RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C OPY1P38271 328 aa5.42□□□□□ -1.54
GDE1YPL110C YMR196WQ04336 1088 aa5.42□□□□□ -1.54
GDE1YPL110C TOP2P06786 1428 aaKnown RBP5.41□□□□□ -1.54
GDE1YPL110C NNF2P53253 936 aa5.41□□□□□ -1.54
GDE1YPL110C DOP1Q03921 1698 aa5.4□□□□□ -1.54
GDE1YPL110C SNT2P53127 1403 aa5.4□□□□□ -1.55
GDE1YPL110C MSH4P40965 878 aaPredicted RBP5.39□□□□□ -1.55
GDE1YPL110C IQG1Q12280 1495 aa5.39□□□□□ -1.55
GDE1YPL110C LAM6Q08001 693 aa5.38□□□□□ -1.55
GDE1YPL110C RIM101P33400 625 aa5.38□□□□□ -1.55
GDE1YPL110C CHZ1P40019 153 aaPredicted RBP5.38□□□□□ -1.55
GDE1YPL110C SNQ2P32568 1501 aaKnown RBP5.38□□□□□ -1.55
GDE1YPL110C PRS1P32895 427 aaKnown RBP5.37□□□□□ -1.55
GDE1YPL110C PAF1P38351 445 aa5.37□□□□□ -1.55
GDE1YPL110C SRP54P20424 541 aaKnown RBP5.37□□□□□ -1.55
GDE1YPL110C ASF1P32447 279 aa5.37□□□□□ -1.55
GDE1YPL110C RRP15Q06511 250 aaPredicted RBP5.37□□□□□ -1.55
GDE1YPL110C MRX12P47084 519 aa5.36□□□□□ -1.55
GDE1YPL110C HSC82P15108 705 aaKnown RBP5.36□□□□□ -1.55
GDE1YPL110C NAB3P38996 802 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
GDE1YPL110C HOS4P40480 1083 aa5.36□□□□□ -1.55
GDE1YPL110C SMC3P47037 1230 aa5.36□□□□□ -1.55
GDE1YPL110C RTS3P53289 263 aa5.36□□□□□ -1.55
GDE1YPL110C LTV1P34078 463 aa5.36□□□□□ -1.55
GDE1YPL110C SNF7P39929 240 aaKnown RBP5.35□□□□□ -1.55
GDE1YPL110C VID30P53076 958 aa5.35□□□□□ -1.55
GDE1YPL110C FAR11P53917 953 aa5.35□□□□□ -1.55
GDE1YPL110C CFT2Q12102 859 aaPredicted RBP5.35□□□□□ -1.55
GDE1YPL110C ALD3P54114 506 aa5.35□□□□□ -1.55
GDE1YPL110C MSH3P25336 1018 aa5.35□□□□□ -1.55
GDE1YPL110C SLX8P40072 274 aa5.34□□□□□ -1.55
GDE1YPL110C KIP3P53086 805 aaKnown RBP5.34□□□□□ -1.55
GDE1YPL110C TPO2P53283 614 aa5.34□□□□□ -1.55
GDE1YPL110C CTR9P89105 1077 aa5.34□□□□□ -1.55
GDE1YPL110C RPN7Q06103 429 aaKnown RBP5.34□□□□□ -1.55
GDE1YPL110C MET5P47169 1442 aa5.34□□□□□ -1.55
GDE1YPL110C PAM1P37304 830 aaKnown RBP5.34□□□□□ -1.56
GDE1YPL110C MTR4P47047 1073 aaKnown RBP5.34□□□□□ -1.56
GDE1YPL110C RSC8P43609 557 aaKnown RBP5.33□□□□□ -1.56
GDE1YPL110C PRP3Q03338 469 aaPredicted RBP5.33□□□□□ -1.56
GDE1YPL110C ECM16Q04217 1267 aaKnown RBP5.33□□□□□ -1.56
GDE1YPL110C MAM3Q12296 706 aa5.33□□□□□ -1.56
GDE1YPL110C SPP41P38904 1435 aa5.33□□□□□ -1.56
GDE1YPL110C TY3B-GQ99315 1547 aa5.33□□□□□ -1.56
GDE1YPL110C MCM1P11746 286 aa5.33□□□□□ -1.56
GDE1YPL110C DOS2P54858 310 aa5.32□□□□□ -1.56
GDE1YPL110C CBF5P33322 483 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
GDE1YPL110C ISW1P38144 1129 aa5.32□□□□□ -1.56
GDE1YPL110C YLL054CQ12244 843 aa5.32□□□□□ -1.56
GDE1YPL110C GDB1Q06625 1536 aa5.32□□□□□ -1.56
GDE1YPL110C AIM21P40563 679 aa5.32□□□□□ -1.56
GDE1YPL110C ERV41Q04651 352 aa5.32□□□□□ -1.56
GDE1YPL110C YVC1Q12324 675 aa5.32□□□□□ -1.56
GDE1YPL110C VPS15P22219 1454 aa5.31□□□□□ -1.56
GDE1YPL110C CLN1P20437 546 aa5.3□□□□□ -1.56
GDE1YPL110C RRP14P36080 434 aaKnown RBP5.3□□□□□ -1.56
GDE1YPL110C LEM3P42838 414 aa5.3□□□□□ -1.56
GDE1YPL110C BUD21Q08492 214 aaPredicted RBP5.3□□□□□ -1.56
GDE1YPL110C RAD51P25454 400 aa5.3□□□□□ -1.56
GDE1YPL110C EAF7P53911 425 aaKnown RBP5.3□□□□□ -1.56
GDE1YPL110C SPC42P36094 363 aa5.29□□□□□ -1.56
GDE1YPL110C RPT2P40327 437 aaKnown RBP5.29□□□□□ -1.56
GDE1YPL110C MMS1Q06211 1407 aa5.29□□□□□ -1.56
GDE1YPL110C GGA1Q06336 557 aa5.29□□□□□ -1.56
GDE1YPL110C NOP58Q12499 511 aaKnown RBP5.29□□□□□ -1.56
GDE1YPL110C TY1B-AO13527 1196 aaKnown RBP5.29□□□□□ -1.56
GDE1YPL110C BNI1P41832 1953 aa5.29□□□□□ -1.56
GDE1YPL110C RPC82P32349 654 aa5.28□□□□□ -1.56
GDE1YPL110C NPR3P38742 1146 aa5.28□□□□□ -1.56
GDE1YPL110C SWI3P32591 825 aa5.28□□□□□ -1.56
GDE1YPL110C GEF1P37020 779 aa5.28□□□□□ -1.56
GDE1YPL110C AIM20P40451 204 aa5.28□□□□□ -1.56
GDE1YPL110C YDR341CQ05506 607 aaKnown RBP5.28□□□□□ -1.56
GDE1YPL110C TAF13P11747 167 aa5.28□□□□□ -1.56
GDE1YPL110C YMR124WP39523 943 aaKnown RBP5.28□□□□□ -1.56
GDE1YPL110C RAD26P40352 1085 aa5.28□□□□□ -1.56
GDE1YPL110C OXP1P28273 1286 aa5.27□□□□□ -1.57
GDE1YPL110C SEC20P28791 383 aa5.27□□□□□ -1.57
GDE1YPL110C YJR008WP47085 338 aa5.27□□□□□ -1.57
GDE1YPL110C EDE1P34216 1381 aa5.27□□□□□ -1.57
GDE1YPL110C DNF1P32660 1571 aa5.27□□□□□ -1.57
GDE1YPL110C DAL5P15365 543 aa5.27□□□□□ -1.57
GDE1YPL110C ORM2Q06144 216 aa5.27□□□□□ -1.57
GDE1YPL110C YOR389WQ08912 624 aa5.27□□□□□ -1.57
GDE1YPL110C BMS1Q08965 1183 aaKnown RBP5.27□□□□□ -1.57
GDE1YPL110C NFI1Q12216 726 aa5.27□□□□□ -1.57
GDE1YPL110C BUD3P25558 1636 aa5.27□□□□□ -1.57
GDE1YPL110C SEC9P40357 651 aa5.27□□□□□ -1.57
GDE1YPL110C YLR419WQ06698 1435 aaKnown RBP5.26□□□□□ -1.57
GDE1YPL110C TY4B-PA0A0B7P3V8 1104 aa5.26□□□□□ -1.57
GDE1YPL110C SUP35P05453 685 aaKnown RBP5.26□□□□□ -1.57
GDE1YPL110C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
GDE1YPL110C YLR271WQ06152 274 aa5.26□□□□□ -1.57
GDE1YPL110C SUB2Q07478 446 aaKnown RBP5.26□□□□□ -1.57
GDE1YPL110C SRB8P25648 1427 aa5.26□□□□□ -1.57
GDE1YPL110C KIN1P13185 1064 aa5.26□□□□□ -1.57
GDE1YPL110C YIR014WP40570 242 aa5.26□□□□□ -1.57
GDE1YPL110C OCA5P38738 679 aa5.26□□□□□ -1.57
GDE1YPL110C RCF1Q03713 159 aa5.26□□□□□ -1.57
GDE1YPL110C GCN2P15442 1659 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms