nt12.79□□□□□ -0.36
LDS2Q08218 YCR051WYCR051W 669 nt12.73□□□□□ -0.37
LDS2Q08218 SCS3YGL126W 1143 nt12.64□□□□□ -0.39
LDS2Q08218 YBR190WYBR190W 312 nt12.63□□□□□ -0.39
LDS2Q08218 SSA3YBL075C 1950 nt12.3□□□□□ -0.44
LDS2Q08218 RTC3YHR087W 336 nt12.29□□□□□ -0.44
LDS2Q08218 TRN1tP(UGG)A 72 nt12.23□□□□□ -0.45
LDS2Q08218 SUF9tP(UGG)F 72 nt12.23□□□□□ -0.45
LDS2Q08218 SUF8tP(UGG)H 72 nt12.23□□□□□ -0.45
LDS2Q08218 tP(UGG)LtP(UGG)L 72 nt12.23□□□□□ -0.45
LDS2Q08218 SUF7tP(UGG)M 72 nt12.23□□□□□ -0.45
LDS2Q08218 tP(UGG)N1tP(UGG)N1 72 nt12.23□□□□□ -0.45
LDS2Q08218 tP(UGG)N2tP(UGG)N2 72 nt12.23□□□□□ -0.45
LDS2Q08218 tP(UGG)O1tP(UGG)O1 72 nt12.23□□□□□ -0.45
LDS2Q08218 SUF11tP(UGG)O2 72 nt12.23□□□□□ -0.45
LDS2Q08218 YOL085CYOL085C 342 nt12.12□□□□□ -0.47
LDS2Q08218 CCC1YLR220W 969 nt12.08□□□□□ -0.48
LDS2Q08218 RPP1BYDL130W 321 nt12.02□□□□□ -0.49
LDS2Q08218 PKP1YIL042C 1185 nt11.92□□□□□ -0.5
LDS2Q08218 RVS167YDR388W 1449 nt11.87□□□□□ -0.51
LDS2Q08218 PUT4YOR348C 1884 nt11.87□□□□□ -0.51
LDS2Q08218 SCJ1YMR214W 1134 nt11.72□□□□□ -0.53
LDS2Q08218 tP(UGG)O3tP(UGG)O3 72 nt11.5□□□□□ -0.57
LDS2Q08218 ARE1YCR048W 1833 nt11.5□□□□□ -0.57
LDS2Q08218 PET122YER153C 765 nt11.47□□□□□ -0.57
LDS2Q08218 POA1YBR022W 534 nt11.43□□□□□ -0.58
LDS2Q08218 SCR1SCR1 522 nt11.39□□□□□ -0.59
LDS2Q08218 SHR5YOL110W 714 nt11.37□□□□□ -0.59
LDS2Q08218 SAH1YER043C 1350 nt11.34□□□□□ -0.59
LDS2Q08218 URN1YPR152C 1398 nt11.34□□□□□ -0.59
LDS2Q08218 YHR049C-AYHR049C-A 297 nt11.3□□□□□ -0.6
LDS2Q08218 OPI9YLR338W 858 nt11.29□□□□□ -0.6
LDS2Q08218 BSC6YOL137W 1494 nt11.27□□□□□ -0.6
LDS2Q08218 ATS1YAL020C 1002 nt11.25□□□□□ -0.61
LDS2Q08218 SPT5YML010W 3192 nt11.22□□□□□ -0.61
LDS2Q08218 DEP1YAL013W 1218 nt11.18□□□□□ -0.62
LDS2Q08218 YDJ1YNL064C 1230 nt11.17□□□□□ -0.62
LDS2Q08218 RRN5YLR141W 1092 nt11.11□□□□□ -0.63
LDS2Q08218 Q0182Q0182 405 nt11.1□□□□□ -0.63
LDS2Q08218 RPN10YHR200W 807 nt11.05□□□□□ -0.64
LDS2Q08218 BUD23YCR047C 828 nt11□□□□□ -0.65
LDS2Q08218 SSA4YER103W 1929 nt10.99□□□□□ -0.65
LDS2Q08218 YNL208WYNL208W 600 nt10.97□□□□□ -0.65
LDS2Q08218 PUN1YLR414C 792 nt10.95□□□□□ -0.66
LDS2Q08218 GAR1YHR089C 618 nt10.91□□□□□ -0.66
LDS2Q08218 PTC2YER089C 1395 nt10.9□□□□□ -0.66
LDS2Q08218 YER088W-BYER088W-B 147 nt10.9□□□□□ -0.66
LDS2Q08218 RSB1YOR049C 1065 nt10.88□□□□□ -0.67
LDS2Q08218 NAB2YGL122C 1578 nt10.84□□□□□ -0.67
LDS2Q08218 YJR018WYJR018W 363 nt10.79□□□□□ -0.68
LDS2Q08218 BDF1YLR399C 2061 nt10.65□□□□□ -0.7
LDS2Q08218 MEP2YNL142W 1500 nt10.65□□□□□ -0.7
LDS2Q08218 FIS1YIL065C 468 nt10.62□□□□□ -0.71
LDS2Q08218 DAL1YIR027C 1383 nt10.6□□□□□ -0.71
LDS2Q08218 TIR1YER011W 765 nt10.56□□□□□ -0.72
LDS2Q08218 YJR120WYJR120W 351 nt10.53□□□□□ -0.72
LDS2Q08218 FPR4YLR449W 1179 nt10.52□□□□□ -0.73
LDS2Q08218 PHO4YFR034C 939 nt10.49□□□□□ -0.73
LDS2Q08218 TAT1YBR069C 1860 nt10.49□□□□□ -0.73
LDS2Q08218 YPS1YLR120C 1710 nt10.48□□□□□ -0.73
LDS2Q08218 INM2YDR287W 879 nt10.48□□□□□ -0.73
LDS2Q08218 MOT3YMR070W 1473 nt10.48□□□□□ -0.73
LDS2Q08218 DCW1YKL046C 1350 nt10.46□□□□□ -0.74
LDS2Q08218 SSA1YAL005C 1929 nt10.45□□□□□ -0.74
LDS2Q08218 NVJ2YPR091C 2313 nt10.43□□□□□ -0.74
LDS2Q08218 PST2YDR032C 597 nt10.43□□□□□ -0.74
LDS2Q08218 RPP2BYDR382W 333 nt10.43□□□□□ -0.74
LDS2Q08218 YHR165W-AYHR165W-A 312 nt10.36□□□□□ -0.75
LDS2Q08218 PAC11YDR488C 1602 nt10.36□□□□□ -0.75
LDS2Q08218 YDR095CYDR095C 411 nt10.32□□□□□ -0.76
LDS2Q08218 FPS1YLL043W 2010 nt10.32□□□□□ -0.76
LDS2Q08218 EMI2YDR516C 1503 nt10.31□□□□□ -0.76
LDS2Q08218 YBR220CYBR220C 1683 nt10.31□□□□□ -0.76
LDS2Q08218 YBL100CYBL100C 315 nt10.28□□□□□ -0.76
LDS2Q08218 YMR090WYMR090W 684 nt10.27□□□□□ -0.77
LDS2Q08218 YDL221WYDL221W 552 nt10.2□□□□□ -0.78
LDS2Q08218 SDH1YKL148C 1923 nt10.18□□□□□ -0.78
LDS2Q08218 SRB2YHR041C 633 nt10.18□□□□□ -0.78
LDS2Q08218 CAC2YML102W 1407 nt10.16□□□□□ -0.78
LDS2Q08218 PTP1YDL230W 1008 nt10.16□□□□□ -0.78
LDS2Q08218 BDH2YAL061W 1254 nt10.16□□□□□ -0.78
LDS2Q08218 FUN26YAL022C 1554 nt10.15□□□□□ -0.78
LDS2Q08218 RPP2AYOL039W 321 nt10.13□□□□□ -0.79
LDS2Q08218 ALF1YNL148C 765 nt10.09□□□□□ -0.79
LDS2Q08218 TRM9YML014W 840 nt10.05□□□□□ -0.8
LDS2Q08218 SHU1YHL006C 453 nt10.04□□□□□ -0.8
LDS2Q08218 SCC4YER147C 1875 nt10.04□□□□□ -0.8
LDS2Q08218 PCH2YBR186W 1695 nt10.03□□□□□ -0.8
LDS2Q08218 WWM1YFL010C 636 nt10.02□□□□□ -0.81
LDS2Q08218 YGR021WYGR021W 873 nt10.02□□□□□ -0.81
LDS2Q08218 IRC15YPL017C 1500 nt10.02□□□□□ -0.81
LDS2Q08218 GUT2YIL155C 1950 nt10□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms