Protein–RNA interactions for Protein: P05986

TPK3, cAMP-dependent protein kinase type 3, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPK3P05986 NSR1YGR159C 1245 nt18.69■□□□□ 0.58
TPK3P05986 YML009W-BYML009W-B 477 nt18.43■□□□□ 0.54
TPK3P05986 NOP1YDL014W 984 nt17.73■□□□□ 0.43
TPK3P05986 MDJ1YFL016C 1536 nt17.16■□□□□ 0.34
TPK3P05986 YKL036CYKL036C 393 nt15.97■□□□□ 0.15
TPK3P05986 YJL027CYJL027C 417 nt15.77■□□□□ 0.12
TPK3P05986 SRX1YKL086W 384 nt15.49■□□□□ 0.07
TPK3P05986 Q0297Q0297 156 nt15.38■□□□□ 0.05
TPK3P05986 DBP2YNL112W 1641 nt14.94□□□□□ -0.02
TPK3P05986 YBR190WYBR190W 312 nt14.76□□□□□ -0.05
TPK3P05986 YCR051WYCR051W 669 nt14.66□□□□□ -0.06
TPK3P05986 RTC3YHR087W 336 nt14.43□□□□□ -0.1
TPK3P05986 SCS3YGL126W 1143 nt14.32□□□□□ -0.12
TPK3P05986 SSA3YBL075C 1950 nt14.31□□□□□ -0.12
TPK3P05986 TRN1tP(UGG)A 72 nt14.27□□□□□ -0.13
TPK3P05986 SUF9tP(UGG)F 72 nt14.27□□□□□ -0.13
TPK3P05986 SUF8tP(UGG)H 72 nt14.27□□□□□ -0.13
TPK3P05986 tP(UGG)LtP(UGG)L 72 nt14.27□□□□□ -0.13
TPK3P05986 SUF7tP(UGG)M 72 nt14.27□□□□□ -0.13
TPK3P05986 tP(UGG)N1tP(UGG)N1 72 nt14.27□□□□□ -0.13
TPK3P05986 tP(UGG)N2tP(UGG)N2 72 nt14.27□□□□□ -0.13
TPK3P05986 tP(UGG)O1tP(UGG)O1 72 nt14.27□□□□□ -0.13
TPK3P05986 SUF11tP(UGG)O2 72 nt14.27□□□□□ -0.13
TPK3P05986 CCC1YLR220W 969 nt14.11□□□□□ -0.15
TPK3P05986 RVS167YDR388W 1449 nt13.92□□□□□ -0.18
TPK3P05986 YOL085CYOL085C 342 nt13.84□□□□□ -0.19
TPK3P05986 PUT4YOR348C 1884 nt13.84□□□□□ -0.19
TPK3P05986 RPP1BYDL130W 321 nt13.81□□□□□ -0.2
TPK3P05986 SCJ1YMR214W 1134 nt13.74□□□□□ -0.21
TPK3P05986 PKP1YIL042C 1185 nt13.68□□□□□ -0.22
TPK3P05986 ARE1YCR048W 1833 nt13.42□□□□□ -0.26
TPK3P05986 POA1YBR022W 534 nt13.39□□□□□ -0.27
TPK3P05986 tP(UGG)O3tP(UGG)O3 72 nt13.35□□□□□ -0.27
TPK3P05986 SHR5YOL110W 714 nt13.3□□□□□ -0.28
TPK3P05986 URN1YPR152C 1398 nt13.29□□□□□ -0.28
TPK3P05986 SAH1YER043C 1350 nt13.28□□□□□ -0.28
TPK3P05986 YHR049C-AYHR049C-A 297 nt13.26□□□□□ -0.29
TPK3P05986 PET122YER153C 765 nt13.25□□□□□ -0.29
TPK3P05986 BSC6YOL137W 1494 nt13.2□□□□□ -0.3
TPK3P05986 OPI9YLR338W 858 nt13.19□□□□□ -0.3
TPK3P05986 DEP1YAL013W 1218 nt13.14□□□□□ -0.31
TPK3P05986 SCR1SCR1 522 nt12.98□□□□□ -0.33
TPK3P05986 SPT5YML010W 3192 nt12.97□□□□□ -0.33
TPK3P05986 RPN10YHR200W 807 nt12.94□□□□□ -0.34
TPK3P05986 BUD23YCR047C 828 nt12.93□□□□□ -0.34
TPK3P05986 YDJ1YNL064C 1230 nt12.92□□□□□ -0.34
TPK3P05986 YNL208WYNL208W 600 nt12.85□□□□□ -0.35
TPK3P05986 SSA4YER103W 1929 nt12.81□□□□□ -0.36
TPK3P05986 RRN5YLR141W 1092 nt12.8□□□□□ -0.36
TPK3P05986 PUN1YLR414C 792 nt12.8□□□□□ -0.36
TPK3P05986 PTC2YER089C 1395 nt12.77□□□□□ -0.37
TPK3P05986 GAR1YHR089C 618 nt12.69□□□□□ -0.38
TPK3P05986 ATS1YAL020C 1002 nt12.67□□□□□ -0.38
TPK3P05986 NAB2YGL122C 1578 nt12.66□□□□□ -0.38
TPK3P05986 YJR018WYJR018W 363 nt12.64□□□□□ -0.39
TPK3P05986 YER088W-BYER088W-B 147 nt12.55□□□□□ -0.4
TPK3P05986 MEP2YNL142W 1500 nt12.43□□□□□ -0.42
TPK3P05986 FIS1YIL065C 468 nt12.43□□□□□ -0.42
TPK3P05986 RSB1YOR049C 1065 nt12.43□□□□□ -0.42
TPK3P05986 FPR4YLR449W 1179 nt12.39□□□□□ -0.43
TPK3P05986 DAL1YIR027C 1383 nt12.39□□□□□ -0.43
TPK3P05986 BDF1YLR399C 2061 nt12.36□□□□□ -0.43
TPK3P05986 YJR120WYJR120W 351 nt12.31□□□□□ -0.44
TPK3P05986 TIR1YER011W 765 nt12.3□□□□□ -0.44
TPK3P05986 PHO4YFR034C 939 nt12.28□□□□□ -0.44
TPK3P05986 INM2YDR287W 879 nt12.25□□□□□ -0.45
TPK3P05986 DCW1YKL046C 1350 nt12.24□□□□□ -0.45
TPK3P05986 YPS1YLR120C 1710 nt12.23□□□□□ -0.45
TPK3P05986 RPP2BYDR382W 333 nt12.23□□□□□ -0.45
TPK3P05986 SSA1YAL005C 1929 nt12.23□□□□□ -0.45
TPK3P05986 TAT1YBR069C 1860 nt12.18□□□□□ -0.46
TPK3P05986 YHR165W-AYHR165W-A 312 nt12.16□□□□□ -0.46
TPK3P05986 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
TPK3P05986 YBL100CYBL100C 315 nt12.06□□□□□ -0.48
TPK3P05986 EMI2YDR516C 1503 nt12.06□□□□□ -0.48
TPK3P05986 YMR090WYMR090W 684 nt12.02□□□□□ -0.49
TPK3P05986 YBR220CYBR220C 1683 nt12.02□□□□□ -0.49
TPK3P05986 SRB2YHR041C 633 nt11.95□□□□□ -0.5
TPK3P05986 YDL221WYDL221W 552 nt11.91□□□□□ -0.5
TPK3P05986 FUN26YAL022C 1554 nt11.89□□□□□ -0.51
TPK3P05986 CAC2YML102W 1407 nt11.88□□□□□ -0.51
TPK3P05986 BDH2YAL061W 1254 nt11.88□□□□□ -0.51
TPK3P05986 SDH1YKL148C 1923 nt11.88□□□□□ -0.51
TPK3P05986 PTP1YDL230W 1008 nt11.85□□□□□ -0.51
TPK3P05986 ALF1YNL148C 765 nt11.85□□□□□ -0.51
TPK3P05986 RPP2AYOL039W 321 nt11.85□□□□□ -0.51
TPK3P05986 PST2YDR032C 597 nt11.8□□□□□ -0.52
TPK3P05986 PAC11YDR488C 1602 nt11.78□□□□□ -0.52
TPK3P05986 TRM9YML014W 840 nt11.76□□□□□ -0.53
TPK3P05986 SCC4YER147C 1875 nt11.73□□□□□ -0.53
TPK3P05986 IRC15YPL017C 1500 nt11.7□□□□□ -0.54
TPK3P05986 PCH2YBR186W 1695 nt11.69□□□□□ -0.54
TPK3P05986 WWM1YFL010C 636 nt11.68□□□□□ -0.54
TPK3P05986 SIS1YNL007C 1059 nt11.66□□□□□ -0.54
TPK3P05986 CCT6YDR188W 1641 nt11.66□□□□□ -0.54
TPK3P05986 SEC11YIR022W 504 nt11.65□□□□□ -0.54
TPK3P05986 GUT2YIL155C 1950 nt11.64□□□□□ -0.55
TPK3P05986 GIS3YLR094C 1509 nt11.64□□□□□ -0.55
TPK3P05986 LSM3YLR438C-A 270 nt11.62□□□□□ -0.55
TPK3P05986 SUF2tP(AGG)C 72 nt11.6□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms