RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C RQC2Q12532 1038 aaKnown RBP9.05□□□□□ -0.96
SKI2YLR398C TAF7Q05021 590 aa8.84□□□□□ -0.99
SKI2YLR398C SPA2P23201 1466 aaKnown RBP8.81□□□□□ -1
SKI2YLR398C BFR2Q06631 534 aaKnown RBP8.77□□□□□ -1.01
SKI2YLR398C NOP2P40991 618 aaKnown RBP8.76□□□□□ -1.01
SKI2YLR398C DRS1P32892 752 aaKnown RBP8.62□□□□□ -1.03
SKI2YLR398C SAS10Q12136 610 aaPredicted RBP8.59□□□□□ -1.03
SKI2YLR398C LEU3P08638 886 aa8.57□□□□□ -1.04
SKI2YLR398C CAB3P36076 571 aa8.55□□□□□ -1.04
SKI2YLR398C SSN2P38931 1420 aa8.54□□□□□ -1.04
SKI2YLR398C SGS1P35187 1447 aa8.53□□□□□ -1.04
SKI2YLR398C TY1B-DR4Q07793 1604 aa8.51□□□□□ -1.05
SKI2YLR398C MNN4P36044 1178 aa8.44□□□□□ -1.06
SKI2YLR398C AIM44Q99299 758 aa8.44□□□□□ -1.06
SKI2YLR398C INO80P53115 1489 aa8.43□□□□□ -1.06
SKI2YLR398C TFA1P36100 482 aa8.41□□□□□ -1.06
SKI2YLR398C NSR1P27476 414 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SKI2YLR398C ORC1P54784 914 aaPredicted RBP8.33□□□□□ -1.08
SKI2YLR398C RSE1Q04693 1361 aaKnown RBP8.27□□□□□ -1.08
SKI2YLR398C LEO1P38439 464 aa8.26□□□□□ -1.09
SKI2YLR398C FUN12P39730 1002 aaKnown RBP8.19□□□□□ -1.1
SKI2YLR398C POL5P39985 1022 aaKnown RBP8.17□□□□□ -1.1
SKI2YLR398C YFR016CP43597 1233 aaKnown RBP8.17□□□□□ -1.1
SKI2YLR398C EBP2P36049 427 aaKnown RBP8.16□□□□□ -1.1
SKI2YLR398C RTT106P40161 455 aa8.14□□□□□ -1.11
SKI2YLR398C IFH1P39520 1085 aa8.14□□□□□ -1.11
SKI2YLR398C TCB3Q03640 1545 aaKnown RBP8.12□□□□□ -1.11
SKI2YLR398C CHD1P32657 1468 aa8.11□□□□□ -1.11
SKI2YLR398C HSL1P34244 1518 aa8.1□□□□□ -1.11
SKI2YLR398C YPR148CQ06523 435 aa8.1□□□□□ -1.11
SKI2YLR398C EAF7P53911 425 aaKnown RBP8.09□□□□□ -1.11
SKI2YLR398C SIN3P22579 1536 aa8.08□□□□□ -1.12
SKI2YLR398C SKI3P17883 1432 aaKnown RBP8.08□□□□□ -1.12
SKI2YLR398C FPR3P38911 411 aaKnown RBP8.03□□□□□ -1.12
SKI2YLR398C RNA1P11745 407 aaKnown RBP8.01□□□□□ -1.13
SKI2YLR398C ENP1P38333 483 aaKnown RBP8□□□□□ -1.13
SKI2YLR398C HIR3P47171 1648 aa8□□□□□ -1.13
SKI2YLR398C SSK2P53599 1579 aa7.99□□□□□ -1.13
SKI2YLR398C AVT3P36062 692 aa7.96□□□□□ -1.14
SKI2YLR398C NUP170P38181 1502 aa7.94□□□□□ -1.14
SKI2YLR398C SPT7P35177 1332 aa7.93□□□□□ -1.14
SKI2YLR398C THO2P53552 1597 aaKnown RBP7.92□□□□□ -1.14
SKI2YLR398C XRN1P22147 1528 aaKnown RBP7.91□□□□□ -1.14
SKI2YLR398C ESP1Q03018 1630 aa7.9□□□□□ -1.14
SKI2YLR398C MON2P48563 1636 aaPredicted RBP7.89□□□□□ -1.15
SKI2YLR398C YRB30P53107 440 aaPredicted RBP7.87□□□□□ -1.15
SKI2YLR398C RPC31P17890 251 aa7.85□□□□□ -1.15
SKI2YLR398C TY1B-DR3Q99231 1755 aa7.85□□□□□ -1.15
SKI2YLR398C YGL081WP53156 320 aa7.85□□□□□ -1.15
SKI2YLR398C REV3P14284 1504 aa7.83□□□□□ -1.16
SKI2YLR398C MMS22Q06164 1454 aa7.83□□□□□ -1.16
SKI2YLR398C SPT6P23615 1451 aaKnown RBP7.81□□□□□ -1.16
SKI2YLR398C NOP7P53261 605 aaKnown RBP7.81□□□□□ -1.16
SKI2YLR398C CLC1P17891 233 aa7.81□□□□□ -1.16
SKI2YLR398C TAF2P23255 1407 aa7.8□□□□□ -1.16
SKI2YLR398C TY2B-LR1P0C2J3 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-FP0CX63 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-GR2P0CX64 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-CP25384 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-DR2Q03494 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY1B-DR1Q03855 1755 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-DR3Q07791 1770 aaKnown RBP7.79□□□□□ -1.16
SKI2YLR398C TY2B-OR1Q12113 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-DR1Q12472 1770 aa7.79□□□□□ -1.16
SKI2YLR398C TY2B-OR2Q12501 1770 aa7.79□□□□□ -1.16
SKI2YLR398C UFD4P33202 1483 aa7.78□□□□□ -1.16
SKI2YLR398C ATG2P53855 1592 aa7.77□□□□□ -1.17
SKI2YLR398C PSD2P53037 1138 aaKnown RBP7.76□□□□□ -1.17
SKI2YLR398C SWR1Q05471 1514 aa7.76□□□□□ -1.17
SKI2YLR398C SIS2P36024 562 aa7.75□□□□□ -1.17
SKI2YLR398C TY2B-BQ12491 1770 aa7.74□□□□□ -1.17
SKI2YLR398C DJP1P40564 432 aa7.74□□□□□ -1.17
SKI2YLR398C SPB4P25808 606 aaPredicted RBP7.73□□□□□ -1.17
SKI2YLR398C STU1P38198 1513 aa7.71□□□□□ -1.18
SKI2YLR398C ECM5Q03214 1411 aa7.7□□□□□ -1.18
SKI2YLR398C MLP2P40457 1679 aa7.68□□□□□ -1.18
SKI2YLR398C CKB1P43639 278 aa7.68□□□□□ -1.18
SKI2YLR398C YPP1P46951 817 aa7.68□□□□□ -1.18
SKI2YLR398C CWC22P53333 577 aaKnown RBP7.68□□□□□ -1.18
SKI2YLR398C POL1P13382 1468 aa7.67□□□□□ -1.18
SKI2YLR398C DOS2P54858 310 aa7.67□□□□□ -1.18
SKI2YLR398C TY1B-HO13535 1793 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-DR5P0C2I2 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-DR6P0C2I3 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-LR2P0C2I5 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-LR3P0C2I6 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C TY1B-PR1P0C2I9 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C TY1B-PR2P0C2J0 1756 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-PR3P0C2J1 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C TY1B-JR1P47098 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-ML2Q03434 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C TY1B-ER1Q03612 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-ML1Q04711 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C TY1B-GR2Q12269 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-OLQ12273 1755 aa7.66□□□□□ -1.18
SKI2YLR398C TY1B-PLQ12414 1755 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C QCR6P00127 147 aa7.66□□□□□ -1.18
SKI2YLR398C MFT1P33441 392 aaKnown RBP7.66□□□□□ -1.18
SKI2YLR398C MTC1P47018 478 aaKnown RBP7.65□□□□□ -1.18
SKI2YLR398C PEP1P32319 1579 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms