Protein–RNA interactions for Protein: P28003

FUN19, SWIRM domain-containing protein FUN19, yeastyeast

Predicted RBP Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FUN19P28003 NSR1YGR159C 1245 nt18.17■□□□□ 0.5
FUN19P28003 YML009W-BYML009W-B 477 nt18.04■□□□□ 0.48
FUN19P28003 NOP1YDL014W 984 nt17.43■□□□□ 0.38
FUN19P28003 MDJ1YFL016C 1536 nt16.4■□□□□ 0.22
FUN19P28003 YKL036CYKL036C 393 nt15.8■□□□□ 0.12
FUN19P28003 SRX1YKL086W 384 nt15.2■□□□□ 0.02
FUN19P28003 Q0297Q0297 156 nt15.13■□□□□ 0.01
FUN19P28003 YJL027CYJL027C 417 nt15.13■□□□□ 0.01
FUN19P28003 YCR051WYCR051W 669 nt14.43□□□□□ -0.1
FUN19P28003 DBP2YNL112W 1641 nt14.37□□□□□ -0.11
FUN19P28003 SCS3YGL126W 1143 nt14.21□□□□□ -0.13
FUN19P28003 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
FUN19P28003 TRN1tP(UGG)A 72 nt13.91□□□□□ -0.18
FUN19P28003 SUF9tP(UGG)F 72 nt13.91□□□□□ -0.18
FUN19P28003 SUF8tP(UGG)H 72 nt13.91□□□□□ -0.18
FUN19P28003 tP(UGG)LtP(UGG)L 72 nt13.91□□□□□ -0.18
FUN19P28003 SUF7tP(UGG)M 72 nt13.91□□□□□ -0.18
FUN19P28003 tP(UGG)N1tP(UGG)N1 72 nt13.91□□□□□ -0.18
FUN19P28003 tP(UGG)N2tP(UGG)N2 72 nt13.91□□□□□ -0.18
FUN19P28003 tP(UGG)O1tP(UGG)O1 72 nt13.91□□□□□ -0.18
FUN19P28003 SUF11tP(UGG)O2 72 nt13.91□□□□□ -0.18
FUN19P28003 CCC1YLR220W 969 nt13.8□□□□□ -0.2
FUN19P28003 RTC3YHR087W 336 nt13.77□□□□□ -0.21
FUN19P28003 YOL085CYOL085C 342 nt13.68□□□□□ -0.22
FUN19P28003 RPP1BYDL130W 321 nt13.58□□□□□ -0.24
FUN19P28003 PKP1YIL042C 1185 nt13.52□□□□□ -0.25
FUN19P28003 RVS167YDR388W 1449 nt13.51□□□□□ -0.25
FUN19P28003 SCJ1YMR214W 1134 nt13.32□□□□□ -0.28
FUN19P28003 tP(UGG)O3tP(UGG)O3 72 nt13.08□□□□□ -0.32
FUN19P28003 PET122YER153C 765 nt13.01□□□□□ -0.33
FUN19P28003 PUT4YOR348C 1884 nt12.97□□□□□ -0.33
FUN19P28003 SHR5YOL110W 714 nt12.94□□□□□ -0.34
FUN19P28003 SCR1SCR1 522 nt12.83□□□□□ -0.36
FUN19P28003 SSA3YBL075C 1950 nt12.78□□□□□ -0.36
FUN19P28003 URN1YPR152C 1398 nt12.76□□□□□ -0.37
FUN19P28003 DEP1YAL013W 1218 nt12.68□□□□□ -0.38
FUN19P28003 ARE1YCR048W 1833 nt12.66□□□□□ -0.38
FUN19P28003 YDJ1YNL064C 1230 nt12.64□□□□□ -0.39
FUN19P28003 ATS1YAL020C 1002 nt12.63□□□□□ -0.39
FUN19P28003 SAH1YER043C 1350 nt12.62□□□□□ -0.39
FUN19P28003 RRN5YLR141W 1092 nt12.61□□□□□ -0.39
FUN19P28003 OPI9YLR338W 858 nt12.61□□□□□ -0.39
FUN19P28003 POA1YBR022W 534 nt12.57□□□□□ -0.4
FUN19P28003 RPN10YHR200W 807 nt12.52□□□□□ -0.41
FUN19P28003 YHR049C-AYHR049C-A 297 nt12.51□□□□□ -0.41
FUN19P28003 YNL208WYNL208W 600 nt12.45□□□□□ -0.42
FUN19P28003 GAR1YHR089C 618 nt12.43□□□□□ -0.42
FUN19P28003 YER088W-BYER088W-B 147 nt12.35□□□□□ -0.43
FUN19P28003 BSC6YOL137W 1494 nt12.34□□□□□ -0.43
FUN19P28003 RSB1YOR049C 1065 nt12.28□□□□□ -0.44
FUN19P28003 PUN1YLR414C 792 nt12.26□□□□□ -0.45
FUN19P28003 BUD23YCR047C 828 nt12.22□□□□□ -0.45
FUN19P28003 PTC2YER089C 1395 nt12.17□□□□□ -0.46
FUN19P28003 YJR018WYJR018W 363 nt12.15□□□□□ -0.46
FUN19P28003 NAB2YGL122C 1578 nt12.05□□□□□ -0.48
FUN19P28003 TIR1YER011W 765 nt12.01□□□□□ -0.49
FUN19P28003 SPT5YML010W 3192 nt11.93□□□□□ -0.5
FUN19P28003 SSA1YAL005C 1929 nt11.92□□□□□ -0.5
FUN19P28003 RPP2BYDR382W 333 nt11.86□□□□□ -0.51
FUN19P28003 YJR120WYJR120W 351 nt11.86□□□□□ -0.51
FUN19P28003 DAL1YIR027C 1383 nt11.83□□□□□ -0.52
FUN19P28003 FPR4YLR449W 1179 nt11.83□□□□□ -0.52
FUN19P28003 FIS1YIL065C 468 nt11.82□□□□□ -0.52
FUN19P28003 INM2YDR287W 879 nt11.76□□□□□ -0.53
FUN19P28003 PST2YDR032C 597 nt11.73□□□□□ -0.53
FUN19P28003 PHO4YFR034C 939 nt11.72□□□□□ -0.53
FUN19P28003 SSA4YER103W 1929 nt11.66□□□□□ -0.54
FUN19P28003 SRB2YHR041C 633 nt11.63□□□□□ -0.55
FUN19P28003 YBL100CYBL100C 315 nt11.61□□□□□ -0.55
FUN19P28003 MEP2YNL142W 1500 nt11.6□□□□□ -0.55
FUN19P28003 YPS1YLR120C 1710 nt11.58□□□□□ -0.56
FUN19P28003 BDH2YAL061W 1254 nt11.54□□□□□ -0.56
FUN19P28003 YHR165W-AYHR165W-A 312 nt11.5□□□□□ -0.57
FUN19P28003 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
FUN19P28003 FUN26YAL022C 1554 nt11.45□□□□□ -0.58
FUN19P28003 WWM1YFL010C 636 nt11.44□□□□□ -0.58
FUN19P28003 DCW1YKL046C 1350 nt11.41□□□□□ -0.58
FUN19P28003 TRM9YML014W 840 nt11.4□□□□□ -0.58
FUN19P28003 ALF1YNL148C 765 nt11.37□□□□□ -0.59
FUN19P28003 LSM3YLR438C-A 270 nt11.34□□□□□ -0.59
FUN19P28003 SHU1YHL006C 453 nt11.33□□□□□ -0.6
FUN19P28003 YGR021WYGR021W 873 nt11.29□□□□□ -0.6
FUN19P28003 CCT6YDR188W 1641 nt11.27□□□□□ -0.6
FUN19P28003 EMI2YDR516C 1503 nt11.27□□□□□ -0.61
FUN19P28003 YAL037C-BYAL037C-B 975 nt11.26□□□□□ -0.61
FUN19P28003 RPP2AYOL039W 321 nt11.26□□□□□ -0.61
FUN19P28003 YFL021C-AYFL021C-A 855 nt11.25□□□□□ -0.61
FUN19P28003 YMR090WYMR090W 684 nt11.25□□□□□ -0.61
FUN19P28003 SUF2tP(AGG)C 72 nt11.22□□□□□ -0.61
FUN19P28003 SUF10tP(AGG)N 72 nt11.22□□□□□ -0.61
FUN19P28003 BDF1YLR399C 2061 nt11.22□□□□□ -0.61
FUN19P28003 PTP1YDL230W 1008 nt11.21□□□□□ -0.61
FUN19P28003 Q0182Q0182 405 nt11.21□□□□□ -0.61
FUN19P28003 HOM6YJR139C 1080 nt11.21□□□□□ -0.61
FUN19P28003 CAC2YML102W 1407 nt11.18□□□□□ -0.62
FUN19P28003 SIS1YNL007C 1059 nt11.17□□□□□ -0.62
FUN19P28003 YDL221WYDL221W 552 nt11.16□□□□□ -0.62
FUN19P28003 YBR220CYBR220C 1683 nt11.14□□□□□ -0.63
FUN19P28003 YKL097CYKL097C 411 nt11.14□□□□□ -0.63
FUN19P28003 MNP1YGL068W 585 nt11.13□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms