RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C RFC1P38630 861 aaKnown RBP7.33□□□□□ -1.24
SKI2YLR398C IOC4Q04213 475 aa7.33□□□□□ -1.24
SKI2YLR398C SES1P07284 462 aaKnown RBP7.32□□□□□ -1.24
SKI2YLR398C URN1Q06525 465 aaKnown RBP7.32□□□□□ -1.24
SKI2YLR398C PDR5P33302 1511 aaKnown RBP7.32□□□□□ -1.24
SKI2YLR398C SLN1P39928 1220 aaPredicted RBP7.31□□□□□ -1.24
SKI2YLR398C PCT1P13259 424 aa7.31□□□□□ -1.24
SKI2YLR398C YGR130CP53278 816 aa7.31□□□□□ -1.24
SKI2YLR398C RMD1Q03441 430 aa7.3□□□□□ -1.24
SKI2YLR398C DPB3P27344 201 aa7.3□□□□□ -1.24
SKI2YLR398C SAP1P39955 897 aaKnown RBP7.3□□□□□ -1.24
SKI2YLR398C DID4P36108 232 aa7.29□□□□□ -1.24
SKI2YLR398C RPN1P38764 993 aaKnown RBP7.29□□□□□ -1.24
SKI2YLR398C MSH4P40965 878 aaPredicted RBP7.29□□□□□ -1.24
SKI2YLR398C BDP1P46678 594 aa7.29□□□□□ -1.24
SKI2YLR398C TPD3P31383 635 aa7.28□□□□□ -1.24
SKI2YLR398C RIX1P38883 763 aaPredicted RBP7.28□□□□□ -1.24
SKI2YLR398C NOP8Q08287 484 aaPredicted RBP7.28□□□□□ -1.24
SKI2YLR398C SMC4Q12267 1418 aa7.28□□□□□ -1.24
SKI2YLR398C PDR15Q04182 1529 aaKnown RBP7.28□□□□□ -1.24
SKI2YLR398C SMC3P47037 1230 aa7.28□□□□□ -1.24
SKI2YLR398C CHZ1P40019 153 aaPredicted RBP7.27□□□□□ -1.24
SKI2YLR398C SPP41P38904 1435 aa7.27□□□□□ -1.25
SKI2YLR398C NST1P53935 1240 aa7.27□□□□□ -1.25
SKI2YLR398C PRP31P49704 494 aaPredicted RBP7.27□□□□□ -1.25
SKI2YLR398C LCD1Q04377 747 aa7.27□□□□□ -1.25
SKI2YLR398C TOP1P04786 769 aa7.27□□□□□ -1.25
SKI2YLR398C SFB2P53953 876 aa7.27□□□□□ -1.25
SKI2YLR398C RPO21P04050 1733 aaKnown RBP7.26□□□□□ -1.25
SKI2YLR398C OPY1P38271 328 aa7.26□□□□□ -1.25
SKI2YLR398C KAR2P16474 682 aaKnown RBP7.26□□□□□ -1.25
SKI2YLR398C NMD2P38798 1089 aaKnown RBP7.25□□□□□ -1.25
SKI2YLR398C NNF2P53253 936 aa7.25□□□□□ -1.25
SKI2YLR398C PRP3Q03338 469 aaPredicted RBP7.25□□□□□ -1.25
SKI2YLR398C GCN2P15442 1659 aa7.25□□□□□ -1.25
SKI2YLR398C RRP43P25359 394 aaPredicted RBP7.24□□□□□ -1.25
SKI2YLR398C NOC2P39744 710 aaKnown RBP7.24□□□□□ -1.25
SKI2YLR398C DIP2Q12220 943 aaPredicted RBP7.24□□□□□ -1.25
SKI2YLR398C MSP1P28737 362 aa7.24□□□□□ -1.25
SKI2YLR398C RTG3P38165 486 aa7.23□□□□□ -1.25
SKI2YLR398C TOP2P06786 1428 aaKnown RBP7.23□□□□□ -1.25
SKI2YLR398C MNR2P35724 969 aa7.23□□□□□ -1.25
SKI2YLR398C REI1P38344 393 aaPredicted RBP7.23□□□□□ -1.25
SKI2YLR398C GIN4Q12263 1142 aa7.23□□□□□ -1.25
SKI2YLR398C YTA7P40340 1379 aa7.23□□□□□ -1.25
SKI2YLR398C SRS2P12954 1174 aa7.22□□□□□ -1.25
SKI2YLR398C BIK1P11709 440 aa7.22□□□□□ -1.25
SKI2YLR398C SGD1Q06132 899 aa7.22□□□□□ -1.25
SKI2YLR398C RUD3Q12234 484 aaKnown RBP7.22□□□□□ -1.25
SKI2YLR398C VAS1P07806 1104 aaKnown RBP7.21□□□□□ -1.25
SKI2YLR398C TIM50Q02776 476 aa7.21□□□□□ -1.25
SKI2YLR398C CYC8P14922 966 aa7.21□□□□□ -1.26
SKI2YLR398C SCT1P32784 759 aa7.21□□□□□ -1.26
SKI2YLR398C APC11Q12157 165 aa7.21□□□□□ -1.26
SKI2YLR398C SPO14P36126 1683 aa7.21□□□□□ -1.26
SKI2YLR398C RPA190P10964 1664 aaKnown RBP7.2□□□□□ -1.26
SKI2YLR398C MSH3P25336 1018 aa7.2□□□□□ -1.26
SKI2YLR398C RIM101P33400 625 aa7.2□□□□□ -1.26
SKI2YLR398C HOS3Q02959 697 aaKnown RBP7.2□□□□□ -1.26
SKI2YLR398C MCM2P29469 868 aa7.2□□□□□ -1.26
SKI2YLR398C RNT1Q02555 471 aa7.2□□□□□ -1.26
SKI2YLR398C RSM25P40496 264 aa7.19□□□□□ -1.26
SKI2YLR398C MAK21Q12176 1025 aaKnown RBP7.19□□□□□ -1.26
SKI2YLR398C SPE2P21182 396 aa7.19□□□□□ -1.26
SKI2YLR398C SIP3P38717 1229 aa7.19□□□□□ -1.26
SKI2YLR398C PET123P17558 318 aa7.19□□□□□ -1.26
SKI2YLR398C NUG1P40010 520 aaKnown RBP7.19□□□□□ -1.26
SKI2YLR398C NTE1Q04958 1679 aa7.19□□□□□ -1.26
SKI2YLR398C TCD1P38756 429 aa7.18□□□□□ -1.26
SKI2YLR398C RBA50Q04418 439 aa7.18□□□□□ -1.26
SKI2YLR398C SNT2P53127 1403 aa7.18□□□□□ -1.26
SKI2YLR398C VPS60Q03390 229 aa7.18□□□□□ -1.26
SKI2YLR398C MDS3P53094 1487 aa7.18□□□□□ -1.26
SKI2YLR398C LTV1P34078 463 aa7.18□□□□□ -1.26
SKI2YLR398C MGA2P40578 1113 aa7.17□□□□□ -1.26
SKI2YLR398C SRC1Q03707 834 aa7.17□□□□□ -1.26
SKI2YLR398C TSR2Q06672 205 aaKnown RBP7.17□□□□□ -1.26
SKI2YLR398C NKP1Q12493 238 aa7.17□□□□□ -1.26
SKI2YLR398C GRX3Q03835 250 aa7.17□□□□□ -1.26
SKI2YLR398C PDR12Q02785 1511 aa7.17□□□□□ -1.26
SKI2YLR398C PSE1P32337 1089 aaKnown RBP7.17□□□□□ -1.26
SKI2YLR398C YOL098CQ12496 1037 aa7.17□□□□□ -1.26
SKI2YLR398C VPS20Q04272 221 aa7.16□□□□□ -1.26
SKI2YLR398C YPR097WQ06839 1073 aa7.16□□□□□ -1.26
SKI2YLR398C MDM38Q08179 573 aa7.16□□□□□ -1.26
SKI2YLR398C MHP1P43638 1398 aa7.16□□□□□ -1.26
SKI2YLR398C PEX14P53112 341 aa7.16□□□□□ -1.26
SKI2YLR398C LAM1P38851 1228 aa7.15□□□□□ -1.26
SKI2YLR398C TEA1P47988 759 aa7.15□□□□□ -1.26
SKI2YLR398C ECM16Q04217 1267 aaKnown RBP7.15□□□□□ -1.26
SKI2YLR398C CTI6Q08923 506 aa7.15□□□□□ -1.26
SKI2YLR398C RTF1P53064 558 aa7.15□□□□□ -1.26
SKI2YLR398C SUI2P20459 304 aaKnown RBP7.15□□□□□ -1.27
SKI2YLR398C SAC6P32599 642 aaKnown RBP7.15□□□□□ -1.27
SKI2YLR398C CAJ1P39101 391 aa7.15□□□□□ -1.27
SKI2YLR398C NAB3P38996 802 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
SKI2YLR398C ESF1Q06344 628 aaKnown RBP7.14□□□□□ -1.27
SKI2YLR398C TLG2Q08144 397 aa7.14□□□□□ -1.27
SKI2YLR398C TAF8Q03750 510 aa7.14□□□□□ -1.27
SKI2YLR398C POL32P47110 350 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms