Protein–RNA interactions for Protein: Q08826

SNX3, Sorting nexin-3, yeastyeast

Known RBP Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX3Q08826 NSR1YGR159C 1245 nt19.66■□□□□ 0.74
SNX3Q08826 YML009W-BYML009W-B 477 nt19.44■□□□□ 0.7
SNX3Q08826 NOP1YDL014W 984 nt18.6■□□□□ 0.57
SNX3Q08826 MDJ1YFL016C 1536 nt18.06■□□□□ 0.48
SNX3Q08826 YKL036CYKL036C 393 nt16.71■□□□□ 0.27
SNX3Q08826 YJL027CYJL027C 417 nt16.56■□□□□ 0.24
SNX3Q08826 SRX1YKL086W 384 nt16.26■□□□□ 0.19
SNX3Q08826 Q0297Q0297 156 nt16.1■□□□□ 0.17
SNX3Q08826 DBP2YNL112W 1641 nt15.72■□□□□ 0.11
SNX3Q08826 YCR051WYCR051W 669 nt15.45■□□□□ 0.06
SNX3Q08826 YBR190WYBR190W 312 nt15.45■□□□□ 0.06
SNX3Q08826 RTC3YHR087W 336 nt15.14■□□□□ 0.01
SNX3Q08826 TRN1tP(UGG)A 72 nt15.02■□□□□ -0
SNX3Q08826 SUF9tP(UGG)F 72 nt15.02■□□□□ -0
SNX3Q08826 SUF8tP(UGG)H 72 nt15.02■□□□□ -0
SNX3Q08826 tP(UGG)LtP(UGG)L 72 nt15.02■□□□□ -0
SNX3Q08826 SUF7tP(UGG)M 72 nt15.02■□□□□ -0
SNX3Q08826 tP(UGG)N1tP(UGG)N1 72 nt15.02■□□□□ -0
SNX3Q08826 tP(UGG)N2tP(UGG)N2 72 nt15.02■□□□□ -0
SNX3Q08826 tP(UGG)O1tP(UGG)O1 72 nt15.02■□□□□ -0
SNX3Q08826 SUF11tP(UGG)O2 72 nt15.02■□□□□ -0
SNX3Q08826 SCS3YGL126W 1143 nt14.96□□□□□ -0.01
SNX3Q08826 CCC1YLR220W 969 nt14.94□□□□□ -0.02
SNX3Q08826 SSA3YBL075C 1950 nt14.73□□□□□ -0.05
SNX3Q08826 RVS167YDR388W 1449 nt14.65□□□□□ -0.06
SNX3Q08826 SCJ1YMR214W 1134 nt14.52□□□□□ -0.09
SNX3Q08826 YOL085CYOL085C 342 nt14.49□□□□□ -0.09
SNX3Q08826 RPP1BYDL130W 321 nt14.47□□□□□ -0.09
SNX3Q08826 PUT4YOR348C 1884 nt14.44□□□□□ -0.1
SNX3Q08826 PKP1YIL042C 1185 nt14.41□□□□□ -0.1
SNX3Q08826 tP(UGG)O3tP(UGG)O3 72 nt14.05□□□□□ -0.16
SNX3Q08826 ARE1YCR048W 1833 nt14.04□□□□□ -0.16
SNX3Q08826 SHR5YOL110W 714 nt14.01□□□□□ -0.17
SNX3Q08826 POA1YBR022W 534 nt13.99□□□□□ -0.17
SNX3Q08826 URN1YPR152C 1398 nt13.97□□□□□ -0.17
SNX3Q08826 PET122YER153C 765 nt13.94□□□□□ -0.18
SNX3Q08826 SAH1YER043C 1350 nt13.93□□□□□ -0.18
SNX3Q08826 YHR049C-AYHR049C-A 297 nt13.9□□□□□ -0.18
SNX3Q08826 DEP1YAL013W 1218 nt13.88□□□□□ -0.19
SNX3Q08826 OPI9YLR338W 858 nt13.83□□□□□ -0.2
SNX3Q08826 BSC6YOL137W 1494 nt13.78□□□□□ -0.2
SNX3Q08826 RPN10YHR200W 807 nt13.6□□□□□ -0.23
SNX3Q08826 SCR1SCR1 522 nt13.6□□□□□ -0.23
SNX3Q08826 BUD23YCR047C 828 nt13.55□□□□□ -0.24
SNX3Q08826 YDJ1YNL064C 1230 nt13.54□□□□□ -0.24
SNX3Q08826 YNL208WYNL208W 600 nt13.52□□□□□ -0.25
SNX3Q08826 RRN5YLR141W 1092 nt13.46□□□□□ -0.25
SNX3Q08826 SPT5YML010W 3192 nt13.43□□□□□ -0.26
SNX3Q08826 PUN1YLR414C 792 nt13.42□□□□□ -0.26
SNX3Q08826 GAR1YHR089C 618 nt13.41□□□□□ -0.26
SNX3Q08826 PTC2YER089C 1395 nt13.39□□□□□ -0.27
SNX3Q08826 YJR018WYJR018W 363 nt13.28□□□□□ -0.28
SNX3Q08826 SSA4YER103W 1929 nt13.26□□□□□ -0.29
SNX3Q08826 NAB2YGL122C 1578 nt13.25□□□□□ -0.29
SNX3Q08826 ATS1YAL020C 1002 nt13.21□□□□□ -0.29
SNX3Q08826 YER088W-BYER088W-B 147 nt13.19□□□□□ -0.3
SNX3Q08826 FIS1YIL065C 468 nt13.05□□□□□ -0.32
SNX3Q08826 RSB1YOR049C 1065 nt13.05□□□□□ -0.32
SNX3Q08826 FPR4YLR449W 1179 nt13.02□□□□□ -0.33
SNX3Q08826 DAL1YIR027C 1383 nt12.98□□□□□ -0.33
SNX3Q08826 YJR120WYJR120W 351 nt12.98□□□□□ -0.33
SNX3Q08826 MEP2YNL142W 1500 nt12.96□□□□□ -0.33
SNX3Q08826 TIR1YER011W 765 nt12.95□□□□□ -0.34
SNX3Q08826 SSA1YAL005C 1929 nt12.92□□□□□ -0.34
SNX3Q08826 PHO4YFR034C 939 nt12.9□□□□□ -0.34
SNX3Q08826 RPP2BYDR382W 333 nt12.86□□□□□ -0.35
SNX3Q08826 INM2YDR287W 879 nt12.82□□□□□ -0.36
SNX3Q08826 YPS1YLR120C 1710 nt12.79□□□□□ -0.36
SNX3Q08826 DCW1YKL046C 1350 nt12.79□□□□□ -0.36
SNX3Q08826 BDF1YLR399C 2061 nt12.76□□□□□ -0.37
SNX3Q08826 YHR165W-AYHR165W-A 312 nt12.73□□□□□ -0.37
SNX3Q08826 YBL100CYBL100C 315 nt12.68□□□□□ -0.38
SNX3Q08826 SRB2YHR041C 633 nt12.64□□□□□ -0.39
SNX3Q08826 YDR095CYDR095C 411 nt12.63□□□□□ -0.39
SNX3Q08826 TAT1YBR069C 1860 nt12.59□□□□□ -0.39
SNX3Q08826 EMI2YDR516C 1503 nt12.58□□□□□ -0.4
SNX3Q08826 BDH2YAL061W 1254 nt12.51□□□□□ -0.41
SNX3Q08826 FUN26YAL022C 1554 nt12.51□□□□□ -0.41
SNX3Q08826 YMR090WYMR090W 684 nt12.5□□□□□ -0.41
SNX3Q08826 YBR220CYBR220C 1683 nt12.5□□□□□ -0.41
SNX3Q08826 ALF1YNL148C 765 nt12.44□□□□□ -0.42
SNX3Q08826 CAC2YML102W 1407 nt12.44□□□□□ -0.42
SNX3Q08826 YDL221WYDL221W 552 nt12.43□□□□□ -0.42
SNX3Q08826 PTP1YDL230W 1008 nt12.41□□□□□ -0.42
SNX3Q08826 RPP2AYOL039W 321 nt12.4□□□□□ -0.42
SNX3Q08826 SDH1YKL148C 1923 nt12.37□□□□□ -0.43
SNX3Q08826 TRM9YML014W 840 nt12.37□□□□□ -0.43
SNX3Q08826 WWM1YFL010C 636 nt12.33□□□□□ -0.44
SNX3Q08826 PST2YDR032C 597 nt12.3□□□□□ -0.44
SNX3Q08826 CCT6YDR188W 1641 nt12.26□□□□□ -0.45
SNX3Q08826 SCC4YER147C 1875 nt12.23□□□□□ -0.45
SNX3Q08826 IRC15YPL017C 1500 nt12.23□□□□□ -0.45
SNX3Q08826 SIS1YNL007C 1059 nt12.22□□□□□ -0.45
SNX3Q08826 LSM3YLR438C-A 270 nt12.21□□□□□ -0.45
SNX3Q08826 SUF2tP(AGG)C 72 nt12.18□□□□□ -0.46
SNX3Q08826 SUF10tP(AGG)N 72 nt12.18□□□□□ -0.46
SNX3Q08826 GIS3YLR094C 1509 nt12.16□□□□□ -0.46
SNX3Q08826 ART5YGR068C 1761 nt12.13□□□□□ -0.47
SNX3Q08826 GFD2YCL036W 1701 nt12.13□□□□□ -0.47
SNX3Q08826 PCH2YBR186W 1695 nt12.13□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms