RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MTC1P47018 478 aaKnown RBP4.2□□□□□ -1.74
PRP16YKR086W DRS1P32892 752 aaKnown RBP3.88□□□□□ -1.79
PRP16YKR086W FAP1P53971 965 aa3.57□□□□□ -1.84
PRP16YKR086W PRI1P10363 409 aa3.55□□□□□ -1.84
PRP16YKR086W YCK3P39962 524 aa3.51□□□□□ -1.85
PRP16YKR086W AAD16Q02895 342 aa3.44□□□□□ -1.86
PRP16YKR086W AVT3P36062 692 aa3.42□□□□□ -1.86
PRP16YKR086W DIP2Q12220 943 aaPredicted RBP3.42□□□□□ -1.86
PRP16YKR086W PRY3P47033 881 aa3.4□□□□□ -1.87
PRP16YKR086W RPG1P38249 964 aaKnown RBP3.38□□□□□ -1.87
PRP16YKR086W ISW2Q08773 1120 aa3.37□□□□□ -1.87
PRP16YKR086W BFR2Q06631 534 aaKnown RBP3.31□□□□□ -1.88
PRP16YKR086W TSR3Q12094 313 aaKnown RBP3.29□□□□□ -1.88
PRP16YKR086W RSE1Q04693 1361 aaKnown RBP3.25□□□□□ -1.89
PRP16YKR086W HAA1Q12753 694 aaKnown RBP3.21□□□□□ -1.9
PRP16YKR086W SPT21P35209 758 aa3.19□□□□□ -1.9
PRP16YKR086W RPL17AP05740 184 aaKnown RBP3.15□□□□□ -1.91
PRP16YKR086W RPL17BP46990 184 aaKnown RBP3.15□□□□□ -1.91
PRP16YKR086W YKR023WP36119 530 aaKnown RBP3.12□□□□□ -1.91
PRP16YKR086W CDC27P38042 758 aa3.1□□□□□ -1.91
PRP16YKR086W MRPL32P25348 183 aa3.08□□□□□ -1.92
PRP16YKR086W REB1P21538 810 aa3.07□□□□□ -1.92
PRP16YKR086W RIM101P33400 625 aa3.04□□□□□ -1.92
PRP16YKR086W TFC8Q12308 588 aa3.02□□□□□ -1.93
PRP16YKR086W DCD1P06773 312 aa2.98□□□□□ -1.93
PRP16YKR086W YGL015CP33199 130 aa2.98□□□□□ -1.93
PRP16YKR086W HOP09932 586 aa2.97□□□□□ -1.93
PRP16YKR086W OXP1P28273 1286 aa2.96□□□□□ -1.94
PRP16YKR086W TFA1P36100 482 aa2.96□□□□□ -1.94
PRP16YKR086W MAP2P38174 421 aaKnown RBP2.95□□□□□ -1.94
PRP16YKR086W UBP10P53874 792 aaPredicted RBP2.94□□□□□ -1.94
PRP16YKR086W BCH2P36122 765 aa2.92□□□□□ -1.94
PRP16YKR086W SCY1P53009 804 aa2.85□□□□□ -1.95
PRP16YKR086W BDF1P35817 686 aa2.83□□□□□ -1.96
PRP16YKR086W EPS1P40557 701 aa2.82□□□□□ -1.96
PRP16YKR086W YLR271WQ06152 274 aa2.81□□□□□ -1.96
PRP16YKR086W TGL3P40308 642 aa2.8□□□□□ -1.96
PRP16YKR086W BUD31P25337 157 aaPredicted RBP2.8□□□□□ -1.96
PRP16YKR086W MST1P07236 462 aa2.79□□□□□ -1.96
PRP16YKR086W PTP3P40048 928 aa2.79□□□□□ -1.96
PRP16YKR086W PSD2P53037 1138 aaKnown RBP2.79□□□□□ -1.96
PRP16YKR086W YAH1Q12184 172 aaKnown RBP2.79□□□□□ -1.96
PRP16YKR086W SLX5P32828 619 aaKnown RBP2.78□□□□□ -1.96
PRP16YKR086W RSM7P47150 247 aa2.77□□□□□ -1.97
PRP16YKR086W NSR1P27476 414 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
PRP16YKR086W YIL055CP40523 627 aaKnown RBP2.76□□□□□ -1.97
PRP16YKR086W AI2P03876 854 aa2.76□□□□□ -1.97
PRP16YKR086W TIF4632P39936 914 aaKnown RBP2.72□□□□□ -1.97
PRP16YKR086W CST9Q06032 482 aa2.72□□□□□ -1.97
PRP16YKR086W SSP1P38871 571 aa2.7□□□□□ -1.98
PRP16YKR086W VPS29P38759 282 aa2.68□□□□□ -1.98
PRP16YKR086W RCR1P38212 213 aa2.67□□□□□ -1.98
PRP16YKR086W BBC1P47068 1157 aa2.67□□□□□ -1.98
PRP16YKR086W RQC2Q12532 1038 aaKnown RBP2.67□□□□□ -1.98
PRP16YKR086W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.65□□□□□ -1.98not detected
PRP16YKR086W MGA2P40578 1113 aa2.65□□□□□ -1.99
PRP16YKR086W MRM1P25270 412 aa2.64□□□□□ -1.99
PRP16YKR086W STS1P38637 319 aa2.64□□□□□ -1.99
PRP16YKR086W YBL029C-AQ3E756 94 aa2.64□□□□□ -1.99
PRP16YKR086W YAP5P40574 245 aa2.63□□□□□ -1.99
PRP16YKR086W VNX1P42839 908 aa2.63□□□□□ -1.99
PRP16YKR086W YOR238WQ08634 303 aa2.63□□□□□ -1.99
PRP16YKR086W IOC2Q12072 812 aa2.6□□□□□ -1.99
PRP16YKR086W RAM2P29703 316 aa2.59□□□□□ -1.99
PRP16YKR086W SAM3Q08986 587 aa2.59□□□□□ -1.99
PRP16YKR086W YMR1P47147 688 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
PRP16YKR086W NST1P53935 1240 aa2.59□□□□□ -2
PRP16YKR086W RTG3P38165 486 aa2.58□□□□□ -2
PRP16YKR086W UBP9P39967 754 aa2.58□□□□□ -2
PRP16YKR086W AIR2Q12476 344 aaKnown RBP2.58□□□□□ -2
PRP16YKR086W VMA1P17255 1071 aaKnown RBP2.57□□□□□ -2
PRP16YKR086W DBP1P24784 617 aaKnown RBP2.57□□□□□ -2
PRP16YKR086W PIB1Q06651 286 aa2.57□□□□□ -2
PRP16YKR086W FKH1P40466 484 aa2.57□□□□□ -2
PRP16YKR086W YFR006WP43590 535 aa2.55□□□□□ -2
PRP16YKR086W EDS1P38073 919 aa2.55□□□□□ -2
PRP16YKR086W DAN4P47179 1161 aa2.55□□□□□ -2
PRP16YKR086W TIF11P38912 153 aaKnown RBP2.55□□□□□ -2
PRP16YKR086W YOL036WQ08206 761 aa2.55□□□□□ -2
PRP16YKR086W MSB4Q12317 492 aa2.53□□□□□ -2
PRP16YKR086W MAK11P20484 414 aaKnown RBP2.53□□□□□ -2
PRP16YKR086W SOL3P38858 249 aa2.53□□□□□ -2
PRP16YKR086W SPP1Q03012 353 aa2.52□□□□□ -2.01
PRP16YKR086W WSC3Q12215 556 aa2.52□□□□□ -2.01
PRP16YKR086W SIS1P25294 352 aaKnown RBP2.52□□□□□ -2.01
PRP16YKR086W TRP5P00931 707 aaKnown RBP2.51□□□□□ -2.01
PRP16YKR086W LDB19Q12502 818 aa2.51□□□□□ -2.01
PRP16YKR086W YDR344CQ05510 147 aa2.51□□□□□ -2.01
PRP16YKR086W SET4P42948 560 aa2.5□□□□□ -2.01
PRP16YKR086W GTT3P39996 337 aa2.49□□□□□ -2.01
PRP16YKR086W ULI1P43604 169 aa2.49□□□□□ -2.01
PRP16YKR086W DMA1P38823 416 aa2.49□□□□□ -2.01
PRP16YKR086W ILV3P39522 585 aaKnown RBP2.49□□□□□ -2.01
PRP16YKR086W PTC3P34221 468 aaKnown RBP2.48□□□□□ -2.01
PRP16YKR086W COQ8P27697 501 aa2.48□□□□□ -2.01
PRP16YKR086W SEC61P32915 480 aa2.47□□□□□ -2.01
PRP16YKR086W EAP1P36041 632 aaKnown RBP2.46□□□□□ -2.02
PRP16YKR086W RTG1P32607 177 aa2.46□□□□□ -2.02
PRP16YKR086W YNL035CP53962 389 aaKnown RBP2.46□□□□□ -2.02
PRP16YKR086W YEL023CP39992 682 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms