RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	MTC1	P47018	478 aa	Known RBP	12.62	□□□□□ -0.39
YLR224W	YLR224W	DRS1	P32892	752 aa	Known RBP	11.88	□□□□□ -0.51
YLR224W	YLR224W	FAP1	P53971	965 aa		11.25	□□□□□ -0.61
YLR224W	YLR224W	PRI1	P10363	409 aa		10.61	□□□□□ -0.71
YLR224W	YLR224W	PRY3	P47033	881 aa		10.61	□□□□□ -0.71
YLR224W	YLR224W	AAD16	Q02895	342 aa		10.51	□□□□□ -0.73
YLR224W	YLR224W	DIP2	Q12220	943 aa	Predicted RBP	10.4	□□□□□ -0.74
YLR224W	YLR224W	RPG1	P38249	964 aa	Known RBP	10.38	□□□□□ -0.75
YLR224W	YLR224W	ISW2	Q08773	1120 aa		10.36	□□□□□ -0.75
YLR224W	YLR224W	YCK3	P39962	524 aa		10.21	□□□□□ -0.77
YLR224W	YLR224W	TSR3	Q12094	313 aa	Known RBP	10.09	□□□□□ -0.79
YLR224W	YLR224W	AVT3	P36062	692 aa		10.07	□□□□□ -0.8
YLR224W	YLR224W	RSE1	Q04693	1361 aa	Known RBP	9.98	□□□□□ -0.81
YLR224W	YLR224W	BFR2	Q06631	534 aa	Known RBP	9.89	□□□□□ -0.83
YLR224W	YLR224W	HAA1	Q12753	694 aa	Known RBP	9.87	□□□□□ -0.83
YLR224W	YLR224W	RPL17A	P05740	184 aa	Known RBP	9.72	□□□□□ -0.85
YLR224W	YLR224W	RPL17B	P46990	184 aa	Known RBP	9.72	□□□□□ -0.85
YLR224W	YLR224W	REB1	P21538	810 aa		9.59	□□□□□ -0.87
YLR224W	YLR224W	MRPL32	P25348	183 aa		9.58	□□□□□ -0.88
YLR224W	YLR224W	SPT21	P35209	758 aa		9.32	□□□□□ -0.92
YLR224W	YLR224W	CDC27	P38042	758 aa		9.26	□□□□□ -0.93
YLR224W	YLR224W	YKR023W	P36119	530 aa	Known RBP	9.25	□□□□□ -0.93
YLR224W	YLR224W	YGL015C	P33199	130 aa		9.15	□□□□□ -0.94
YLR224W	YLR224W	DCD1	P06773	312 aa		9.07	□□□□□ -0.96
YLR224W	YLR224W	HO	P09932	586 aa		9.06	□□□□□ -0.96
YLR224W	YLR224W	RIM101	P33400	625 aa		9.01	□□□□□ -0.97
YLR224W	YLR224W	TFC8	Q12308	588 aa		9	□□□□□ -0.97
YLR224W	YLR224W	MAP2	P38174	421 aa	Known RBP	8.92	□□□□□ -0.98
YLR224W	YLR224W	UBP10	P53874	792 aa	Predicted RBP	8.8	□□□□□ -1
YLR224W	YLR224W	OXP1	P28273	1286 aa		8.79	□□□□□ -1
YLR224W	YLR224W	TFA1	P36100	482 aa		8.76	□□□□□ -1.01
YLR224W	YLR224W	BCH2	P36122	765 aa		8.74	□□□□□ -1.01
YLR224W	YLR224W	SCY1	P53009	804 aa		8.73	□□□□□ -1.01
YLR224W	YLR224W	SLX5	P32828	619 aa	Known RBP	8.54	□□□□□ -1.04
YLR224W	YLR224W	PTP3	P40048	928 aa		8.5	□□□□□ -1.05
YLR224W	YLR224W	YIL055C	P40523	627 aa	Known RBP	8.5	□□□□□ -1.05
YLR224W	YLR224W	EPS1	P40557	701 aa		8.5	□□□□□ -1.05
YLR224W	YLR224W	YAH1	Q12184	172 aa	Known RBP	8.49	□□□□□ -1.05
YLR224W	YLR224W	BDF1	P35817	686 aa		8.47	□□□□□ -1.05
YLR224W	YLR224W	TGL3	P40308	642 aa		8.42	□□□□□ -1.06
YLR224W	YLR224W	RSM7	P47150	247 aa		8.42	□□□□□ -1.06
YLR224W	YLR224W	TIF4632	P39936	914 aa	Known RBP	8.4	□□□□□ -1.06
YLR224W	YLR224W	BUD31	P25337	157 aa	Predicted RBP	8.38	□□□□□ -1.07
YLR224W	YLR224W	YLR271W	Q06152	274 aa		8.36	□□□□□ -1.07
YLR224W	YLR224W	AI2	P03876	854 aa		8.35	□□□□□ -1.07
YLR224W	YLR224W	BBC1	P47068	1157 aa		8.24	□□□□□ -1.09
YLR224W	YLR224W	UBP9	P39967	754 aa		8.21	□□□□□ -1.1
YLR224W	YLR224W	SSP1	P38871	571 aa		8.2	□□□□□ -1.1
YLR224W	YLR224W	PSD2	P53037	1138 aa	Known RBP	8.18	□□□□□ -1.1
YLR224W	YLR224W	MST1	P07236	462 aa		8.11	□□□□□ -1.11
YLR224W	YLR224W	CST9	Q06032	482 aa		8.09	□□□□□ -1.11
YLR224W	YLR224W	MRM1	P25270	412 aa		8.08	□□□□□ -1.12
YLR224W	YLR224W	YOR238W	Q08634	303 aa		8.06	□□□□□ -1.12
YLR224W	YLR224W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	8.04	□□□□□ -1.12	not detected
YLR224W	YLR224W	SIS1	P25294	352 aa	Known RBP	8.03	□□□□□ -1.12
YLR224W	YLR224W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	8.02	□□□□□ -1.13	not detected
YLR224W	YLR224W	YBL029C-A	Q3E756	94 aa		8.01	□□□□□ -1.13
YLR224W	YLR224W	YAP5	P40574	245 aa		8	□□□□□ -1.13
YLR224W	YLR224W	PIB1	Q06651	286 aa		7.99	□□□□□ -1.13
YLR224W	YLR224W	MGA2	P40578	1113 aa		7.96	□□□□□ -1.14
YLR224W	YLR224W	VPS29	P38759	282 aa		7.93	□□□□□ -1.14
YLR224W	YLR224W	RCR1	P38212	213 aa		7.92	□□□□□ -1.14
YLR224W	YLR224W	VNX1	P42839	908 aa		7.92	□□□□□ -1.14
YLR224W	YLR224W	WSC3	Q12215	556 aa		7.91	□□□□□ -1.14
YLR224W	YLR224W	YFR006W	P43590	535 aa		7.86	□□□□□ -1.15
YLR224W	YLR224W	RTG3	P38165	486 aa		7.85	□□□□□ -1.15
YLR224W	YLR224W	STS1	P38637	319 aa		7.83	□□□□□ -1.16
YLR224W	YLR224W	DBP1	P24784	617 aa	Known RBP	7.82	□□□□□ -1.16
YLR224W	YLR224W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.8	□□□□□ -1.16	not detected
YLR224W	YLR224W	SPP1	Q03012	353 aa		7.8	□□□□□ -1.16
YLR224W	YLR224W	GTT3	P39996	337 aa		7.79	□□□□□ -1.16
YLR224W	YLR224W	TIF11	P38912	153 aa	Known RBP	7.74	□□□□□ -1.17
YLR224W	YLR224W	VMA1	P17255	1071 aa	Known RBP	7.7	□□□□□ -1.18
YLR224W	YLR224W	IOC2	Q12072	812 aa		7.7	□□□□□ -1.18
YLR224W	YLR224W	SET4	P42948	560 aa		7.68	□□□□□ -1.18
YLR224W	YLR224W	ULI1	P43604	169 aa		7.68	□□□□□ -1.18
YLR224W	YLR224W	YOL036W	Q08206	761 aa		7.68	□□□□□ -1.18
YLR224W	YLR224W	RAM2	P29703	316 aa		7.66	□□□□□ -1.18
YLR224W	YLR224W	AIR2	Q12476	344 aa	Known RBP	7.65	□□□□□ -1.18
YLR224W	YLR224W	LDB19	Q12502	818 aa		7.64	□□□□□ -1.19
YLR224W	YLR224W	SAM3	Q08986	587 aa		7.63	□□□□□ -1.19
YLR224W	YLR224W	TRP5	P00931	707 aa	Known RBP	7.61	□□□□□ -1.19
YLR224W	YLR224W	FKH1	P40466	484 aa		7.61	□□□□□ -1.19
YLR224W	YLR224W	MSB4	Q12317	492 aa		7.59	□□□□□ -1.19
YLR224W	YLR224W	EDS1	P38073	919 aa		7.55	□□□□□ -1.2
YLR224W	YLR224W	YJL171C	P46992	396 aa		7.55	□□□□□ -1.2
YLR224W	YLR224W	GYP5	Q12344	894 aa		7.53	□□□□□ -1.2
YLR224W	YLR224W	EAP1	P36041	632 aa	Known RBP	7.52	□□□□□ -1.21
YLR224W	YLR224W	MAK11	P20484	414 aa	Known RBP	7.51	□□□□□ -1.21
YLR224W	YLR224W	RTG1	P32607	177 aa		7.51	□□□□□ -1.21
YLR224W	YLR224W	DCW1	P36091	449 aa		7.51	□□□□□ -1.21
YLR224W	YLR224W	MIF2	P35201	549 aa		7.5	□□□□□ -1.21
YLR224W	YLR224W	COQ8	P27697	501 aa		7.46	□□□□□ -1.22
YLR224W	YLR224W	PTC3	P34221	468 aa	Known RBP	7.46	□□□□□ -1.22
YLR224W	YLR224W	DAN4	P47179	1161 aa		7.46	□□□□□ -1.22
YLR224W	YLR224W	YNL035C	P53962	389 aa	Known RBP	7.46	□□□□□ -1.22
YLR224W	YLR224W	NCR1	Q12200	1170 aa		7.44	□□□□□ -1.22
YLR224W	YLR224W	HTA1	P04911	132 aa	Known RBP	7.41	□□□□□ -1.22
YLR224W	YLR224W	HTA2	P04912	132 aa		7.41	□□□□□ -1.22
YLR224W	YLR224W	SOL3	P38858	249 aa		7.41	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms