Protein–RNA interactions for Protein: P42940

CIR1, Probable electron transfer flavoprotein subunit beta, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIR1P42940 NSR1YGR159C 1245 nt23.01■■□□□ 1.27
CIR1P42940 YML009W-BYML009W-B 477 nt22.84■■□□□ 1.25
CIR1P42940 NOP1YDL014W 984 nt21.89■■□□□ 1.09
CIR1P42940 MDJ1YFL016C 1536 nt21.01■□□□□ 0.95
CIR1P42940 YKL036CYKL036C 393 nt19.84■□□□□ 0.77
CIR1P42940 YJL027CYJL027C 417 nt19.24■□□□□ 0.67
CIR1P42940 SRX1YKL086W 384 nt19.19■□□□□ 0.66
CIR1P42940 Q0297Q0297 156 nt19.07■□□□□ 0.64
CIR1P42940 DBP2YNL112W 1641 nt18.41■□□□□ 0.54
CIR1P42940 YCR051WYCR051W 669 nt18.22■□□□□ 0.51
CIR1P42940 YBR190WYBR190W 312 nt17.9■□□□□ 0.46
CIR1P42940 SCS3YGL126W 1143 nt17.88■□□□□ 0.45
CIR1P42940 TRN1tP(UGG)A 72 nt17.65■□□□□ 0.42
CIR1P42940 SUF9tP(UGG)F 72 nt17.65■□□□□ 0.42
CIR1P42940 SUF8tP(UGG)H 72 nt17.65■□□□□ 0.42
CIR1P42940 tP(UGG)LtP(UGG)L 72 nt17.65■□□□□ 0.42
CIR1P42940 SUF7tP(UGG)M 72 nt17.65■□□□□ 0.42
CIR1P42940 tP(UGG)N1tP(UGG)N1 72 nt17.65■□□□□ 0.42
CIR1P42940 tP(UGG)N2tP(UGG)N2 72 nt17.65■□□□□ 0.42
CIR1P42940 tP(UGG)O1tP(UGG)O1 72 nt17.65■□□□□ 0.42
CIR1P42940 SUF11tP(UGG)O2 72 nt17.65■□□□□ 0.42
CIR1P42940 RTC3YHR087W 336 nt17.54■□□□□ 0.4
CIR1P42940 CCC1YLR220W 969 nt17.54■□□□□ 0.4
CIR1P42940 YOL085CYOL085C 342 nt17.25■□□□□ 0.35
CIR1P42940 PKP1YIL042C 1185 nt17.14■□□□□ 0.33
CIR1P42940 RPP1BYDL130W 321 nt17.12■□□□□ 0.33
CIR1P42940 RVS167YDR388W 1449 nt17.04■□□□□ 0.32
CIR1P42940 SCJ1YMR214W 1134 nt17.03■□□□□ 0.32
CIR1P42940 SSA3YBL075C 1950 nt16.7■□□□□ 0.26
CIR1P42940 PUT4YOR348C 1884 nt16.69■□□□□ 0.26
CIR1P42940 tP(UGG)O3tP(UGG)O3 72 nt16.56■□□□□ 0.24
CIR1P42940 PET122YER153C 765 nt16.49■□□□□ 0.23
CIR1P42940 SHR5YOL110W 714 nt16.38■□□□□ 0.21
CIR1P42940 ARE1YCR048W 1833 nt16.27■□□□□ 0.2
CIR1P42940 URN1YPR152C 1398 nt16.26■□□□□ 0.19
CIR1P42940 DEP1YAL013W 1218 nt16.21■□□□□ 0.19
CIR1P42940 SAH1YER043C 1350 nt16.18■□□□□ 0.18
CIR1P42940 POA1YBR022W 534 nt16.17■□□□□ 0.18
CIR1P42940 OPI9YLR338W 858 nt16.08■□□□□ 0.16
CIR1P42940 SCR1SCR1 522 nt16.06■□□□□ 0.16
CIR1P42940 YHR049C-AYHR049C-A 297 nt16.05■□□□□ 0.16
CIR1P42940 RRN5YLR141W 1092 nt15.96■□□□□ 0.15
CIR1P42940 YDJ1YNL064C 1230 nt15.95■□□□□ 0.14
CIR1P42940 BSC6YOL137W 1494 nt15.88■□□□□ 0.13
CIR1P42940 ATS1YAL020C 1002 nt15.85■□□□□ 0.13
CIR1P42940 GAR1YHR089C 618 nt15.78■□□□□ 0.12
CIR1P42940 RPN10YHR200W 807 nt15.78■□□□□ 0.12
CIR1P42940 YNL208WYNL208W 600 nt15.76■□□□□ 0.11
CIR1P42940 BUD23YCR047C 828 nt15.65■□□□□ 0.1
CIR1P42940 YER088W-BYER088W-B 147 nt15.64■□□□□ 0.09
CIR1P42940 PUN1YLR414C 792 nt15.56■□□□□ 0.08
CIR1P42940 PTC2YER089C 1395 nt15.55■□□□□ 0.08
CIR1P42940 SPT5YML010W 3192 nt15.5■□□□□ 0.07
CIR1P42940 RSB1YOR049C 1065 nt15.48■□□□□ 0.07
CIR1P42940 YJR018WYJR018W 363 nt15.47■□□□□ 0.07
CIR1P42940 NAB2YGL122C 1578 nt15.34■□□□□ 0.05
CIR1P42940 YJR120WYJR120W 351 nt15.23■□□□□ 0.03
CIR1P42940 TIR1YER011W 765 nt15.22■□□□□ 0.03
CIR1P42940 SSA1YAL005C 1929 nt15.2■□□□□ 0.02
CIR1P42940 SSA4YER103W 1929 nt15.14■□□□□ 0.01
CIR1P42940 FIS1YIL065C 468 nt15.14■□□□□ 0.01
CIR1P42940 FPR4YLR449W 1179 nt15.09■□□□□ 0.01
CIR1P42940 DAL1YIR027C 1383 nt15.06■□□□□ 0
CIR1P42940 SRB2YHR041C 633 nt14.98□□□□□ -0.01
CIR1P42940 PHO4YFR034C 939 nt14.96□□□□□ -0.01
CIR1P42940 RPP2BYDR382W 333 nt14.95□□□□□ -0.02
CIR1P42940 MEP2YNL142W 1500 nt14.92□□□□□ -0.02
CIR1P42940 INM2YDR287W 879 nt14.91□□□□□ -0.02
CIR1P42940 YPS1YLR120C 1710 nt14.83□□□□□ -0.04
CIR1P42940 DCW1YKL046C 1350 nt14.78□□□□□ -0.04
CIR1P42940 PST2YDR032C 597 nt14.76□□□□□ -0.05
CIR1P42940 YBL100CYBL100C 315 nt14.75□□□□□ -0.05
CIR1P42940 YHR165W-AYHR165W-A 312 nt14.68□□□□□ -0.06
CIR1P42940 YDR095CYDR095C 411 nt14.64□□□□□ -0.07
CIR1P42940 BDH2YAL061W 1254 nt14.62□□□□□ -0.07
CIR1P42940 BDF1YLR399C 2061 nt14.61□□□□□ -0.07
CIR1P42940 FUN26YAL022C 1554 nt14.58□□□□□ -0.08
CIR1P42940 WWM1YFL010C 636 nt14.55□□□□□ -0.08
CIR1P42940 EMI2YDR516C 1503 nt14.5□□□□□ -0.09
CIR1P42940 CAC2YML102W 1407 nt14.45□□□□□ -0.1
CIR1P42940 PTP1YDL230W 1008 nt14.44□□□□□ -0.1
CIR1P42940 TRM9YML014W 840 nt14.42□□□□□ -0.1
CIR1P42940 ALF1YNL148C 765 nt14.41□□□□□ -0.1
CIR1P42940 YBR220CYBR220C 1683 nt14.39□□□□□ -0.11
CIR1P42940 TAT1YBR069C 1860 nt14.38□□□□□ -0.11
CIR1P42940 RPP2AYOL039W 321 nt14.36□□□□□ -0.11
CIR1P42940 YDL221WYDL221W 552 nt14.33□□□□□ -0.12
CIR1P42940 SHU1YHL006C 453 nt14.32□□□□□ -0.12
CIR1P42940 YAL037C-BYAL037C-B 975 nt14.32□□□□□ -0.12
CIR1P42940 YMR090WYMR090W 684 nt14.31□□□□□ -0.12
CIR1P42940 LSM3YLR438C-A 270 nt14.3□□□□□ -0.12
CIR1P42940 CCT6YDR188W 1641 nt14.3□□□□□ -0.12
CIR1P42940 SDH1YKL148C 1923 nt14.25□□□□□ -0.13
CIR1P42940 SIS1YNL007C 1059 nt14.24□□□□□ -0.13
CIR1P42940 YFL021C-AYFL021C-A 855 nt14.2□□□□□ -0.14
CIR1P42940 IRC15YPL017C 1500 nt14.2□□□□□ -0.14
CIR1P42940 HOM6YJR139C 1080 nt14.19□□□□□ -0.14
CIR1P42940 YGR021WYGR021W 873 nt14.16□□□□□ -0.14
CIR1P42940 SUF2tP(AGG)C 72 nt14.14□□□□□ -0.15
CIR1P42940 SUF10tP(AGG)N 72 nt14.14□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms