Protein–RNA interactions for Protein: P33749

MSN4, Zinc finger protein MSN4, yeastyeast

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSN4P33749 YML009W-BYML009W-B 477 nt18.36■□□□□ 0.53
MSN4P33749 NSR1YGR159C 1245 nt18.33■□□□□ 0.52
MSN4P33749 NOP1YDL014W 984 nt17.81■□□□□ 0.44
MSN4P33749 MDJ1YFL016C 1536 nt16.39■□□□□ 0.21
MSN4P33749 YKL036CYKL036C 393 nt16.27■□□□□ 0.2
MSN4P33749 SRX1YKL086W 384 nt15.51■□□□□ 0.07
MSN4P33749 Q0297Q0297 156 nt15.48■□□□□ 0.07
MSN4P33749 YJL027CYJL027C 417 nt15.2■□□□□ 0.02
MSN4P33749 YCR051WYCR051W 669 nt14.76□□□□□ -0.05
MSN4P33749 SCS3YGL126W 1143 nt14.71□□□□□ -0.05
MSN4P33749 DBP2YNL112W 1641 nt14.38□□□□□ -0.11
MSN4P33749 TRN1tP(UGG)A 72 nt14.08□□□□□ -0.16
MSN4P33749 SUF9tP(UGG)F 72 nt14.08□□□□□ -0.16
MSN4P33749 SUF8tP(UGG)H 72 nt14.08□□□□□ -0.16
MSN4P33749 tP(UGG)LtP(UGG)L 72 nt14.08□□□□□ -0.16
MSN4P33749 SUF7tP(UGG)M 72 nt14.08□□□□□ -0.16
MSN4P33749 tP(UGG)N1tP(UGG)N1 72 nt14.08□□□□□ -0.16
MSN4P33749 tP(UGG)N2tP(UGG)N2 72 nt14.08□□□□□ -0.16
MSN4P33749 tP(UGG)O1tP(UGG)O1 72 nt14.08□□□□□ -0.16
MSN4P33749 SUF11tP(UGG)O2 72 nt14.08□□□□□ -0.16
MSN4P33749 YOL085CYOL085C 342 nt14.08□□□□□ -0.16
MSN4P33749 CCC1YLR220W 969 nt14.02□□□□□ -0.17
MSN4P33749 YBR190WYBR190W 312 nt14.02□□□□□ -0.17
MSN4P33749 RPP1BYDL130W 321 nt13.91□□□□□ -0.18
MSN4P33749 PKP1YIL042C 1185 nt13.91□□□□□ -0.18
MSN4P33749 RTC3YHR087W 336 nt13.78□□□□□ -0.2
MSN4P33749 RVS167YDR388W 1449 nt13.64□□□□□ -0.23
MSN4P33749 SCJ1YMR214W 1134 nt13.42□□□□□ -0.26
MSN4P33749 SSA3YBL075C 1950 nt13.33□□□□□ -0.28
MSN4P33749 tP(UGG)O3tP(UGG)O3 72 nt13.3□□□□□ -0.28
MSN4P33749 PET122YER153C 765 nt13.29□□□□□ -0.28
MSN4P33749 SCR1SCR1 522 nt13.19□□□□□ -0.3
MSN4P33749 ATS1YAL020C 1002 nt13.13□□□□□ -0.31
MSN4P33749 SHR5YOL110W 714 nt13.06□□□□□ -0.32
MSN4P33749 RRN5YLR141W 1092 nt12.92□□□□□ -0.34
MSN4P33749 YDJ1YNL064C 1230 nt12.86□□□□□ -0.35
MSN4P33749 URN1YPR152C 1398 nt12.79□□□□□ -0.36
MSN4P33749 PUT4YOR348C 1884 nt12.78□□□□□ -0.36
MSN4P33749 DEP1YAL013W 1218 nt12.76□□□□□ -0.37
MSN4P33749 YER088W-BYER088W-B 147 nt12.64□□□□□ -0.39
MSN4P33749 GAR1YHR089C 618 nt12.64□□□□□ -0.39
MSN4P33749 RSB1YOR049C 1065 nt12.64□□□□□ -0.39
MSN4P33749 RPN10YHR200W 807 nt12.62□□□□□ -0.39
MSN4P33749 OPI9YLR338W 858 nt12.61□□□□□ -0.39
MSN4P33749 SAH1YER043C 1350 nt12.58□□□□□ -0.4
MSN4P33749 YNL208WYNL208W 600 nt12.54□□□□□ -0.4
MSN4P33749 ARE1YCR048W 1833 nt12.51□□□□□ -0.41
MSN4P33749 POA1YBR022W 534 nt12.43□□□□□ -0.42
MSN4P33749 YHR049C-AYHR049C-A 297 nt12.4□□□□□ -0.42
MSN4P33749 PUN1YLR414C 792 nt12.28□□□□□ -0.44
MSN4P33749 TIR1YER011W 765 nt12.2□□□□□ -0.46
MSN4P33749 YJR018WYJR018W 363 nt12.2□□□□□ -0.46
MSN4P33749 BSC6YOL137W 1494 nt12.16□□□□□ -0.46
MSN4P33749 BUD23YCR047C 828 nt12.16□□□□□ -0.46
MSN4P33749 PST2YDR032C 597 nt12.16□□□□□ -0.46
MSN4P33749 PTC2YER089C 1395 nt12.15□□□□□ -0.46
MSN4P33749 SSA1YAL005C 1929 nt12.04□□□□□ -0.48
MSN4P33749 NAB2YGL122C 1578 nt12□□□□□ -0.49
MSN4P33749 RPP2BYDR382W 333 nt11.97□□□□□ -0.49
MSN4P33749 SPT5YML010W 3192 nt11.9□□□□□ -0.5
MSN4P33749 YJR120WYJR120W 351 nt11.88□□□□□ -0.51
MSN4P33749 FPR4YLR449W 1179 nt11.85□□□□□ -0.51
MSN4P33749 DAL1YIR027C 1383 nt11.81□□□□□ -0.52
MSN4P33749 INM2YDR287W 879 nt11.8□□□□□ -0.52
MSN4P33749 SRB2YHR041C 633 nt11.76□□□□□ -0.53
MSN4P33749 FIS1YIL065C 468 nt11.75□□□□□ -0.53
MSN4P33749 SSA4YER103W 1929 nt11.72□□□□□ -0.53
MSN4P33749 SHU1YHL006C 453 nt11.7□□□□□ -0.54
MSN4P33749 PHO4YFR034C 939 nt11.69□□□□□ -0.54
MSN4P33749 YKL097CYKL097C 411 nt11.66□□□□□ -0.54
MSN4P33749 YBL100CYBL100C 315 nt11.65□□□□□ -0.54
MSN4P33749 BDH2YAL061W 1254 nt11.64□□□□□ -0.55
MSN4P33749 WWM1YFL010C 636 nt11.63□□□□□ -0.55
MSN4P33749 Q0182Q0182 405 nt11.61□□□□□ -0.55
MSN4P33749 YAL037C-BYAL037C-B 975 nt11.59□□□□□ -0.55
MSN4P33749 YGR021WYGR021W 873 nt11.55□□□□□ -0.56
MSN4P33749 FUN26YAL022C 1554 nt11.5□□□□□ -0.57
MSN4P33749 TRM9YML014W 840 nt11.5□□□□□ -0.57
MSN4P33749 YPS1YLR120C 1710 nt11.49□□□□□ -0.57
MSN4P33749 LSM3YLR438C-A 270 nt11.47□□□□□ -0.57
MSN4P33749 YFL021C-AYFL021C-A 855 nt11.45□□□□□ -0.58
MSN4P33749 HOM6YJR139C 1080 nt11.45□□□□□ -0.58
MSN4P33749 YHR165W-AYHR165W-A 312 nt11.44□□□□□ -0.58
MSN4P33749 ALF1YNL148C 765 nt11.43□□□□□ -0.58
MSN4P33749 BDF1YLR399C 2061 nt11.42□□□□□ -0.58
MSN4P33749 MEP2YNL142W 1500 nt11.41□□□□□ -0.58
MSN4P33749 YDR095CYDR095C 411 nt11.39□□□□□ -0.59
MSN4P33749 MNP1YGL068W 585 nt11.39□□□□□ -0.59
MSN4P33749 FPS1YLL043W 2010 nt11.39□□□□□ -0.59
MSN4P33749 CCT6YDR188W 1641 nt11.32□□□□□ -0.6
MSN4P33749 SUF2tP(AGG)C 72 nt11.3□□□□□ -0.6
MSN4P33749 SUF10tP(AGG)N 72 nt11.3□□□□□ -0.6
MSN4P33749 RKM5YLR137W 1104 nt11.3□□□□□ -0.6
MSN4P33749 TAT1YBR069C 1860 nt11.23□□□□□ -0.61
MSN4P33749 DCW1YKL046C 1350 nt11.22□□□□□ -0.61
MSN4P33749 RPP2AYOL039W 321 nt11.21□□□□□ -0.61
MSN4P33749 NVJ2YPR091C 2313 nt11.2□□□□□ -0.62
MSN4P33749 NPL3YDR432W 1245 nt11.18□□□□□ -0.62
MSN4P33749 YOL037CYOL037C 354 nt11.17□□□□□ -0.62
MSN4P33749 SIS1YNL007C 1059 nt11.16□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms