Protein–RNA interactions for Protein: P38590

MSG5, Tyrosine-protein phosphatase MSG5, yeastyeast

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSG5P38590 NSR1YGR159C 1245 nt21.12■□□□□ 0.97
MSG5P38590 YML009W-BYML009W-B 477 nt21.05■□□□□ 0.96
MSG5P38590 NOP1YDL014W 984 nt20.3■□□□□ 0.84
MSG5P38590 MDJ1YFL016C 1536 nt19.08■□□□□ 0.64
MSG5P38590 YKL036CYKL036C 393 nt18.5■□□□□ 0.55
MSG5P38590 SRX1YKL086W 384 nt17.76■□□□□ 0.43
MSG5P38590 Q0297Q0297 156 nt17.71■□□□□ 0.43
MSG5P38590 YJL027CYJL027C 417 nt17.53■□□□□ 0.4
MSG5P38590 YCR051WYCR051W 669 nt16.84■□□□□ 0.29
MSG5P38590 DBP2YNL112W 1641 nt16.78■□□□□ 0.28
MSG5P38590 SCS3YGL126W 1143 nt16.73■□□□□ 0.27
MSG5P38590 YBR190WYBR190W 312 nt16.28■□□□□ 0.2
MSG5P38590 TRN1tP(UGG)A 72 nt16.25■□□□□ 0.19
MSG5P38590 SUF9tP(UGG)F 72 nt16.25■□□□□ 0.19
MSG5P38590 SUF8tP(UGG)H 72 nt16.25■□□□□ 0.19
MSG5P38590 tP(UGG)LtP(UGG)L 72 nt16.25■□□□□ 0.19
MSG5P38590 SUF7tP(UGG)M 72 nt16.25■□□□□ 0.19
MSG5P38590 tP(UGG)N1tP(UGG)N1 72 nt16.25■□□□□ 0.19
MSG5P38590 tP(UGG)N2tP(UGG)N2 72 nt16.25■□□□□ 0.19
MSG5P38590 tP(UGG)O1tP(UGG)O1 72 nt16.25■□□□□ 0.19
MSG5P38590 SUF11tP(UGG)O2 72 nt16.25■□□□□ 0.19
MSG5P38590 CCC1YLR220W 969 nt16.07■□□□□ 0.16
MSG5P38590 YOL085CYOL085C 342 nt16.06■□□□□ 0.16
MSG5P38590 RTC3YHR087W 336 nt15.91■□□□□ 0.14
MSG5P38590 RPP1BYDL130W 321 nt15.9■□□□□ 0.14
MSG5P38590 PKP1YIL042C 1185 nt15.87■□□□□ 0.13
MSG5P38590 RVS167YDR388W 1449 nt15.64■□□□□ 0.09
MSG5P38590 SCJ1YMR214W 1134 nt15.59■□□□□ 0.09
MSG5P38590 tP(UGG)O3tP(UGG)O3 72 nt15.27■□□□□ 0.04
MSG5P38590 PET122YER153C 765 nt15.25■□□□□ 0.03
MSG5P38590 SHR5YOL110W 714 nt15.05■□□□□ -0
MSG5P38590 PUT4YOR348C 1884 nt15.04■□□□□ -0
MSG5P38590 SCR1SCR1 522 nt14.95□□□□□ -0.02
MSG5P38590 ATS1YAL020C 1002 nt14.87□□□□□ -0.03
MSG5P38590 URN1YPR152C 1398 nt14.81□□□□□ -0.04
MSG5P38590 RRN5YLR141W 1092 nt14.76□□□□□ -0.05
MSG5P38590 DEP1YAL013W 1218 nt14.75□□□□□ -0.05
MSG5P38590 YDJ1YNL064C 1230 nt14.75□□□□□ -0.05
MSG5P38590 ARE1YCR048W 1833 nt14.69□□□□□ -0.06
MSG5P38590 SSA3YBL075C 1950 nt14.67□□□□□ -0.06
MSG5P38590 SAH1YER043C 1350 nt14.64□□□□□ -0.07
MSG5P38590 OPI9YLR338W 858 nt14.64□□□□□ -0.07
MSG5P38590 POA1YBR022W 534 nt14.53□□□□□ -0.08
MSG5P38590 YHR049C-AYHR049C-A 297 nt14.49□□□□□ -0.09
MSG5P38590 GAR1YHR089C 618 nt14.49□□□□□ -0.09
MSG5P38590 RPN10YHR200W 807 nt14.49□□□□□ -0.09
MSG5P38590 YER088W-BYER088W-B 147 nt14.48□□□□□ -0.09
MSG5P38590 YNL208WYNL208W 600 nt14.45□□□□□ -0.1
MSG5P38590 RSB1YOR049C 1065 nt14.37□□□□□ -0.11
MSG5P38590 BSC6YOL137W 1494 nt14.28□□□□□ -0.12
MSG5P38590 PUN1YLR414C 792 nt14.2□□□□□ -0.14
MSG5P38590 BUD23YCR047C 828 nt14.12□□□□□ -0.15
MSG5P38590 PTC2YER089C 1395 nt14.09□□□□□ -0.15
MSG5P38590 YJR018WYJR018W 363 nt14.09□□□□□ -0.15
MSG5P38590 TIR1YER011W 765 nt14.01□□□□□ -0.17
MSG5P38590 NAB2YGL122C 1578 nt13.93□□□□□ -0.18
MSG5P38590 SSA1YAL005C 1929 nt13.93□□□□□ -0.18
MSG5P38590 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
MSG5P38590 SPT5YML010W 3192 nt13.84□□□□□ -0.19
MSG5P38590 PST2YDR032C 597 nt13.82□□□□□ -0.2
MSG5P38590 FIS1YIL065C 468 nt13.77□□□□□ -0.21
MSG5P38590 DAL1YIR027C 1383 nt13.71□□□□□ -0.21
MSG5P38590 RPP2BYDR382W 333 nt13.71□□□□□ -0.21
MSG5P38590 SRB2YHR041C 633 nt13.7□□□□□ -0.22
MSG5P38590 FPR4YLR449W 1179 nt13.67□□□□□ -0.22
MSG5P38590 INM2YDR287W 879 nt13.6□□□□□ -0.23
MSG5P38590 PHO4YFR034C 939 nt13.6□□□□□ -0.23
MSG5P38590 YBL100CYBL100C 315 nt13.47□□□□□ -0.25
MSG5P38590 SSA4YER103W 1929 nt13.43□□□□□ -0.26
MSG5P38590 YPS1YLR120C 1710 nt13.42□□□□□ -0.26
MSG5P38590 BDH2YAL061W 1254 nt13.42□□□□□ -0.26
MSG5P38590 MEP2YNL142W 1500 nt13.42□□□□□ -0.26
MSG5P38590 WWM1YFL010C 636 nt13.37□□□□□ -0.27
MSG5P38590 SHU1YHL006C 453 nt13.35□□□□□ -0.27
MSG5P38590 FUN26YAL022C 1554 nt13.3□□□□□ -0.28
MSG5P38590 YDR095CYDR095C 411 nt13.3□□□□□ -0.28
MSG5P38590 YHR165W-AYHR165W-A 312 nt13.28□□□□□ -0.28
MSG5P38590 DCW1YKL046C 1350 nt13.24□□□□□ -0.29
MSG5P38590 YAL037C-BYAL037C-B 975 nt13.23□□□□□ -0.29
MSG5P38590 TRM9YML014W 840 nt13.19□□□□□ -0.3
MSG5P38590 LSM3YLR438C-A 270 nt13.18□□□□□ -0.3
MSG5P38590 YGR021WYGR021W 873 nt13.17□□□□□ -0.3
MSG5P38590 HOM6YJR139C 1080 nt13.15□□□□□ -0.3
MSG5P38590 ALF1YNL148C 765 nt13.14□□□□□ -0.31
MSG5P38590 YFL021C-AYFL021C-A 855 nt13.13□□□□□ -0.31
MSG5P38590 YKL097CYKL097C 411 nt13.12□□□□□ -0.31
MSG5P38590 CCT6YDR188W 1641 nt13.1□□□□□ -0.31
MSG5P38590 MNP1YGL068W 585 nt13.07□□□□□ -0.32
MSG5P38590 PTP1YDL230W 1008 nt13.05□□□□□ -0.32
MSG5P38590 RPP2AYOL039W 321 nt13.04□□□□□ -0.32
MSG5P38590 EMI2YDR516C 1503 nt13.03□□□□□ -0.32
MSG5P38590 CAC2YML102W 1407 nt12.99□□□□□ -0.33
MSG5P38590 SUF2tP(AGG)C 72 nt12.98□□□□□ -0.33
MSG5P38590 SUF10tP(AGG)N 72 nt12.98□□□□□ -0.33
MSG5P38590 SIS1YNL007C 1059 nt12.97□□□□□ -0.33
MSG5P38590 BDF1YLR399C 2061 nt12.95□□□□□ -0.34
MSG5P38590 RKM5YLR137W 1104 nt12.95□□□□□ -0.34
MSG5P38590 YDL221WYDL221W 552 nt12.92□□□□□ -0.34
MSG5P38590 YMR090WYMR090W 684 nt12.9□□□□□ -0.34
MSG5P38590 YBR220CYBR220C 1683 nt12.88□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms