Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 NSR1YGR159C 1245 nt21.57■■□□□ 1.04
VPS60Q03390 YML009W-BYML009W-B 477 nt21.12■□□□□ 0.97
VPS60Q03390 NOP1YDL014W 984 nt20.32■□□□□ 0.84
VPS60Q03390 MDJ1YFL016C 1536 nt19.71■□□□□ 0.75
VPS60Q03390 YJL027CYJL027C 417 nt18.16■□□□□ 0.5
VPS60Q03390 YKL036CYKL036C 393 nt18.14■□□□□ 0.49
VPS60Q03390 SRX1YKL086W 384 nt17.73■□□□□ 0.43
VPS60Q03390 Q0297Q0297 156 nt17.56■□□□□ 0.4
VPS60Q03390 DBP2YNL112W 1641 nt17.18■□□□□ 0.34
VPS60Q03390 YBR190WYBR190W 312 nt17■□□□□ 0.31
VPS60Q03390 SSA3YBL075C 1950 nt16.93■□□□□ 0.3
VPS60Q03390 YCR051WYCR051W 669 nt16.77■□□□□ 0.28
VPS60Q03390 RTC3YHR087W 336 nt16.59■□□□□ 0.25
VPS60Q03390 TRN1tP(UGG)A 72 nt16.39■□□□□ 0.21
VPS60Q03390 SUF9tP(UGG)F 72 nt16.39■□□□□ 0.21
VPS60Q03390 SUF8tP(UGG)H 72 nt16.39■□□□□ 0.21
VPS60Q03390 tP(UGG)LtP(UGG)L 72 nt16.39■□□□□ 0.21
VPS60Q03390 SUF7tP(UGG)M 72 nt16.39■□□□□ 0.21
VPS60Q03390 tP(UGG)N1tP(UGG)N1 72 nt16.39■□□□□ 0.21
VPS60Q03390 tP(UGG)N2tP(UGG)N2 72 nt16.39■□□□□ 0.21
VPS60Q03390 tP(UGG)O1tP(UGG)O1 72 nt16.39■□□□□ 0.21
VPS60Q03390 SUF11tP(UGG)O2 72 nt16.39■□□□□ 0.21
VPS60Q03390 CCC1YLR220W 969 nt16.22■□□□□ 0.19
VPS60Q03390 SCS3YGL126W 1143 nt16.15■□□□□ 0.18
VPS60Q03390 RVS167YDR388W 1449 nt16.05■□□□□ 0.16
VPS60Q03390 PUT4YOR348C 1884 nt15.9■□□□□ 0.14
VPS60Q03390 SCJ1YMR214W 1134 nt15.78■□□□□ 0.12
VPS60Q03390 RPP1BYDL130W 321 nt15.75■□□□□ 0.11
VPS60Q03390 YOL085CYOL085C 342 nt15.72■□□□□ 0.11
VPS60Q03390 PKP1YIL042C 1185 nt15.54■□□□□ 0.08
VPS60Q03390 ARE1YCR048W 1833 nt15.41■□□□□ 0.06
VPS60Q03390 POA1YBR022W 534 nt15.36■□□□□ 0.05
VPS60Q03390 SHR5YOL110W 714 nt15.33■□□□□ 0.04
VPS60Q03390 tP(UGG)O3tP(UGG)O3 72 nt15.3■□□□□ 0.04
VPS60Q03390 URN1YPR152C 1398 nt15.29■□□□□ 0.04
VPS60Q03390 SAH1YER043C 1350 nt15.25■□□□□ 0.03
VPS60Q03390 YHR049C-AYHR049C-A 297 nt15.22■□□□□ 0.03
VPS60Q03390 OPI9YLR338W 858 nt15.2■□□□□ 0.02
VPS60Q03390 BSC6YOL137W 1494 nt15.14■□□□□ 0.01
VPS60Q03390 PET122YER153C 765 nt15.11■□□□□ 0.01
VPS60Q03390 DEP1YAL013W 1218 nt15.09■□□□□ 0.01
VPS60Q03390 SPT5YML010W 3192 nt14.97□□□□□ -0.01
VPS60Q03390 RPN10YHR200W 807 nt14.94□□□□□ -0.02
VPS60Q03390 SSA4YER103W 1929 nt14.9□□□□□ -0.02
VPS60Q03390 BUD23YCR047C 828 nt14.83□□□□□ -0.04
VPS60Q03390 YDJ1YNL064C 1230 nt14.82□□□□□ -0.04
VPS60Q03390 SCR1SCR1 522 nt14.81□□□□□ -0.04
VPS60Q03390 YNL208WYNL208W 600 nt14.8□□□□□ -0.04
VPS60Q03390 PUN1YLR414C 792 nt14.76□□□□□ -0.05
VPS60Q03390 PTC2YER089C 1395 nt14.68□□□□□ -0.06
VPS60Q03390 RRN5YLR141W 1092 nt14.61□□□□□ -0.07
VPS60Q03390 NAB2YGL122C 1578 nt14.59□□□□□ -0.07
VPS60Q03390 GAR1YHR089C 618 nt14.57□□□□□ -0.08
VPS60Q03390 YJR018WYJR018W 363 nt14.55□□□□□ -0.08
VPS60Q03390 BDF1YLR399C 2061 nt14.43□□□□□ -0.1
VPS60Q03390 YER088W-BYER088W-B 147 nt14.32□□□□□ -0.12
VPS60Q03390 FIS1YIL065C 468 nt14.29□□□□□ -0.12
VPS60Q03390 MEP2YNL142W 1500 nt14.29□□□□□ -0.12
VPS60Q03390 ATS1YAL020C 1002 nt14.28□□□□□ -0.12
VPS60Q03390 DAL1YIR027C 1383 nt14.26□□□□□ -0.13
VPS60Q03390 TAT1YBR069C 1860 nt14.21□□□□□ -0.13
VPS60Q03390 FPR4YLR449W 1179 nt14.21□□□□□ -0.13
VPS60Q03390 YJR120WYJR120W 351 nt14.15□□□□□ -0.14
VPS60Q03390 INM2YDR287W 879 nt14.13□□□□□ -0.15
VPS60Q03390 TIR1YER011W 765 nt14.12□□□□□ -0.15
VPS60Q03390 PHO4YFR034C 939 nt14.12□□□□□ -0.15
VPS60Q03390 RSB1YOR049C 1065 nt14.12□□□□□ -0.15
VPS60Q03390 RPP2BYDR382W 333 nt14.1□□□□□ -0.15
VPS60Q03390 YPS1YLR120C 1710 nt14.08□□□□□ -0.16
VPS60Q03390 PAC11YDR488C 1602 nt14.07□□□□□ -0.16
VPS60Q03390 SSA1YAL005C 1929 nt14.07□□□□□ -0.16
VPS60Q03390 DCW1YKL046C 1350 nt14.03□□□□□ -0.16
VPS60Q03390 YHR165W-AYHR165W-A 312 nt13.97□□□□□ -0.17
VPS60Q03390 YDR095CYDR095C 411 nt13.89□□□□□ -0.19
VPS60Q03390 YBL100CYBL100C 315 nt13.88□□□□□ -0.19
VPS60Q03390 EMI2YDR516C 1503 nt13.85□□□□□ -0.19
VPS60Q03390 YMR090WYMR090W 684 nt13.84□□□□□ -0.19
VPS60Q03390 YBR220CYBR220C 1683 nt13.8□□□□□ -0.2
VPS60Q03390 BDH2YAL061W 1254 nt13.7□□□□□ -0.22
VPS60Q03390 YDL221WYDL221W 552 nt13.69□□□□□ -0.22
VPS60Q03390 FUN26YAL022C 1554 nt13.69□□□□□ -0.22
VPS60Q03390 SRB2YHR041C 633 nt13.68□□□□□ -0.22
VPS60Q03390 SDH1YKL148C 1923 nt13.64□□□□□ -0.23
VPS60Q03390 NVJ2YPR091C 2313 nt13.64□□□□□ -0.23
VPS60Q03390 ALF1YNL148C 765 nt13.64□□□□□ -0.23
VPS60Q03390 RPP2AYOL039W 321 nt13.64□□□□□ -0.23
VPS60Q03390 PTP1YDL230W 1008 nt13.63□□□□□ -0.23
VPS60Q03390 CAC2YML102W 1407 nt13.63□□□□□ -0.23
VPS60Q03390 TRM9YML014W 840 nt13.57□□□□□ -0.24
VPS60Q03390 PCH2YBR186W 1695 nt13.5□□□□□ -0.25
VPS60Q03390 SCC4YER147C 1875 nt13.47□□□□□ -0.25
VPS60Q03390 GUT2YIL155C 1950 nt13.45□□□□□ -0.26
VPS60Q03390 CCT6YDR188W 1641 nt13.45□□□□□ -0.26
VPS60Q03390 SIS1YNL007C 1059 nt13.44□□□□□ -0.26
VPS60Q03390 IRC15YPL017C 1500 nt13.43□□□□□ -0.26
VPS60Q03390 SEC11YIR022W 504 nt13.42□□□□□ -0.26
VPS60Q03390 LSM3YLR438C-A 270 nt13.42□□□□□ -0.26
VPS60Q03390 SUF2tP(AGG)C 72 nt13.4□□□□□ -0.26
VPS60Q03390 SUF10tP(AGG)N 72 nt13.4□□□□□ -0.26
VPS60Q03390 WWM1YFL010C 636 nt13.38□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms