RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C TY1A-ORP0CX59 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-PR2P0CX60 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-DR5P0CX65 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-ER2P0CX66 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-GR3P0CX67 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-LR1P0CX68 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-MR2P0CX69 440 aa8.91□□□□□ -0.98
CLP1YOR250C SEC2P17065 759 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-JR2P47099 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-DR1Q03856 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-ML1Q04706 440 aaKnown RBP8.91□□□□□ -0.98
CLP1YOR250C TY1A-BRQ12217 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-NL2Q12470 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-GR2Q12485 440 aa8.91□□□□□ -0.98
CLP1YOR250C TEA1P47988 759 aa8.89□□□□□ -0.99
CLP1YOR250C RAS1P01119 309 aa8.88□□□□□ -0.99
CLP1YOR250C RTF1P53064 558 aa8.87□□□□□ -0.99
CLP1YOR250C ERG12P07277 443 aa8.85□□□□□ -0.99
CLP1YOR250C SPT16P32558 1035 aaKnown RBP8.85□□□□□ -0.99
CLP1YOR250C SIT4P20604 311 aa8.84□□□□□ -0.99
CLP1YOR250C PAT1P25644 796 aaKnown RBP8.84□□□□□ -0.99
CLP1YOR250C KEX2P13134 814 aa8.83□□□□□ -1
CLP1YOR250C YNR021WP53723 404 aaKnown RBP8.83□□□□□ -1
CLP1YOR250C SRC1Q03707 834 aa8.83□□□□□ -1
CLP1YOR250C YNL115CP53925 644 aa8.8□□□□□ -1
CLP1YOR250C ERF2Q06551 359 aa8.8□□□□□ -1
CLP1YOR250C RRN7P40992 514 aa8.8□□□□□ -1
CLP1YOR250C NIS1P53939 407 aa8.8□□□□□ -1
CLP1YOR250C SGS1P35187 1447 aa8.77□□□□□ -1
CLP1YOR250C ATF2P53296 535 aa8.77□□□□□ -1.01
CLP1YOR250C AGE1Q04412 482 aa8.75□□□□□ -1.01
CLP1YOR250C SPA2P23201 1466 aaKnown RBP8.74□□□□□ -1.01
CLP1YOR250C CST6P40535 587 aa8.74□□□□□ -1.01
CLP1YOR250C FPK1P53739 893 aa8.74□□□□□ -1.01
CLP1YOR250C LAM6Q08001 693 aa8.74□□□□□ -1.01
CLP1YOR250C TRK1P12685 1235 aa8.73□□□□□ -1.01
CLP1YOR250C TUB4P53378 473 aa8.73□□□□□ -1.01
CLP1YOR250C YMR196WQ04336 1088 aa8.73□□□□□ -1.01
CLP1YOR250C AIM7Q12156 149 aa8.73□□□□□ -1.01
CLP1YOR250C GLC3P32775 704 aa8.71□□□□□ -1.02
CLP1YOR250C PAC1P39946 494 aaKnown RBP8.71□□□□□ -1.02
CLP1YOR250C LEU3P08638 886 aa8.7□□□□□ -1.02
CLP1YOR250C BDP1P46678 594 aa8.69□□□□□ -1.02
CLP1YOR250C HST2P53686 357 aa8.69□□□□□ -1.02
CLP1YOR250C MOD5P07884 428 aa8.68□□□□□ -1.02
CLP1YOR250C SLY41P22215 453 aa8.66□□□□□ -1.02
CLP1YOR250C FRK1Q03002 865 aaPredicted RBP8.66□□□□□ -1.02
CLP1YOR250C TPD3P31383 635 aa8.64□□□□□ -1.03
CLP1YOR250C GLN1P32288 370 aaKnown RBP8.63□□□□□ -1.03
CLP1YOR250C HED1Q03937 162 aa8.63□□□□□ -1.03
CLP1YOR250C KXD1P53158 218 aa8.62□□□□□ -1.03
CLP1YOR250C PUS6P53294 404 aa8.62□□□□□ -1.03
CLP1YOR250C MMP1Q12372 583 aa8.62□□□□□ -1.03
CLP1YOR250C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
CLP1YOR250C CDC4P07834 779 aa8.6□□□□□ -1.03
CLP1YOR250C CLA4P48562 842 aa8.6□□□□□ -1.03
CLP1YOR250C SSN2P38931 1420 aa8.59□□□□□ -1.03
CLP1YOR250C AIR1P40507 360 aaKnown RBP8.58□□□□□ -1.04
CLP1YOR250C HXT10P43581 546 aa8.58□□□□□ -1.04
CLP1YOR250C RPA14P50106 137 aa8.58□□□□□ -1.04
CLP1YOR250C SCJ1P25303 377 aa8.57□□□□□ -1.04
CLP1YOR250C TBF1Q02457 562 aa8.57□□□□□ -1.04
CLP1YOR250C PDC1P06169 563 aaKnown RBP8.56□□□□□ -1.04
CLP1YOR250C RRD1P40454 393 aaKnown RBP8.56□□□□□ -1.04
CLP1YOR250C TRM1P15565 570 aaKnown RBP8.55□□□□□ -1.04
CLP1YOR250C YPR097WQ06839 1073 aa8.55□□□□□ -1.04
CLP1YOR250C ALR1Q08269 859 aa8.55□□□□□ -1.04
CLP1YOR250C RPN1P38764 993 aaKnown RBP8.54□□□□□ -1.04
CLP1YOR250C YDL206WQ12424 762 aa8.54□□□□□ -1.04
CLP1YOR250C ESS1P22696 170 aa8.53□□□□□ -1.04
CLP1YOR250C CSN12P47130 423 aa8.53□□□□□ -1.04
CLP1YOR250C BRE2P43132 505 aa8.52□□□□□ -1.05
CLP1YOR250C GCR2Q01722 534 aa8.52□□□□□ -1.05
CLP1YOR250C PUS5Q06244 254 aa8.51□□□□□ -1.05
CLP1YOR250C TYW1Q08960 810 aaKnown RBP8.51□□□□□ -1.05
CLP1YOR250C KIN1P13185 1064 aa8.5□□□□□ -1.05
CLP1YOR250C KTR1P27810 393 aaKnown RBP8.5□□□□□ -1.05
CLP1YOR250C RSC30P38781 883 aa8.49□□□□□ -1.05
CLP1YOR250C INO80P53115 1489 aa8.48□□□□□ -1.05
CLP1YOR250C YJU3P28321 313 aa8.48□□□□□ -1.05
CLP1YOR250C SYH1Q02875 849 aaKnown RBP8.48□□□□□ -1.05
CLP1YOR250C MET32Q12041 191 aa8.47□□□□□ -1.05
CLP1YOR250C PKH3Q03306 898 aaPredicted RBP8.46□□□□□ -1.06
CLP1YOR250C SSA2P10592 639 aaKnown RBP8.45□□□□□ -1.06
CLP1YOR250C AFT1P22149 690 aa8.45□□□□□ -1.06
CLP1YOR250C ASH1P34233 588 aa8.43□□□□□ -1.06
CLP1YOR250C HST3P53687 447 aa8.43□□□□□ -1.06
CLP1YOR250C ARG8P18544 423 aa8.41□□□□□ -1.06
CLP1YOR250C KIP2P28743 706 aa8.4□□□□□ -1.06
CLP1YOR250C IXR1P33417 597 aa8.39□□□□□ -1.07
CLP1YOR250C RAD59Q12223 238 aa8.39□□□□□ -1.07
CLP1YOR250C RGA2Q06407 1009 aa8.38□□□□□ -1.07
CLP1YOR250C VAC17P25591 423 aa8.37□□□□□ -1.07
CLP1YOR250C RTT106P40161 455 aa8.37□□□□□ -1.07
CLP1YOR250C MSB3P48566 633 aaPredicted RBP8.37□□□□□ -1.07
CLP1YOR250C MRT4P33201 236 aaKnown RBP8.36□□□□□ -1.07
CLP1YOR250C GUA1P38625 525 aaKnown RBP8.32□□□□□ -1.08
CLP1YOR250C YJR115WP47152 169 aa8.31□□□□□ -1.08
CLP1YOR250C HPC2Q01448 625 aa8.31□□□□□ -1.08
CLP1YOR250C ENV9Q08651 330 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms