RNA–Protein interactions for RNA: YPL217C

BMS1, Transcript of GTPase required for ribosomal subunit synthesis and rRNA processing, yeast

Gene BMS1, Length 3,552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BMS1	YPL217C	PDR11	P40550	1411 aa		4.21	□□□□□ -1.74
BMS1	YPL217C	CDC45	Q08032	650 aa		4.21	□□□□□ -1.74
BMS1	YPL217C	FPR3	P38911	411 aa	Known RBP	4.2	□□□□□ -1.74
BMS1	YPL217C	YRB30	P53107	440 aa	Predicted RBP	4.2	□□□□□ -1.74
BMS1	YPL217C	CTR9	P89105	1077 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	YRF1-1	P0CX20	1796 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	YRF1-5	P0CX21	1796 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	YRF1-8	P0CX22	1796 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	APC1	P53886	1748 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	MNN4	P36044	1178 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	NST1	P53935	1240 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	MSP1	P28737	362 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	YRF1-2	P40105	1681 aa		4.2	□□□□□ -1.74
BMS1	YPL217C	PIL1	P53252	339 aa	Known RBP	4.19	□□□□□ -1.74
BMS1	YPL217C	SPT21	P35209	758 aa		4.18	□□□□□ -1.74
BMS1	YPL217C	BYE1	P36106	594 aa		4.18	□□□□□ -1.74
BMS1	YPL217C	RPN1	P38764	993 aa	Known RBP	4.18	□□□□□ -1.74
BMS1	YPL217C	VPS27	P40343	622 aa	Known RBP	4.18	□□□□□ -1.74
BMS1	YPL217C	RAV1	P47104	1357 aa		4.18	□□□□□ -1.74
BMS1	YPL217C	RVB2	Q12464	471 aa	Known RBP	4.18	□□□□□ -1.74
BMS1	YPL217C	FAP1	P53971	965 aa		4.18	□□□□□ -1.74
BMS1	YPL217C	URB1	P34241	1764 aa	Known RBP	4.18	□□□□□ -1.74
BMS1	YPL217C	UTP10	P42945	1769 aa	Known RBP	4.17	□□□□□ -1.74
BMS1	YPL217C	ROM2	P51862	1356 aa	Known RBP	4.17	□□□□□ -1.74
BMS1	YPL217C	RIX1	P38883	763 aa	Predicted RBP	4.17	□□□□□ -1.74
BMS1	YPL217C	AUS1	Q08409	1394 aa		4.17	□□□□□ -1.74
BMS1	YPL217C	SPC110	P32380	944 aa		4.16	□□□□□ -1.74
BMS1	YPL217C	LEO1	P38439	464 aa		4.16	□□□□□ -1.74
BMS1	YPL217C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
BMS1	YPL217C	VPS4	P52917	437 aa		4.16	□□□□□ -1.74
BMS1	YPL217C	HAP5	Q02516	242 aa		4.16	□□□□□ -1.74
BMS1	YPL217C	KRE33	P53914	1056 aa	Known RBP	4.15	□□□□□ -1.74
BMS1	YPL217C	KIP3	P53086	805 aa	Known RBP	4.14	□□□□□ -1.75
BMS1	YPL217C	CWC22	P53333	577 aa	Known RBP	4.14	□□□□□ -1.75
BMS1	YPL217C	NOP58	Q12499	511 aa	Known RBP	4.14	□□□□□ -1.75
BMS1	YPL217C	RTC1	Q08281	1341 aa		4.14	□□□□□ -1.75
BMS1	YPL217C	SEC7	P11075	2009 aa	Known RBP	4.14	□□□□□ -1.75
BMS1	YPL217C	SIR4	P11978	1358 aa		4.14	□□□□□ -1.75
BMS1	YPL217C	VPS24	P36095	224 aa	Known RBP	4.14	□□□□□ -1.75
BMS1	YPL217C	ENV11	P53246	860 aa		4.14	□□□□□ -1.75
BMS1	YPL217C	SMC3	P47037	1230 aa		4.13	□□□□□ -1.75
BMS1	YPL217C	TEA1	P47988	759 aa		4.13	□□□□□ -1.75
BMS1	YPL217C	NUP145	P49687	1317 aa		4.13	□□□□□ -1.75
BMS1	YPL217C	CIN4	P39110	191 aa		4.13	□□□□□ -1.75
BMS1	YPL217C	YOL087C	Q99247	1116 aa		4.13	□□□□□ -1.75
BMS1	YPL217C	NAP1	P25293	417 aa	Known RBP	4.12	□□□□□ -1.75
BMS1	YPL217C	SUI2	P20459	304 aa	Known RBP	4.12	□□□□□ -1.75
BMS1	YPL217C	SIC1	P38634	284 aa		4.12	□□□□□ -1.75
BMS1	YPL217C	PDS5	Q04264	1277 aa		4.12	□□□□□ -1.75
BMS1	YPL217C	RAD9	P14737	1309 aa		4.12	□□□□□ -1.75
BMS1	YPL217C	SRP54	P20424	541 aa	Known RBP	4.11	□□□□□ -1.75
BMS1	YPL217C	MPE1	P35728	441 aa	Known RBP	4.11	□□□□□ -1.75
BMS1	YPL217C	RRT14	P40470	206 aa		4.1	□□□□□ -1.75
BMS1	YPL217C	PLP2	Q12017	286 aa		4.1	□□□□□ -1.75
BMS1	YPL217C	NOP14	Q99207	810 aa	Known RBP	4.1	□□□□□ -1.75
BMS1	YPL217C	MED8	P38304	223 aa		4.1	□□□□□ -1.75
BMS1	YPL217C	VPS72	Q03388	795 aa		4.1	□□□□□ -1.75
BMS1	YPL217C	IFH1	P39520	1085 aa		4.09	□□□□□ -1.75
BMS1	YPL217C	DJP1	P40564	432 aa		4.09	□□□□□ -1.75
BMS1	YPL217C	ARL1	P38116	183 aa	Known RBP	4.09	□□□□□ -1.76
BMS1	YPL217C	BCK1	Q01389	1478 aa		4.08	□□□□□ -1.76
BMS1	YPL217C	LEU3	P08638	886 aa		4.08	□□□□□ -1.76
BMS1	YPL217C	YEF3	P16521	1044 aa	Known RBP	4.08	□□□□□ -1.76
BMS1	YPL217C	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
BMS1	YPL217C	FUN12	P39730	1002 aa	Known RBP	4.08	□□□□□ -1.76
BMS1	YPL217C	BMS1	Q08965	1183 aa	Known RBP	4.08	□□□□□ -1.76
BMS1	YPL217C	DRS2	P39524	1355 aa		4.07	□□□□□ -1.76
BMS1	YPL217C	MSH1	P25846	959 aa		4.07	□□□□□ -1.76
BMS1	YPL217C	RKM3	P38222	552 aa		4.07	□□□□□ -1.76
BMS1	YPL217C	DIP2	Q12220	943 aa	Predicted RBP	4.07	□□□□□ -1.76
BMS1	YPL217C	KRE5	P22023	1365 aa		4.07	□□□□□ -1.76
BMS1	YPL217C	HYR1	P40581	163 aa	Known RBP	4.07	□□□□□ -1.76
BMS1	YPL217C	RAD26	P40352	1085 aa		4.07	□□□□□ -1.76
BMS1	YPL217C	NMD2	P38798	1089 aa	Known RBP	4.06	□□□□□ -1.76
BMS1	YPL217C	BDH2	P39713	417 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	YPP1	P46951	817 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	AIM44	Q99299	758 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	PSK1	P31374	1356 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	YIL092W	P40497	633 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	CIR1	P42940	261 aa		4.06	□□□□□ -1.76
BMS1	YPL217C	TCD1	P38756	429 aa		4.05	□□□□□ -1.76
BMS1	YPL217C	LCD1	Q04377	747 aa		4.05	□□□□□ -1.76
BMS1	YPL217C	FPR4	Q06205	392 aa	Predicted RBP	4.05	□□□□□ -1.76
BMS1	YPL217C	YIL177C	P40434	1758 aa		4.05	□□□□□ -1.76
BMS1	YPL217C	YJL225C	P40889	1758 aa		4.05	□□□□□ -1.76
BMS1	YPL217C	STU2	P46675	888 aa		4.04	□□□□□ -1.76
BMS1	YPL217C	KRI1	P42846	591 aa	Known RBP	4.04	□□□□□ -1.76
BMS1	YPL217C	RRP46	P53256	223 aa	Predicted RBP	4.04	□□□□□ -1.76
BMS1	YPL217C	NOP7	P53261	605 aa	Known RBP	4.04	□□□□□ -1.76
BMS1	YPL217C	HEF3	P53978	1044 aa	Known RBP	4.04	□□□□□ -1.76
BMS1	YPL217C	LYS2	P07702	1392 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	PBY1	P38254	753 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
BMS1	YPL217C	BNR1	P40450	1375 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	LTV1	P34078	463 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	CEP3	P40969	608 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	YNL011C	P53980	444 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	HOS3	Q02959	697 aa	Known RBP	4.03	□□□□□ -1.76
BMS1	YPL217C	SWI3	P32591	825 aa		4.03	□□□□□ -1.76
BMS1	YPL217C	POL32	P47110	350 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms