RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	KNS1	P32350	737 aa	Predicted RBP	5.78	□□□□□ -1.48
CLF1	YLR117C	SWE1	P32944	819 aa		5.78	□□□□□ -1.48
CLF1	YLR117C	VPS24	P36095	224 aa	Known RBP	5.78	□□□□□ -1.48
CLF1	YLR117C	VPS4	P52917	437 aa		5.78	□□□□□ -1.48
CLF1	YLR117C	YNL011C	P53980	444 aa		5.78	□□□□□ -1.48
CLF1	YLR117C	GEA1	P47102	1408 aa	Predicted RBP	5.77	□□□□□ -1.49
CLF1	YLR117C	ARL1	P38116	183 aa	Known RBP	5.77	□□□□□ -1.49
CLF1	YLR117C	RPO21	P04050	1733 aa	Known RBP	5.77	□□□□□ -1.49
CLF1	YLR117C	SNT2	P53127	1403 aa		5.77	□□□□□ -1.49
CLF1	YLR117C	SIC1	P38634	284 aa		5.76	□□□□□ -1.49
CLF1	YLR117C	MSH4	P40965	878 aa	Predicted RBP	5.76	□□□□□ -1.49
CLF1	YLR117C	PIL1	P53252	339 aa	Known RBP	5.76	□□□□□ -1.49
CLF1	YLR117C	KIP3	P53086	805 aa	Known RBP	5.76	□□□□□ -1.49
CLF1	YLR117C	CLB5	P30283	435 aa		5.75	□□□□□ -1.49
CLF1	YLR117C	TRM3	Q07527	1436 aa		5.75	□□□□□ -1.49
CLF1	YLR117C	MSH3	P25336	1018 aa		5.75	□□□□□ -1.49
CLF1	YLR117C	DSN1	P40568	576 aa		5.75	□□□□□ -1.49
CLF1	YLR117C	CDC45	Q08032	650 aa		5.75	□□□□□ -1.49
CLF1	YLR117C	HO	P09932	586 aa		5.74	□□□□□ -1.49
CLF1	YLR117C	RPN1	P38764	993 aa	Known RBP	5.74	□□□□□ -1.49
CLF1	YLR117C	UBP10	P53874	792 aa	Predicted RBP	5.74	□□□□□ -1.49
CLF1	YLR117C	PRP3	Q03338	469 aa	Predicted RBP	5.74	□□□□□ -1.49
CLF1	YLR117C	RVB2	Q12464	471 aa	Known RBP	5.74	□□□□□ -1.49
CLF1	YLR117C	BYE1	P36106	594 aa		5.73	□□□□□ -1.49
CLF1	YLR117C	IFH1	P39520	1085 aa		5.73	□□□□□ -1.49
CLF1	YLR117C	VPS27	P40343	622 aa	Known RBP	5.73	□□□□□ -1.49
CLF1	YLR117C	TFC8	Q12308	588 aa		5.73	□□□□□ -1.49
CLF1	YLR117C	DCD1	P06773	312 aa		5.72	□□□□□ -1.49
CLF1	YLR117C	MAP2	P38174	421 aa	Known RBP	5.72	□□□□□ -1.49
CLF1	YLR117C	MED8	P38304	223 aa		5.72	□□□□□ -1.49
CLF1	YLR117C	TPM2	P40414	161 aa		5.72	□□□□□ -1.49
CLF1	YLR117C	RPP0	P05317	312 aa	Known RBP	5.71	□□□□□ -1.49
CLF1	YLR117C	CHZ1	P40019	153 aa	Predicted RBP	5.71	□□□□□ -1.49
CLF1	YLR117C	DOS2	P54858	310 aa		5.71	□□□□□ -1.49
CLF1	YLR117C	ETT1	Q08421	412 aa	Known RBP	5.71	□□□□□ -1.49
CLF1	YLR117C	BMS1	Q08965	1183 aa	Known RBP	5.71	□□□□□ -1.49
CLF1	YLR117C	LSP1	Q12230	341 aa	Known RBP	5.71	□□□□□ -1.49
CLF1	YLR117C	TY3B-G	Q99315	1547 aa		5.71	□□□□□ -1.49
CLF1	YLR117C	GEA2	P39993	1459 aa	Known RBP	5.71	□□□□□ -1.5
CLF1	YLR117C	ECM1	P39715	212 aa		5.71	□□□□□ -1.5
CLF1	YLR117C	PDR5	P33302	1511 aa	Known RBP	5.7	□□□□□ -1.5
CLF1	YLR117C	CIN4	P39110	191 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	TEA1	P47988	759 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	NNF2	P53253	936 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	NUP157	P40064	1391 aa	Known RBP	5.7	□□□□□ -1.5
CLF1	YLR117C	YBT1	P32386	1661 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	RAD2	P07276	1031 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	NST1	P53935	1240 aa		5.7	□□□□□ -1.5
CLF1	YLR117C	TCD1	P38756	429 aa		5.69	□□□□□ -1.5
CLF1	YLR117C	VPS60	Q03390	229 aa		5.69	□□□□□ -1.5
CLF1	YLR117C	YRF1-1	P0CX20	1796 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	YRF1-5	P0CX21	1796 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	YRF1-8	P0CX22	1796 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	MET5	P47169	1442 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	LTV1	P34078	463 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	ORC1	P54784	914 aa	Predicted RBP	5.68	□□□□□ -1.5
CLF1	YLR117C	PDS5	Q04264	1277 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	VPS15	P22219	1454 aa		5.68	□□□□□ -1.5
CLF1	YLR117C	TAN1	P53072	289 aa	Predicted RBP	5.68	□□□□□ -1.5
CLF1	YLR117C	NOP14	Q99207	810 aa	Known RBP	5.68	□□□□□ -1.5
CLF1	YLR117C	SRP54	P20424	541 aa	Known RBP	5.67	□□□□□ -1.5
CLF1	YLR117C	CLB1	P24868	471 aa		5.67	□□□□□ -1.5
CLF1	YLR117C	DEP1	P31385	405 aa		5.67	□□□□□ -1.5
CLF1	YLR117C	GRX3	Q03835	250 aa		5.67	□□□□□ -1.5
CLF1	YLR117C	ESC2	Q06340	456 aa		5.67	□□□□□ -1.5
CLF1	YLR117C	HOS3	Q02959	697 aa	Known RBP	5.67	□□□□□ -1.5
CLF1	YLR117C	ECM16	Q04217	1267 aa	Known RBP	5.67	□□□□□ -1.5
CLF1	YLR117C	LCD1	Q04377	747 aa		5.67	□□□□□ -1.5
CLF1	YLR117C	RPN7	Q06103	429 aa	Known RBP	5.67	□□□□□ -1.5
CLF1	YLR117C	RNT1	Q02555	471 aa		5.66	□□□□□ -1.5
CLF1	YLR117C	RLP24	Q07915	199 aa	Known RBP	5.66	□□□□□ -1.5
CLF1	YLR117C	NOP8	Q08287	484 aa	Predicted RBP	5.65	□□□□□ -1.5
CLF1	YLR117C	CAT8	P39113	1433 aa		5.65	□□□□□ -1.5
CLF1	YLR117C	SPO14	P36126	1683 aa		5.65	□□□□□ -1.5
CLF1	YLR117C	RIM101	P33400	625 aa		5.65	□□□□□ -1.51
CLF1	YLR117C	RSC1	P53236	928 aa		5.65	□□□□□ -1.51
CLF1	YLR117C	PDR12	Q02785	1511 aa		5.65	□□□□□ -1.51
CLF1	YLR117C	GDB1	Q06625	1536 aa		5.64	□□□□□ -1.51
CLF1	YLR117C	RAD9	P14737	1309 aa		5.64	□□□□□ -1.51
CLF1	YLR117C	SAP190	P36123	1033 aa		5.64	□□□□□ -1.51
CLF1	YLR117C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
CLF1	YLR117C	NOP7	P53261	605 aa	Known RBP	5.63	□□□□□ -1.51
CLF1	YLR117C	MCM2	P29469	868 aa		5.63	□□□□□ -1.51
CLF1	YLR117C	SWI3	P32591	825 aa		5.63	□□□□□ -1.51
CLF1	YLR117C	UTP13	Q05946	817 aa	Known RBP	5.63	□□□□□ -1.51
CLF1	YLR117C	YOL087C	Q99247	1116 aa		5.63	□□□□□ -1.51
CLF1	YLR117C	SPB4	P25808	606 aa	Predicted RBP	5.62	□□□□□ -1.51
CLF1	YLR117C	PAP2	P53632	584 aa	Known RBP	5.62	□□□□□ -1.51
CLF1	YLR117C	HAP5	Q02516	242 aa		5.62	□□□□□ -1.51
CLF1	YLR117C	VPS72	Q03388	795 aa		5.62	□□□□□ -1.51
CLF1	YLR117C	ARO1	P08566	1588 aa	Known RBP	5.62	□□□□□ -1.51
CLF1	YLR117C	RAD51	P25454	400 aa		5.61	□□□□□ -1.51
CLF1	YLR117C	MET10	P39692	1035 aa		5.61	□□□□□ -1.51
CLF1	YLR117C	ITC1	P53125	1264 aa		5.61	□□□□□ -1.51
CLF1	YLR117C	MDG1	P53885	366 aa		5.61	□□□□□ -1.51
CLF1	YLR117C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.61	□□□□□ -1.51
CLF1	YLR117C	RKM3	P38222	552 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	SCY1	P53009	804 aa		5.6	□□□□□ -1.51
CLF1	YLR117C	YSH1	Q06224	779 aa	Predicted RBP	5.6	□□□□□ -1.51
CLF1	YLR117C	SUI2	P20459	304 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms