Protein–RNA interactions for Protein: Q03713

RCF1, Respiratory supercomplex factor 1, mitochondrial, yeastyeast

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCF1Q03713 NSR1YGR159C 1245 nt18.08■□□□□ 0.48
RCF1Q03713 YML009W-BYML009W-B 477 nt17.81■□□□□ 0.44
RCF1Q03713 NOP1YDL014W 984 nt17.07■□□□□ 0.32
RCF1Q03713 MDJ1YFL016C 1536 nt16.64■□□□□ 0.25
RCF1Q03713 YJL027CYJL027C 417 nt15.33■□□□□ 0.04
RCF1Q03713 YKL036CYKL036C 393 nt15.21■□□□□ 0.03
RCF1Q03713 SSA3YBL075C 1950 nt15.12■□□□□ 0.01
RCF1Q03713 SRX1YKL086W 384 nt14.86□□□□□ -0.03
RCF1Q03713 Q0297Q0297 156 nt14.67□□□□□ -0.06
RCF1Q03713 DBP2YNL112W 1641 nt14.38□□□□□ -0.11
RCF1Q03713 YBR190WYBR190W 312 nt14.38□□□□□ -0.11
RCF1Q03713 YCR051WYCR051W 669 nt14.15□□□□□ -0.14
RCF1Q03713 RTC3YHR087W 336 nt14.06□□□□□ -0.16
RCF1Q03713 TRN1tP(UGG)A 72 nt13.75□□□□□ -0.21
RCF1Q03713 SUF9tP(UGG)F 72 nt13.75□□□□□ -0.21
RCF1Q03713 SUF8tP(UGG)H 72 nt13.75□□□□□ -0.21
RCF1Q03713 tP(UGG)LtP(UGG)L 72 nt13.75□□□□□ -0.21
RCF1Q03713 SUF7tP(UGG)M 72 nt13.75□□□□□ -0.21
RCF1Q03713 tP(UGG)N1tP(UGG)N1 72 nt13.75□□□□□ -0.21
RCF1Q03713 tP(UGG)N2tP(UGG)N2 72 nt13.75□□□□□ -0.21
RCF1Q03713 tP(UGG)O1tP(UGG)O1 72 nt13.75□□□□□ -0.21
RCF1Q03713 SUF11tP(UGG)O2 72 nt13.75□□□□□ -0.21
RCF1Q03713 CCC1YLR220W 969 nt13.71□□□□□ -0.21
RCF1Q03713 Q0182Q0182 405 nt13.57□□□□□ -0.24
RCF1Q03713 PUT4YOR348C 1884 nt13.57□□□□□ -0.24
RCF1Q03713 RVS167YDR388W 1449 nt13.56□□□□□ -0.24
RCF1Q03713 SCS3YGL126W 1143 nt13.54□□□□□ -0.24
RCF1Q03713 SSA1YAL005C 1929 nt13.54□□□□□ -0.24
RCF1Q03713 FPS1YLL043W 2010 nt13.42□□□□□ -0.26
RCF1Q03713 SCJ1YMR214W 1134 nt13.28□□□□□ -0.28
RCF1Q03713 NVJ2YPR091C 2313 nt13.26□□□□□ -0.29
RCF1Q03713 RPP1BYDL130W 321 nt13.2□□□□□ -0.3
RCF1Q03713 YOL085CYOL085C 342 nt13.15□□□□□ -0.3
RCF1Q03713 PAC11YDR488C 1602 nt13.12□□□□□ -0.31
RCF1Q03713 PKP1YIL042C 1185 nt13.1□□□□□ -0.31
RCF1Q03713 POA1YBR022W 534 nt13.07□□□□□ -0.32
RCF1Q03713 ARE1YCR048W 1833 nt13.06□□□□□ -0.32
RCF1Q03713 BSC6YOL137W 1494 nt12.94□□□□□ -0.34
RCF1Q03713 YHR049C-AYHR049C-A 297 nt12.91□□□□□ -0.34
RCF1Q03713 SPT5YML010W 3192 nt12.89□□□□□ -0.35
RCF1Q03713 SHR5YOL110W 714 nt12.89□□□□□ -0.35
RCF1Q03713 URN1YPR152C 1398 nt12.89□□□□□ -0.35
RCF1Q03713 SSA4YER103W 1929 nt12.88□□□□□ -0.35
RCF1Q03713 SAH1YER043C 1350 nt12.86□□□□□ -0.35
RCF1Q03713 tP(UGG)O3tP(UGG)O3 72 nt12.84□□□□□ -0.35
RCF1Q03713 OPI9YLR338W 858 nt12.78□□□□□ -0.36
RCF1Q03713 DEP1YAL013W 1218 nt12.77□□□□□ -0.37
RCF1Q03713 PET122YER153C 765 nt12.69□□□□□ -0.38
RCF1Q03713 RPN10YHR200W 807 nt12.61□□□□□ -0.39
RCF1Q03713 MOT3YMR070W 1473 nt12.59□□□□□ -0.39
RCF1Q03713 BUD23YCR047C 828 nt12.59□□□□□ -0.39
RCF1Q03713 YNL208WYNL208W 600 nt12.46□□□□□ -0.41
RCF1Q03713 SCR1SCR1 522 nt12.46□□□□□ -0.41
RCF1Q03713 PUN1YLR414C 792 nt12.45□□□□□ -0.42
RCF1Q03713 BDF1YLR399C 2061 nt12.44□□□□□ -0.42
RCF1Q03713 YDJ1YNL064C 1230 nt12.4□□□□□ -0.42
RCF1Q03713 PTC2YER089C 1395 nt12.39□□□□□ -0.43
RCF1Q03713 NAB2YGL122C 1578 nt12.37□□□□□ -0.43
RCF1Q03713 YJL225CYJL225C 5277 nt12.33□□□□□ -0.44
RCF1Q03713 GAR1YHR089C 618 nt12.29□□□□□ -0.44
RCF1Q03713 TAT1YBR069C 1860 nt12.28□□□□□ -0.44
RCF1Q03713 MEP2YNL142W 1500 nt12.27□□□□□ -0.44
RCF1Q03713 YJR018WYJR018W 363 nt12.26□□□□□ -0.45
RCF1Q03713 RRN5YLR141W 1092 nt12.26□□□□□ -0.45
RCF1Q03713 UME6YDR207C 2511 nt12.14□□□□□ -0.47
RCF1Q03713 FPR4YLR449W 1179 nt12.08□□□□□ -0.48
RCF1Q03713 FIS1YIL065C 468 nt12.03□□□□□ -0.48
RCF1Q03713 DAL1YIR027C 1383 nt12.03□□□□□ -0.48
RCF1Q03713 YER088W-BYER088W-B 147 nt12□□□□□ -0.49
RCF1Q03713 YMR090WYMR090W 684 nt12□□□□□ -0.49
RCF1Q03713 RDN37-1RDN37-1 5354 nt11.99□□□□□ -0.49
RCF1Q03713 RDN37-2RDN37-2 5354 nt11.99□□□□□ -0.49
RCF1Q03713 DCW1YKL046C 1350 nt11.95□□□□□ -0.5
RCF1Q03713 RPM1RPM1 483 nt11.95□□□□□ -0.5
RCF1Q03713 YPS1YLR120C 1710 nt11.94□□□□□ -0.5
RCF1Q03713 ATS1YAL020C 1002 nt11.93□□□□□ -0.5
RCF1Q03713 RPP2BYDR382W 333 nt11.92□□□□□ -0.5
RCF1Q03713 RSB1YOR049C 1065 nt11.92□□□□□ -0.5
RCF1Q03713 INM2YDR287W 879 nt11.91□□□□□ -0.5
RCF1Q03713 PHO4YFR034C 939 nt11.91□□□□□ -0.5
RCF1Q03713 YBR220CYBR220C 1683 nt11.89□□□□□ -0.51
RCF1Q03713 TIR1YER011W 765 nt11.87□□□□□ -0.51
RCF1Q03713 YHR165W-AYHR165W-A 312 nt11.87□□□□□ -0.51
RCF1Q03713 EMI2YDR516C 1503 nt11.86□□□□□ -0.51
RCF1Q03713 YJR120WYJR120W 351 nt11.85□□□□□ -0.51
RCF1Q03713 YDR095CYDR095C 411 nt11.74□□□□□ -0.53
RCF1Q03713 SDH1YKL148C 1923 nt11.73□□□□□ -0.53
RCF1Q03713 SEC11YIR022W 504 nt11.72□□□□□ -0.53
RCF1Q03713 YDL221WYDL221W 552 nt11.71□□□□□ -0.53
RCF1Q03713 YBL100CYBL100C 315 nt11.71□□□□□ -0.53
RCF1Q03713 PCH2YBR186W 1695 nt11.69□□□□□ -0.54
RCF1Q03713 GUT2YIL155C 1950 nt11.63□□□□□ -0.55
RCF1Q03713 ALF1YNL148C 765 nt11.56□□□□□ -0.56
RCF1Q03713 RPP2AYOL039W 321 nt11.55□□□□□ -0.56
RCF1Q03713 SCC4YER147C 1875 nt11.54□□□□□ -0.56
RCF1Q03713 FUN26YAL022C 1554 nt11.53□□□□□ -0.56
RCF1Q03713 BDH2YAL061W 1254 nt11.51□□□□□ -0.57
RCF1Q03713 CAC2YML102W 1407 nt11.51□□□□□ -0.57
RCF1Q03713 PTP1YDL230W 1008 nt11.48□□□□□ -0.57
RCF1Q03713 SRB2YHR041C 633 nt11.46□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms