RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C DRS1P32892 752 aaKnown RBP7.53□□□□□ -1.2
GDE1YPL110C RQC2Q12532 1038 aaKnown RBP7.34□□□□□ -1.23
GDE1YPL110C TFA1P36100 482 aa7.31□□□□□ -1.24
GDE1YPL110C BFR2Q06631 534 aaKnown RBP7.28□□□□□ -1.24
GDE1YPL110C TAF7Q05021 590 aa6.98□□□□□ -1.29
GDE1YPL110C TY1B-DR4Q07793 1604 aa6.91□□□□□ -1.3
GDE1YPL110C INO80P53115 1489 aa6.8□□□□□ -1.32
GDE1YPL110C MON2P48563 1636 aaPredicted RBP6.78□□□□□ -1.32
GDE1YPL110C URN1Q06525 465 aaKnown RBP6.77□□□□□ -1.33
GDE1YPL110C MTC1P47018 478 aaKnown RBP6.63□□□□□ -1.35
GDE1YPL110C TCB3Q03640 1545 aaKnown RBP6.54□□□□□ -1.36
GDE1YPL110C EBP2P36049 427 aaKnown RBP6.48□□□□□ -1.37
GDE1YPL110C SIS2P36024 562 aa6.46□□□□□ -1.38
GDE1YPL110C AVT3P36062 692 aa6.46□□□□□ -1.38
GDE1YPL110C SIN3P22579 1536 aa6.44□□□□□ -1.38
GDE1YPL110C NOP2P40991 618 aaKnown RBP6.41□□□□□ -1.38
GDE1YPL110C SPA2P23201 1466 aaKnown RBP6.4□□□□□ -1.38
GDE1YPL110C SSK2P53599 1579 aa6.4□□□□□ -1.39
GDE1YPL110C CAB3P36076 571 aa6.38□□□□□ -1.39
GDE1YPL110C LEO1P38439 464 aa6.33□□□□□ -1.4
GDE1YPL110C DMA1P38823 416 aa6.32□□□□□ -1.4
GDE1YPL110C THO2P53552 1597 aaKnown RBP6.26□□□□□ -1.41
GDE1YPL110C SWR1Q05471 1514 aa6.25□□□□□ -1.41
GDE1YPL110C YFR016CP43597 1233 aaKnown RBP6.2□□□□□ -1.42
GDE1YPL110C XRN1P22147 1528 aaKnown RBP6.19□□□□□ -1.42
GDE1YPL110C HSL1P34244 1518 aa6.16□□□□□ -1.42
GDE1YPL110C YRB30P53107 440 aaPredicted RBP6.16□□□□□ -1.42
GDE1YPL110C RPS0BP46654 252 aaKnown RBP6.14□□□□□ -1.43
GDE1YPL110C PEP1P32319 1579 aa6.13□□□□□ -1.43
GDE1YPL110C DIP2Q12220 943 aaPredicted RBP6.12□□□□□ -1.43
GDE1YPL110C SPT6P23615 1451 aaKnown RBP6.11□□□□□ -1.43
GDE1YPL110C ATG2P53855 1592 aa6.05□□□□□ -1.44
GDE1YPL110C NSR1P27476 414 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
GDE1YPL110C HIR3P47171 1648 aa6.03□□□□□ -1.44
GDE1YPL110C KOG1P38873 1557 aa6.01□□□□□ -1.45
GDE1YPL110C SSN2P38931 1420 aa6.01□□□□□ -1.45
GDE1YPL110C KRI1P42846 591 aaKnown RBP6.01□□□□□ -1.45
GDE1YPL110C IFH1P39520 1085 aa6□□□□□ -1.45
GDE1YPL110C CHD1P32657 1468 aa5.99□□□□□ -1.45
GDE1YPL110C NAP1P25293 417 aaKnown RBP5.99□□□□□ -1.45
GDE1YPL110C SKI3P17883 1432 aaKnown RBP5.98□□□□□ -1.45
GDE1YPL110C YPR148CQ06523 435 aa5.98□□□□□ -1.45
GDE1YPL110C ABP1P15891 592 aaKnown RBP5.98□□□□□ -1.45
GDE1YPL110C IOC4Q04213 475 aa5.98□□□□□ -1.45
GDE1YPL110C ESP1Q03018 1630 aa5.97□□□□□ -1.45
GDE1YPL110C SGS1P35187 1447 aa5.96□□□□□ -1.46
GDE1YPL110C TY1B-BRQ12193 1756 aa5.95□□□□□ -1.46
GDE1YPL110C TY1B-GR3Q12316 1755 aa5.95□□□□□ -1.46
GDE1YPL110C TY1B-ORQ92393 1755 aa5.95□□□□□ -1.46
GDE1YPL110C AIM44Q99299 758 aa5.94□□□□□ -1.46
GDE1YPL110C LEU3P08638 886 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-HO13535 1793 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-DR5P0C2I2 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-DR6P0C2I3 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-LR2P0C2I5 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-LR3P0C2I6 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-PR1P0C2I9 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-PR2P0C2J0 1756 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-PR3P0C2J1 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-JR1P47098 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-ML2Q03434 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-ER1Q03612 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-ML1Q04711 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-GR2Q12269 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-OLQ12273 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-PLQ12414 1755 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY1B-DR3Q99231 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-LR1P0C2J3 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-FP0CX63 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-GR2P0CX64 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-CP25384 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-DR2Q03494 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY1B-DR1Q03855 1755 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-DR3Q07791 1770 aaKnown RBP5.93□□□□□ -1.46
GDE1YPL110C TY2B-OR1Q12113 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-DR1Q12472 1770 aa5.93□□□□□ -1.46
GDE1YPL110C TY2B-OR2Q12501 1770 aa5.93□□□□□ -1.46
GDE1YPL110C MNN4P36044 1178 aa5.92□□□□□ -1.46
GDE1YPL110C MYO2P19524 1574 aaKnown RBP5.91□□□□□ -1.46
GDE1YPL110C ORC1P54784 914 aaPredicted RBP5.91□□□□□ -1.46
GDE1YPL110C TCB2P48231 1178 aa5.9□□□□□ -1.47
GDE1YPL110C RLF2Q12495 606 aa5.88□□□□□ -1.47
GDE1YPL110C TY2B-BQ12491 1770 aa5.88□□□□□ -1.47
GDE1YPL110C CWC22P53333 577 aaKnown RBP5.86□□□□□ -1.47
GDE1YPL110C NOP53Q12080 455 aaKnown RBP5.85□□□□□ -1.47
GDE1YPL110C SAS10Q12136 610 aaPredicted RBP5.84□□□□□ -1.47
GDE1YPL110C PDR10P51533 1564 aa5.82□□□□□ -1.48
GDE1YPL110C NUG1P40010 520 aaKnown RBP5.8□□□□□ -1.48
GDE1YPL110C REV3P14284 1504 aa5.8□□□□□ -1.48
GDE1YPL110C RSE1Q04693 1361 aaKnown RBP5.79□□□□□ -1.48
GDE1YPL110C DEF1P35732 738 aaKnown RBP5.79□□□□□ -1.48
GDE1YPL110C DMA2P53924 522 aa5.79□□□□□ -1.48
GDE1YPL110C ECM5Q03214 1411 aa5.79□□□□□ -1.48
GDE1YPL110C YPK9Q12697 1472 aa5.79□□□□□ -1.48
GDE1YPL110C PLP2Q12017 286 aa5.78□□□□□ -1.48
GDE1YPL110C HAP1P0CE41 1502 aa5.77□□□□□ -1.49
GDE1YPL110C NUP170P38181 1502 aa5.77□□□□□ -1.49
GDE1YPL110C SNU71P53207 620 aaKnown RBP5.76□□□□□ -1.49
GDE1YPL110C ENV11P53246 860 aa5.76□□□□□ -1.49
GDE1YPL110C TY1B-JR2P47100 1755 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms