RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MTC1P47018 478 aaKnown RBP4.2□□□□□ -1.74
PRP16YKR086W DRS1P32892 752 aaKnown RBP3.88□□□□□ -1.79
PRP16YKR086W FAP1P53971 965 aa3.57□□□□□ -1.84
PRP16YKR086W PRI1P10363 409 aa3.55□□□□□ -1.84
PRP16YKR086W YCK3P39962 524 aa3.51□□□□□ -1.85
PRP16YKR086W AAD16Q02895 342 aa3.44□□□□□ -1.86
PRP16YKR086W AVT3P36062 692 aa3.42□□□□□ -1.86
PRP16YKR086W DIP2Q12220 943 aaPredicted RBP3.42□□□□□ -1.86
PRP16YKR086W PRY3P47033 881 aa3.4□□□□□ -1.87
PRP16YKR086W RPG1P38249 964 aaKnown RBP3.38□□□□□ -1.87
PRP16YKR086W ISW2Q08773 1120 aa3.37□□□□□ -1.87
PRP16YKR086W BFR2Q06631 534 aaKnown RBP3.31□□□□□ -1.88
PRP16YKR086W TSR3Q12094 313 aaKnown RBP3.29□□□□□ -1.88
PRP16YKR086W RSE1Q04693 1361 aaKnown RBP3.25□□□□□ -1.89
PRP16YKR086W HAA1Q12753 694 aaKnown RBP3.21□□□□□ -1.9
PRP16YKR086W SPT21P35209 758 aa3.19□□□□□ -1.9
PRP16YKR086W RPL17AP05740 184 aaKnown RBP3.15□□□□□ -1.91
PRP16YKR086W RPL17BP46990 184 aaKnown RBP3.15□□□□□ -1.91
PRP16YKR086W YKR023WP36119 530 aaKnown RBP3.12□□□□□ -1.91
PRP16YKR086W CDC27P38042 758 aa3.1□□□□□ -1.91
PRP16YKR086W MRPL32P25348 183 aa3.08□□□□□ -1.92
PRP16YKR086W REB1P21538 810 aa3.07□□□□□ -1.92
PRP16YKR086W RIM101P33400 625 aa3.04□□□□□ -1.92
PRP16YKR086W TFC8Q12308 588 aa3.02□□□□□ -1.93
PRP16YKR086W DCD1P06773 312 aa2.98□□□□□ -1.93
PRP16YKR086W YGL015CP33199 130 aa2.98□□□□□ -1.93
PRP16YKR086W HOP09932 586 aa2.97□□□□□ -1.93
PRP16YKR086W OXP1P28273 1286 aa2.96□□□□□ -1.94
PRP16YKR086W TFA1P36100 482 aa2.96□□□□□ -1.94
PRP16YKR086W MAP2P38174 421 aaKnown RBP2.95□□□□□ -1.94
PRP16YKR086W UBP10P53874 792 aaPredicted RBP2.94□□□□□ -1.94
PRP16YKR086W BCH2P36122 765 aa2.92□□□□□ -1.94
PRP16YKR086W SCY1P53009 804 aa2.85□□□□□ -1.95
PRP16YKR086W BDF1P35817 686 aa2.83□□□□□ -1.96
PRP16YKR086W EPS1P40557 701 aa2.82□□□□□ -1.96
PRP16YKR086W YLR271WQ06152 274 aa2.81□□□□□ -1.96
PRP16YKR086W TGL3P40308 642 aa2.8□□□□□ -1.96
PRP16YKR086W BUD31P25337 157 aaPredicted RBP2.8□□□□□ -1.96
PRP16YKR086W MST1P07236 462 aa2.79□□□□□ -1.96
PRP16YKR086W PTP3P40048 928 aa2.79□□□□□ -1.96
PRP16YKR086W PSD2P53037 1138 aaKnown RBP2.79□□□□□ -1.96
PRP16YKR086W YAH1Q12184 172 aaKnown RBP2.79□□□□□ -1.96
PRP16YKR086W SLX5P32828 619 aaKnown RBP2.78□□□□□ -1.96
PRP16YKR086W RSM7P47150 247 aa2.77□□□□□ -1.97
PRP16YKR086W NSR1P27476 414 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
PRP16YKR086W YIL055CP40523 627 aaKnown RBP2.76□□□□□ -1.97
PRP16YKR086W AI2P03876 854 aa2.76□□□□□ -1.97
PRP16YKR086W TIF4632P39936 914 aaKnown RBP2.72□□□□□ -1.97
PRP16YKR086W CST9Q06032 482 aa2.72□□□□□ -1.97
PRP16YKR086W SSP1P38871 571 aa2.7□□□□□ -1.98
PRP16YKR086W VPS29P38759 282 aa2.68□□□□□ -1.98
PRP16YKR086W RCR1P38212 213 aa2.67□□□□□ -1.98
PRP16YKR086W BBC1P47068 1157 aa2.67□□□□□ -1.98
PRP16YKR086W RQC2Q12532 1038 aaKnown RBP2.67□□□□□ -1.98
PRP16YKR086W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.65□□□□□ -1.98not detected
PRP16YKR086W MGA2P40578 1113 aa2.65□□□□□ -1.99
PRP16YKR086W MRM1P25270 412 aa2.64□□□□□ -1.99
PRP16YKR086W STS1P38637 319 aa2.64□□□□□ -1.99
PRP16YKR086W YBL029C-AQ3E756 94 aa2.64□□□□□ -1.99
PRP16YKR086W YAP5P40574 245 aa2.63□□□□□ -1.99
PRP16YKR086W VNX1P42839 908 aa2.63□□□□□ -1.99
PRP16YKR086W YOR238WQ08634 303 aa2.63□□□□□ -1.99
PRP16YKR086W IOC2Q12072 812 aa2.6□□□□□ -1.99
PRP16YKR086W RAM2P29703 316 aa2.59□□□□□ -1.99
PRP16YKR086W SAM3Q08986 587 aa2.59□□□□□ -1.99
PRP16YKR086W YMR1P47147 688 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
PRP16YKR086W NST1P53935 1240 aa2.59□□□□□ -2
PRP16YKR086W RTG3P38165 486 aa2.58□□□□□ -2
PRP16YKR086W UBP9P39967 754 aa2.58□□□□□ -2
PRP16YKR086W AIR2Q12476 344 aaKnown RBP2.58□□□□□ -2
PRP16YKR086W VMA1P17255 1071 aaKnown RBP2.57□□□□□ -2
PRP16YKR086W DBP1P24784 617 aaKnown RBP2.57□□□□□ -2
PRP16YKR086W PIB1Q06651 286 aa2.57□□□□□ -2
PRP16YKR086W FKH1P40466 484 aa2.57□□□□□ -2
PRP16YKR086W YFR006WP43590 535 aa2.55□□□□□ -2
PRP16YKR086W EDS1P38073 919 aa2.55□□□□□ -2
PRP16YKR086W DAN4P47179 1161 aa2.55□□□□□ -2
PRP16YKR086W TIF11P38912 153 aaKnown RBP2.55□□□□□ -2
PRP16YKR086W YOL036WQ08206 761 aa2.55□□□□□ -2
PRP16YKR086W MSB4Q12317 492 aa2.53□□□□□ -2
PRP16YKR086W MAK11P20484 414 aaKnown RBP2.53□□□□□ -2
PRP16YKR086W SOL3P38858 249 aa2.53□□□□□ -2
PRP16YKR086W SPP1Q03012 353 aa2.52□□□□□ -2.01
PRP16YKR086W WSC3Q12215 556 aa2.52□□□□□ -2.01
PRP16YKR086W SIS1P25294 352 aaKnown RBP2.52□□□□□ -2.01
PRP16YKR086W TRP5P00931 707 aaKnown RBP2.51□□□□□ -2.01
PRP16YKR086W LDB19Q12502 818 aa2.51□□□□□ -2.01
PRP16YKR086W YDR344CQ05510 147 aa2.51□□□□□ -2.01
PRP16YKR086W SET4P42948 560 aa2.5□□□□□ -2.01
PRP16YKR086W GTT3P39996 337 aa2.49□□□□□ -2.01
PRP16YKR086W ULI1P43604 169 aa2.49□□□□□ -2.01
PRP16YKR086W DMA1P38823 416 aa2.49□□□□□ -2.01
PRP16YKR086W ILV3P39522 585 aaKnown RBP2.49□□□□□ -2.01
PRP16YKR086W PTC3P34221 468 aaKnown RBP2.48□□□□□ -2.01
PRP16YKR086W COQ8P27697 501 aa2.48□□□□□ -2.01
PRP16YKR086W SEC61P32915 480 aa2.47□□□□□ -2.01
PRP16YKR086W EAP1P36041 632 aaKnown RBP2.46□□□□□ -2.02
PRP16YKR086W RTG1P32607 177 aa2.46□□□□□ -2.02
PRP16YKR086W YNL035CP53962 389 aaKnown RBP2.46□□□□□ -2.02
PRP16YKR086W YEL023CP39992 682 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms