RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W TY1A-ML1Q04706 440 aaKnown RBP4.09□□□□□ -1.75
CFT2YLR115W TY1A-BRQ12217 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-NL2Q12470 440 aa4.09□□□□□ -1.75
CFT2YLR115W TY1A-GR2Q12485 440 aa4.09□□□□□ -1.75
CFT2YLR115W PRT1P06103 763 aaKnown RBP4.07□□□□□ -1.76
CFT2YLR115W SAS4Q04003 481 aa4.07□□□□□ -1.76
CFT2YLR115W GYP1Q08484 637 aa4.07□□□□□ -1.76
CFT2YLR115W DPS1P04802 557 aaKnown RBP4.06□□□□□ -1.76
CFT2YLR115W ERF2Q06551 359 aa4.06□□□□□ -1.76
CFT2YLR115W CLB5P30283 435 aa4.05□□□□□ -1.76
CFT2YLR115W RAS1P01119 309 aa4.04□□□□□ -1.76
CFT2YLR115W KEX2P13134 814 aa4.04□□□□□ -1.76
CFT2YLR115W TEA1P47988 759 aa4.04□□□□□ -1.76
CFT2YLR115W NIS1P53939 407 aa4.04□□□□□ -1.76
CFT2YLR115W SIT4P20604 311 aa4.04□□□□□ -1.76
CFT2YLR115W NPL4P33755 580 aa4.04□□□□□ -1.76
CFT2YLR115W YNR021WP53723 404 aaKnown RBP4.03□□□□□ -1.76
CFT2YLR115W GCD11P32481 527 aaKnown RBP4.03□□□□□ -1.77
CFT2YLR115W SRC1Q03707 834 aa4.03□□□□□ -1.77
CFT2YLR115W AGE1Q04412 482 aa4.02□□□□□ -1.77
CFT2YLR115W AMS1P22855 1083 aa4.01□□□□□ -1.77
CFT2YLR115W GLC3P32775 704 aa4.01□□□□□ -1.77
CFT2YLR115W LEU3P08638 886 aa4.01□□□□□ -1.77
CFT2YLR115W RTF1P53064 558 aa4□□□□□ -1.77
CFT2YLR115W MRF1P30775 413 aaPredicted RBP4□□□□□ -1.77
CFT2YLR115W FPK1P53739 893 aa4□□□□□ -1.77
CFT2YLR115W RRN7P40992 514 aa3.99□□□□□ -1.77
CFT2YLR115W YNL115CP53925 644 aa3.99□□□□□ -1.77
CFT2YLR115W PAC1P39946 494 aaKnown RBP3.99□□□□□ -1.77
CFT2YLR115W CST6P40535 587 aa3.99□□□□□ -1.77
CFT2YLR115W TUB4P53378 473 aa3.99□□□□□ -1.77
CFT2YLR115W AIM7Q12156 149 aa3.98□□□□□ -1.77
CFT2YLR115W MOD5P07884 428 aa3.97□□□□□ -1.77
CFT2YLR115W SPT16P32558 1035 aaKnown RBP3.97□□□□□ -1.77
CFT2YLR115W ATF2P53296 535 aa3.97□□□□□ -1.77
CFT2YLR115W SCJ1P25303 377 aa3.96□□□□□ -1.78
CFT2YLR115W HST2P53686 357 aa3.96□□□□□ -1.78
CFT2YLR115W LAM6Q08001 693 aa3.96□□□□□ -1.78
CFT2YLR115W YEL077CQ3E7X8 1277 aa3.96□□□□□ -1.78
CFT2YLR115W ERG12P07277 443 aa3.96□□□□□ -1.78
CFT2YLR115W KTR1P27810 393 aaKnown RBP3.95□□□□□ -1.78
CFT2YLR115W BDP1P46678 594 aa3.95□□□□□ -1.78
CFT2YLR115W SLY41P22215 453 aa3.94□□□□□ -1.78
CFT2YLR115W CLA4P48562 842 aa3.94□□□□□ -1.78
CFT2YLR115W PAT1P25644 796 aaKnown RBP3.93□□□□□ -1.78
CFT2YLR115W YMR196WQ04336 1088 aa3.93□□□□□ -1.78
CFT2YLR115W TYW1Q08960 810 aaKnown RBP3.93□□□□□ -1.78
CFT2YLR115W AIR1P40507 360 aaKnown RBP3.92□□□□□ -1.78
CFT2YLR115W MMP1Q12372 583 aa3.92□□□□□ -1.78
CFT2YLR115W GLN1P32288 370 aaKnown RBP3.92□□□□□ -1.78
CFT2YLR115W FRK1Q03002 865 aaPredicted RBP3.92□□□□□ -1.78
CFT2YLR115W ESS1P22696 170 aa3.91□□□□□ -1.78
CFT2YLR115W YJU3P28321 313 aa3.91□□□□□ -1.78
CFT2YLR115W RSC30P38781 883 aa3.91□□□□□ -1.78
CFT2YLR115W TPD3P31383 635 aa3.91□□□□□ -1.78
CFT2YLR115W PDC1P06169 563 aaKnown RBP3.9□□□□□ -1.78
CFT2YLR115W KIN1P13185 1064 aa3.9□□□□□ -1.78
CFT2YLR115W TRM1P15565 570 aaKnown RBP3.9□□□□□ -1.78
CFT2YLR115W PUS6P53294 404 aa3.9□□□□□ -1.78
CFT2YLR115W RPN1P38764 993 aaKnown RBP3.9□□□□□ -1.79
CFT2YLR115W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
CFT2YLR115W HXT10P43581 546 aa3.89□□□□□ -1.79
CFT2YLR115W CSN12P47130 423 aa3.89□□□□□ -1.79
CFT2YLR115W YDL206WQ12424 762 aa3.89□□□□□ -1.79
CFT2YLR115W TRK1P12685 1235 aa3.89□□□□□ -1.79
CFT2YLR115W RRD1P40454 393 aaKnown RBP3.89□□□□□ -1.79
CFT2YLR115W RPA14P50106 137 aa3.88□□□□□ -1.79
CFT2YLR115W HED1Q03937 162 aa3.88□□□□□ -1.79
CFT2YLR115W PUS5Q06244 254 aa3.88□□□□□ -1.79
CFT2YLR115W YPR097WQ06839 1073 aa3.88□□□□□ -1.79
CFT2YLR115W KXD1P53158 218 aa3.87□□□□□ -1.79
CFT2YLR115W GUA1P38625 525 aaKnown RBP3.86□□□□□ -1.79
CFT2YLR115W TBF1Q02457 562 aa3.86□□□□□ -1.79
CFT2YLR115W PKH3Q03306 898 aaPredicted RBP3.86□□□□□ -1.79
CFT2YLR115W ALR1Q08269 859 aa3.86□□□□□ -1.79
CFT2YLR115W MET32Q12041 191 aa3.86□□□□□ -1.79
CFT2YLR115W CDC4P07834 779 aa3.85□□□□□ -1.79
CFT2YLR115W RAD59Q12223 238 aa3.84□□□□□ -1.8
CFT2YLR115W ARG8P18544 423 aa3.83□□□□□ -1.8
CFT2YLR115W SSA2P10592 639 aaKnown RBP3.82□□□□□ -1.8
CFT2YLR115W VAC17P25591 423 aa3.82□□□□□ -1.8
CFT2YLR115W SYH1Q02875 849 aaKnown RBP3.82□□□□□ -1.8
CFT2YLR115W AFT1P22149 690 aa3.81□□□□□ -1.8
CFT2YLR115W BRE2P43132 505 aa3.8□□□□□ -1.8
CFT2YLR115W ASH1P34233 588 aa3.8□□□□□ -1.8
CFT2YLR115W HPC2Q01448 625 aa3.8□□□□□ -1.8
CFT2YLR115W MRT4P33201 236 aaKnown RBP3.79□□□□□ -1.8
CFT2YLR115W RGA2Q06407 1009 aa3.79□□□□□ -1.8
CFT2YLR115W FIG4P42837 879 aa3.79□□□□□ -1.8
CFT2YLR115W ITT1Q04638 464 aa3.79□□□□□ -1.8
CFT2YLR115W YPR084WQ06821 456 aa3.79□□□□□ -1.8
CFT2YLR115W MAK16P10962 306 aaPredicted RBP3.78□□□□□ -1.8
CFT2YLR115W KIP2P28743 706 aa3.78□□□□□ -1.8
CFT2YLR115W IXR1P33417 597 aa3.78□□□□□ -1.8
CFT2YLR115W MSB3P48566 633 aaPredicted RBP3.77□□□□□ -1.81
CFT2YLR115W TFB3Q03290 321 aa3.77□□□□□ -1.81
CFT2YLR115W PKC1P24583 1151 aa3.77□□□□□ -1.81
CFT2YLR115W HST3P53687 447 aa3.76□□□□□ -1.81
CFT2YLR115W LEO1P38439 464 aa3.75□□□□□ -1.81
CFT2YLR115W YJR115WP47152 169 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms