RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C MTC1P47018 478 aaKnown RBP16.83■□□□□ 0.28
CLP1YOR250C DRS1P32892 752 aaKnown RBP15.93■□□□□ 0.14
CLP1YOR250C FAP1P53971 965 aa14.76□□□□□ -0.05
CLP1YOR250C PRI1P10363 409 aa14.03□□□□□ -0.16
CLP1YOR250C AAD16Q02895 342 aa13.91□□□□□ -0.18
CLP1YOR250C ISW2Q08773 1120 aa13.9□□□□□ -0.18
CLP1YOR250C DIP2Q12220 943 aaPredicted RBP13.89□□□□□ -0.19
CLP1YOR250C PRY3P47033 881 aa13.85□□□□□ -0.19
CLP1YOR250C RPG1P38249 964 aaKnown RBP13.69□□□□□ -0.22
CLP1YOR250C AVT3P36062 692 aa13.47□□□□□ -0.25
CLP1YOR250C BFR2Q06631 534 aaKnown RBP13.38□□□□□ -0.27
CLP1YOR250C RSE1Q04693 1361 aaKnown RBP13.38□□□□□ -0.27
CLP1YOR250C TSR3Q12094 313 aaKnown RBP13.21□□□□□ -0.29
CLP1YOR250C HAA1Q12753 694 aaKnown RBP13.11□□□□□ -0.31
CLP1YOR250C YCK3P39962 524 aa13.1□□□□□ -0.31
CLP1YOR250C RPL17AP05740 184 aaKnown RBP12.89□□□□□ -0.35
CLP1YOR250C RPL17BP46990 184 aaKnown RBP12.89□□□□□ -0.35
CLP1YOR250C REB1P21538 810 aa12.83□□□□□ -0.36
CLP1YOR250C MRPL32P25348 183 aa12.76□□□□□ -0.37
CLP1YOR250C SPT21P35209 758 aa12.39□□□□□ -0.43
CLP1YOR250C YGL015CP33199 130 aa12.19□□□□□ -0.46
CLP1YOR250C YKR023WP36119 530 aaKnown RBP12.16□□□□□ -0.46
CLP1YOR250C CDC27P38042 758 aa12.11□□□□□ -0.47
CLP1YOR250C RIM101P33400 625 aa12.05□□□□□ -0.48
CLP1YOR250C TFA1P36100 482 aa12.01□□□□□ -0.49
CLP1YOR250C TFC8Q12308 588 aa11.94□□□□□ -0.5
CLP1YOR250C HOP09932 586 aa11.87□□□□□ -0.51
CLP1YOR250C UBP10P53874 792 aaPredicted RBP11.85□□□□□ -0.51
CLP1YOR250C DCD1P06773 312 aa11.78□□□□□ -0.52
CLP1YOR250C MAP2P38174 421 aaKnown RBP11.72□□□□□ -0.53
CLP1YOR250C OXP1P28273 1286 aa11.6□□□□□ -0.55
CLP1YOR250C BCH2P36122 765 aa11.54□□□□□ -0.56
CLP1YOR250C SCY1P53009 804 aa11.53□□□□□ -0.56
CLP1YOR250C YIL055CP40523 627 aaKnown RBP11.45□□□□□ -0.58
CLP1YOR250C SLX5P32828 619 aaKnown RBP11.41□□□□□ -0.58
CLP1YOR250C PTP3P40048 928 aa11.4□□□□□ -0.58
CLP1YOR250C TIF4632P39936 914 aaKnown RBP11.35□□□□□ -0.59
CLP1YOR250C TGL3P40308 642 aa11.3□□□□□ -0.6
CLP1YOR250C RSM7P47150 247 aa11.29□□□□□ -0.6
CLP1YOR250C EPS1P40557 701 aa11.28□□□□□ -0.6
CLP1YOR250C YAH1Q12184 172 aaKnown RBP11.25□□□□□ -0.61
CLP1YOR250C BDF1P35817 686 aa11.23□□□□□ -0.61
CLP1YOR250C BBC1P47068 1157 aa11.18□□□□□ -0.62
CLP1YOR250C AI2P03876 854 aa11.15□□□□□ -0.62
CLP1YOR250C YLR271WQ06152 274 aa11.12□□□□□ -0.63
CLP1YOR250C SSP1P38871 571 aa11.09□□□□□ -0.63
CLP1YOR250C BUD31P25337 157 aaPredicted RBP11.05□□□□□ -0.64
CLP1YOR250C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
CLP1YOR250C PSD2P53037 1138 aaKnown RBP10.96□□□□□ -0.65
CLP1YOR250C NSR1P27476 414 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
CLP1YOR250C UBP9P39967 754 aa10.88□□□□□ -0.67
CLP1YOR250C MST1P07236 462 aa10.87□□□□□ -0.67
CLP1YOR250C YOR238WQ08634 303 aa10.83□□□□□ -0.68
CLP1YOR250C MGA2P40578 1113 aa10.81□□□□□ -0.68
CLP1YOR250C YAP5P40574 245 aa10.8□□□□□ -0.68
CLP1YOR250C MRM1P25270 412 aa10.74□□□□□ -0.69
CLP1YOR250C CST9Q06032 482 aa10.72□□□□□ -0.69
CLP1YOR250C RTG3P38165 486 aa10.59□□□□□ -0.71
CLP1YOR250C YBL029C-AQ3E756 94 aa10.56□□□□□ -0.72
CLP1YOR250C VPS29P38759 282 aa10.54□□□□□ -0.72
CLP1YOR250C GTT3P39996 337 aa10.53□□□□□ -0.72
CLP1YOR250C VNX1P42839 908 aa10.52□□□□□ -0.73
CLP1YOR250C YMR1P47147 688 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
CLP1YOR250C SIS1P25294 352 aaKnown RBP10.51□□□□□ -0.73
CLP1YOR250C PIB1Q06651 286 aa10.44□□□□□ -0.74
CLP1YOR250C DBP1P24784 617 aaKnown RBP10.43□□□□□ -0.74
CLP1YOR250C WSC3Q12215 556 aa10.43□□□□□ -0.74
CLP1YOR250C RCR1P38212 213 aa10.4□□□□□ -0.74
CLP1YOR250C SPP1Q03012 353 aa10.4□□□□□ -0.74
CLP1YOR250C STS1P38637 319 aa10.39□□□□□ -0.75
CLP1YOR250C TIF11P38912 153 aaKnown RBP10.37□□□□□ -0.75
CLP1YOR250C YFR006WP43590 535 aa10.35□□□□□ -0.75
CLP1YOR250C MSB4Q12317 492 aa10.35□□□□□ -0.75
CLP1YOR250C VMA1P17255 1071 aaKnown RBP10.32□□□□□ -0.76
CLP1YOR250C SAM3Q08986 587 aa10.31□□□□□ -0.76
CLP1YOR250C EAP1P36041 632 aaKnown RBP10.28□□□□□ -0.76
CLP1YOR250C YOL036WQ08206 761 aa10.27□□□□□ -0.77
CLP1YOR250C ULI1P43604 169 aa10.25□□□□□ -0.77
CLP1YOR250C RAM2P29703 316 aa10.24□□□□□ -0.77
CLP1YOR250C MAK11P20484 414 aaKnown RBP10.22□□□□□ -0.77
CLP1YOR250C IOC2Q12072 812 aa10.22□□□□□ -0.77
CLP1YOR250C SET4P42948 560 aa10.21□□□□□ -0.78
CLP1YOR250C ABP1P15891 592 aaKnown RBP10.18□□□□□ -0.78
CLP1YOR250C FKH1P40466 484 aa10.18□□□□□ -0.78
CLP1YOR250C LDB19Q12502 818 aa10.17□□□□□ -0.78
CLP1YOR250C AIR2Q12476 344 aaKnown RBP10.14□□□□□ -0.79
CLP1YOR250C TRP5P00931 707 aaKnown RBP10.13□□□□□ -0.79
CLP1YOR250C GYP5Q12344 894 aa10.13□□□□□ -0.79
CLP1YOR250C MIF2P35201 549 aa10.07□□□□□ -0.8
CLP1YOR250C YNL035CP53962 389 aaKnown RBP10.06□□□□□ -0.8
CLP1YOR250C HTA1P04911 132 aaKnown RBP10.05□□□□□ -0.8
CLP1YOR250C HTA2P04912 132 aa10.05□□□□□ -0.8
CLP1YOR250C COQ8P27697 501 aa10.05□□□□□ -0.8
CLP1YOR250C RTG1P32607 177 aa10.04□□□□□ -0.8
CLP1YOR250C SEC61P32915 480 aa10.04□□□□□ -0.8
CLP1YOR250C EDS1P38073 919 aa10.04□□□□□ -0.8
CLP1YOR250C YJL171CP46992 396 aa10.04□□□□□ -0.8
CLP1YOR250C JIP4Q03361 876 aa10.03□□□□□ -0.8
CLP1YOR250C GRE2Q12068 342 aaKnown RBP10.03□□□□□ -0.8
CLP1YOR250C NOP53Q12080 455 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms