Protein–RNA interactions for Protein: P40416

ATM1, Iron-sulfur clusters transporter ATM1, mitochondrial, yeastyeast

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATM1P40416 YML009W-BYML009W-B 477 nt20.95■□□□□ 0.94
ATM1P40416 NSR1YGR159C 1245 nt20.83■□□□□ 0.93
ATM1P40416 NOP1YDL014W 984 nt20.31■□□□□ 0.84
ATM1P40416 YKL036CYKL036C 393 nt18.75■□□□□ 0.59
ATM1P40416 MDJ1YFL016C 1536 nt18.57■□□□□ 0.56
ATM1P40416 Q0297Q0297 156 nt17.83■□□□□ 0.44
ATM1P40416 SRX1YKL086W 384 nt17.8■□□□□ 0.44
ATM1P40416 YJL027CYJL027C 417 nt17.51■□□□□ 0.39
ATM1P40416 SCS3YGL126W 1143 nt17.09■□□□□ 0.33
ATM1P40416 YCR051WYCR051W 669 nt16.86■□□□□ 0.29
ATM1P40416 DBP2YNL112W 1641 nt16.45■□□□□ 0.22
ATM1P40416 YOL085CYOL085C 342 nt16.27■□□□□ 0.2
ATM1P40416 TRN1tP(UGG)A 72 nt16.12■□□□□ 0.17
ATM1P40416 SUF9tP(UGG)F 72 nt16.12■□□□□ 0.17
ATM1P40416 SUF8tP(UGG)H 72 nt16.12■□□□□ 0.17
ATM1P40416 tP(UGG)LtP(UGG)L 72 nt16.12■□□□□ 0.17
ATM1P40416 SUF7tP(UGG)M 72 nt16.12■□□□□ 0.17
ATM1P40416 tP(UGG)N1tP(UGG)N1 72 nt16.12■□□□□ 0.17
ATM1P40416 tP(UGG)N2tP(UGG)N2 72 nt16.12■□□□□ 0.17
ATM1P40416 tP(UGG)O1tP(UGG)O1 72 nt16.12■□□□□ 0.17
ATM1P40416 SUF11tP(UGG)O2 72 nt16.12■□□□□ 0.17
ATM1P40416 PKP1YIL042C 1185 nt16.04■□□□□ 0.16
ATM1P40416 RPP1BYDL130W 321 nt15.99■□□□□ 0.15
ATM1P40416 CCC1YLR220W 969 nt15.95■□□□□ 0.14
ATM1P40416 YBR190WYBR190W 312 nt15.81■□□□□ 0.12
ATM1P40416 RTC3YHR087W 336 nt15.43■□□□□ 0.06
ATM1P40416 SCJ1YMR214W 1134 nt15.38■□□□□ 0.05
ATM1P40416 RVS167YDR388W 1449 nt15.35■□□□□ 0.05
ATM1P40416 PET122YER153C 765 nt15.31■□□□□ 0.04
ATM1P40416 ATS1YAL020C 1002 nt15.27■□□□□ 0.04
ATM1P40416 tP(UGG)O3tP(UGG)O3 72 nt15.23■□□□□ 0.03
ATM1P40416 SCR1SCR1 522 nt15.06■□□□□ 0
ATM1P40416 SHR5YOL110W 714 nt14.86□□□□□ -0.03
ATM1P40416 RRN5YLR141W 1092 nt14.85□□□□□ -0.03
ATM1P40416 YDJ1YNL064C 1230 nt14.73□□□□□ -0.05
ATM1P40416 YER088W-BYER088W-B 147 nt14.56□□□□□ -0.08
ATM1P40416 RSB1YOR049C 1065 nt14.51□□□□□ -0.09
ATM1P40416 DEP1YAL013W 1218 nt14.47□□□□□ -0.09
ATM1P40416 URN1YPR152C 1398 nt14.47□□□□□ -0.09
ATM1P40416 PUT4YOR348C 1884 nt14.42□□□□□ -0.1
ATM1P40416 GAR1YHR089C 618 nt14.41□□□□□ -0.1
ATM1P40416 OPI9YLR338W 858 nt14.27□□□□□ -0.13
ATM1P40416 YNL208WYNL208W 600 nt14.21□□□□□ -0.13
ATM1P40416 SAH1YER043C 1350 nt14.2□□□□□ -0.14
ATM1P40416 RPN10YHR200W 807 nt14.18□□□□□ -0.14
ATM1P40416 PST2YDR032C 597 nt14.17□□□□□ -0.14
ATM1P40416 ARE1YCR048W 1833 nt14.15□□□□□ -0.14
ATM1P40416 YHR049C-AYHR049C-A 297 nt13.95□□□□□ -0.18
ATM1P40416 POA1YBR022W 534 nt13.94□□□□□ -0.18
ATM1P40416 TIR1YER011W 765 nt13.93□□□□□ -0.18
ATM1P40416 PUN1YLR414C 792 nt13.82□□□□□ -0.2
ATM1P40416 SSA1YAL005C 1929 nt13.81□□□□□ -0.2
ATM1P40416 YJR018WYJR018W 363 nt13.79□□□□□ -0.2
ATM1P40416 PTC2YER089C 1395 nt13.69□□□□□ -0.22
ATM1P40416 YJR120WYJR120W 351 nt13.66□□□□□ -0.22
ATM1P40416 BSC6YOL137W 1494 nt13.65□□□□□ -0.22
ATM1P40416 SRB2YHR041C 633 nt13.63□□□□□ -0.23
ATM1P40416 BUD23YCR047C 828 nt13.6□□□□□ -0.23
ATM1P40416 SHU1YHL006C 453 nt13.6□□□□□ -0.23
ATM1P40416 YKL097CYKL097C 411 nt13.54□□□□□ -0.24
ATM1P40416 SSA3YBL075C 1950 nt13.53□□□□□ -0.24
ATM1P40416 NAB2YGL122C 1578 nt13.49□□□□□ -0.25
ATM1P40416 RPP2BYDR382W 333 nt13.46□□□□□ -0.25
ATM1P40416 YAL037C-BYAL037C-B 975 nt13.41□□□□□ -0.26
ATM1P40416 FIS1YIL065C 468 nt13.36□□□□□ -0.27
ATM1P40416 WWM1YFL010C 636 nt13.34□□□□□ -0.27
ATM1P40416 DAL1YIR027C 1383 nt13.32□□□□□ -0.28
ATM1P40416 INM2YDR287W 879 nt13.28□□□□□ -0.28
ATM1P40416 FPR4YLR449W 1179 nt13.27□□□□□ -0.29
ATM1P40416 BDH2YAL061W 1254 nt13.23□□□□□ -0.29
ATM1P40416 PHO4YFR034C 939 nt13.21□□□□□ -0.29
ATM1P40416 YGR021WYGR021W 873 nt13.2□□□□□ -0.3
ATM1P40416 HOM6YJR139C 1080 nt13.2□□□□□ -0.3
ATM1P40416 YBL100CYBL100C 315 nt13.18□□□□□ -0.3
ATM1P40416 MNP1YGL068W 585 nt13.15□□□□□ -0.3
ATM1P40416 YFL021C-AYFL021C-A 855 nt13.09□□□□□ -0.31
ATM1P40416 SPT5YML010W 3192 nt13.09□□□□□ -0.31
ATM1P40416 YOR139CYOR139C 393 nt13.08□□□□□ -0.32
ATM1P40416 LSM3YLR438C-A 270 nt13.05□□□□□ -0.32
ATM1P40416 FUN26YAL022C 1554 nt13.03□□□□□ -0.32
ATM1P40416 RKM5YLR137W 1104 nt12.99□□□□□ -0.33
ATM1P40416 YPS1YLR120C 1710 nt12.96□□□□□ -0.33
ATM1P40416 TRM9YML014W 840 nt12.96□□□□□ -0.33
ATM1P40416 NPL3YDR432W 1245 nt12.89□□□□□ -0.35
ATM1P40416 YDR095CYDR095C 411 nt12.88□□□□□ -0.35
ATM1P40416 CCT6YDR188W 1641 nt12.87□□□□□ -0.35
ATM1P40416 YOL037CYOL037C 354 nt12.86□□□□□ -0.35
ATM1P40416 MEP2YNL142W 1500 nt12.81□□□□□ -0.36
ATM1P40416 YHR165W-AYHR165W-A 312 nt12.79□□□□□ -0.36
ATM1P40416 ALF1YNL148C 765 nt12.79□□□□□ -0.36
ATM1P40416 SUF2tP(AGG)C 72 nt12.7□□□□□ -0.38
ATM1P40416 SUF10tP(AGG)N 72 nt12.7□□□□□ -0.38
ATM1P40416 SIS1YNL007C 1059 nt12.66□□□□□ -0.38
ATM1P40416 DCW1YKL046C 1350 nt12.65□□□□□ -0.38
ATM1P40416 PTP1YDL230W 1008 nt12.63□□□□□ -0.39
ATM1P40416 RPP2AYOL039W 321 nt12.62□□□□□ -0.39
ATM1P40416 YLR281CYLR281C 468 nt12.61□□□□□ -0.39
ATM1P40416 WHI5YOR083W 888 nt12.56□□□□□ -0.4
ATM1P40416 SSA4YER103W 1929 nt12.56□□□□□ -0.4
ATM1P40416 tM(CAU)CtM(CAU)C 72 nt12.55□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms