RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	TY1A-GR2	Q12485	440 aa		6.67	□□□□□ -1.34
YLR224W	YLR224W	DSF2	P38213	736 aa		6.66	□□□□□ -1.34
YLR224W	YLR224W	ERF2	Q06551	359 aa		6.66	□□□□□ -1.34
YLR224W	YLR224W	NUP42	P49686	430 aa	Known RBP	6.65	□□□□□ -1.34
YLR224W	YLR224W	DIT2	P21595	489 aa		6.64	□□□□□ -1.35
YLR224W	YLR224W	IES2	P40154	320 aa		6.64	□□□□□ -1.35
YLR224W	YLR224W	MAM3	Q12296	706 aa		6.64	□□□□□ -1.35
YLR224W	YLR224W	PRT1	P06103	763 aa	Known RBP	6.63	□□□□□ -1.35
YLR224W	YLR224W	GCD11	P32481	527 aa	Known RBP	6.62	□□□□□ -1.35
YLR224W	YLR224W	SPB4	P25808	606 aa	Predicted RBP	6.61	□□□□□ -1.35
YLR224W	YLR224W	KEX2	P13134	814 aa		6.6	□□□□□ -1.35
YLR224W	YLR224W	PSE1	P32337	1089 aa	Known RBP	6.6	□□□□□ -1.35
YLR224W	YLR224W	SAS4	Q04003	481 aa		6.6	□□□□□ -1.35
YLR224W	YLR224W	AMS1	P22855	1083 aa		6.58	□□□□□ -1.36
YLR224W	YLR224W	NPL4	P33755	580 aa		6.57	□□□□□ -1.36
YLR224W	YLR224W	CST6	P40535	587 aa		6.55	□□□□□ -1.36
YLR224W	YLR224W	CLA4	P48562	842 aa		6.54	□□□□□ -1.36
YLR224W	YLR224W	RRN7	P40992	514 aa		6.53	□□□□□ -1.36
YLR224W	YLR224W	PAC1	P39946	494 aa	Known RBP	6.5	□□□□□ -1.37
YLR224W	YLR224W	NIS1	P53939	407 aa		6.5	□□□□□ -1.37
YLR224W	YLR224W	AGE1	Q04412	482 aa		6.5	□□□□□ -1.37
YLR224W	YLR224W	SIT4	P20604	311 aa		6.48	□□□□□ -1.37
YLR224W	YLR224W	MRF1	P30775	413 aa	Predicted RBP	6.48	□□□□□ -1.37
YLR224W	YLR224W	SPT16	P32558	1035 aa	Known RBP	6.48	□□□□□ -1.37
YLR224W	YLR224W	AIR1	P40507	360 aa	Known RBP	6.48	□□□□□ -1.37
YLR224W	YLR224W	TEA1	P47988	759 aa		6.48	□□□□□ -1.37
YLR224W	YLR224W	YEL077C	Q3E7X8	1277 aa		6.48	□□□□□ -1.37
YLR224W	YLR224W	LAM6	Q08001	693 aa		6.47	□□□□□ -1.37
YLR224W	YLR224W	ERG12	P07277	443 aa		6.46	□□□□□ -1.38
YLR224W	YLR224W	SCJ1	P25303	377 aa		6.46	□□□□□ -1.38
YLR224W	YLR224W	TUB4	P53378	473 aa		6.46	□□□□□ -1.38
YLR224W	YLR224W	BDP1	P46678	594 aa		6.45	□□□□□ -1.38
YLR224W	YLR224W	FRK1	Q03002	865 aa	Predicted RBP	6.45	□□□□□ -1.38
YLR224W	YLR224W	FPK1	P53739	893 aa		6.44	□□□□□ -1.38
YLR224W	YLR224W	YNL115C	P53925	644 aa		6.44	□□□□□ -1.38
YLR224W	YLR224W	CLB5	P30283	435 aa		6.43	□□□□□ -1.38
YLR224W	YLR224W	MOD5	P07884	428 aa		6.42	□□□□□ -1.38
YLR224W	YLR224W	GLC3	P32775	704 aa		6.42	□□□□□ -1.38
YLR224W	YLR224W	TRK1	P12685	1235 aa		6.41	□□□□□ -1.38
YLR224W	YLR224W	RTF1	P53064	558 aa		6.39	□□□□□ -1.39
YLR224W	YLR224W	PUS5	Q06244	254 aa		6.39	□□□□□ -1.39
YLR224W	YLR224W	SLY41	P22215	453 aa		6.38	□□□□□ -1.39
YLR224W	YLR224W	PAT1	P25644	796 aa	Known RBP	6.37	□□□□□ -1.39
YLR224W	YLR224W	TYW1	Q08960	810 aa	Known RBP	6.37	□□□□□ -1.39
YLR224W	YLR224W	ATF2	P53296	535 aa		6.35	□□□□□ -1.39
YLR224W	YLR224W	YNR021W	P53723	404 aa	Known RBP	6.35	□□□□□ -1.39
YLR224W	YLR224W	ESS1	P22696	170 aa		6.33	□□□□□ -1.4
YLR224W	YLR224W	KTR1	P27810	393 aa	Known RBP	6.33	□□□□□ -1.4
YLR224W	YLR224W	HST2	P53686	357 aa		6.33	□□□□□ -1.4
YLR224W	YLR224W	YMR196W	Q04336	1088 aa		6.33	□□□□□ -1.4
YLR224W	YLR224W	PDC1	P06169	563 aa	Known RBP	6.32	□□□□□ -1.4
YLR224W	YLR224W	YJU3	P28321	313 aa		6.32	□□□□□ -1.4
YLR224W	YLR224W	MET32	Q12041	191 aa		6.31	□□□□□ -1.4
YLR224W	YLR224W	MMP1	Q12372	583 aa		6.31	□□□□□ -1.4
YLR224W	YLR224W	HED1	Q03937	162 aa		6.3	□□□□□ -1.4
YLR224W	YLR224W	CDC4	P07834	779 aa		6.29	□□□□□ -1.4
YLR224W	YLR224W	TRM1	P15565	570 aa	Known RBP	6.29	□□□□□ -1.4
YLR224W	YLR224W	HXT10	P43581	546 aa		6.29	□□□□□ -1.4
YLR224W	YLR224W	PUS6	P53294	404 aa		6.29	□□□□□ -1.4
YLR224W	YLR224W	YDL206W	Q12424	762 aa		6.28	□□□□□ -1.4
YLR224W	YLR224W	GLN1	P32288	370 aa	Known RBP	6.26	□□□□□ -1.41
YLR224W	YLR224W	RSC30	P38781	883 aa		6.26	□□□□□ -1.41
YLR224W	YLR224W	KXD1	P53158	218 aa		6.26	□□□□□ -1.41
YLR224W	YLR224W	TPD3	P31383	635 aa		6.25	□□□□□ -1.41
YLR224W	YLR224W	GCR2	Q01722	534 aa		6.25	□□□□□ -1.41
YLR224W	YLR224W	ASH1	P34233	588 aa		6.24	□□□□□ -1.41
YLR224W	YLR224W	RRD1	P40454	393 aa	Known RBP	6.24	□□□□□ -1.41
YLR224W	YLR224W	BRE2	P43132	505 aa		6.24	□□□□□ -1.41
YLR224W	YLR224W	RPA14	P50106	137 aa		6.24	□□□□□ -1.41
YLR224W	YLR224W	ITT1	Q04638	464 aa		6.23	□□□□□ -1.41
YLR224W	YLR224W	YPR097W	Q06839	1073 aa		6.23	□□□□□ -1.41
YLR224W	YLR224W	AIM7	Q12156	149 aa		6.23	□□□□□ -1.41
YLR224W	YLR224W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
YLR224W	YLR224W	LEU3	P08638	886 aa		6.21	□□□□□ -1.42
YLR224W	YLR224W	RGA1	P39083	1007 aa		6.21	□□□□□ -1.42
YLR224W	YLR224W	CSN12	P47130	423 aa		6.21	□□□□□ -1.42
YLR224W	YLR224W	PKH3	Q03306	898 aa	Predicted RBP	6.21	□□□□□ -1.42
YLR224W	YLR224W	TBF1	Q02457	562 aa		6.2	□□□□□ -1.42
YLR224W	YLR224W	ALR1	Q08269	859 aa		6.19	□□□□□ -1.42
YLR224W	YLR224W	KIN1	P13185	1064 aa		6.18	□□□□□ -1.42
YLR224W	YLR224W	AFT1	P22149	690 aa		6.17	□□□□□ -1.42
YLR224W	YLR224W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.16	□□□□□ -1.42	not detected
YLR224W	YLR224W	MET22	P32179	357 aa		6.16	□□□□□ -1.42
YLR224W	YLR224W	ARG8	P18544	423 aa		6.15	□□□□□ -1.42
YLR224W	YLR224W	GAR1	P28007	205 aa	Known RBP	6.15	□□□□□ -1.42
YLR224W	YLR224W	YJR115W	P47152	169 aa		6.15	□□□□□ -1.42
YLR224W	YLR224W	SYH1	Q02875	849 aa	Known RBP	6.15	□□□□□ -1.42
YLR224W	YLR224W	KIP2	P28743	706 aa		6.14	□□□□□ -1.43
YLR224W	YLR224W	GUA1	P38625	525 aa	Known RBP	6.14	□□□□□ -1.43
YLR224W	YLR224W	RAD59	Q12223	238 aa		6.14	□□□□□ -1.43
YLR224W	YLR224W	IXR1	P33417	597 aa		6.13	□□□□□ -1.43
YLR224W	YLR224W	HST3	P53687	447 aa		6.13	□□□□□ -1.43
YLR224W	YLR224W	VAC17	P25591	423 aa		6.12	□□□□□ -1.43
YLR224W	YLR224W	RGA2	Q06407	1009 aa		6.12	□□□□□ -1.43
YLR224W	YLR224W	MRT4	P33201	236 aa	Known RBP	6.1	□□□□□ -1.43
YLR224W	YLR224W	FIG4	P42837	879 aa		6.09	□□□□□ -1.43
YLR224W	YLR224W	APP1	P53933	587 aa		6.09	□□□□□ -1.43
YLR224W	YLR224W	ENV9	Q08651	330 aa		6.08	□□□□□ -1.44
YLR224W	YLR224W	YPL062W	Q02781	134 aa		6.07	□□□□□ -1.44
YLR224W	YLR224W	RPN1	P38764	993 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms