RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W MTC1P47018 478 aaKnown RBP7.63□□□□□ -1.19
CFT2YLR115W DRS1P32892 752 aaKnown RBP7.26□□□□□ -1.25
CFT2YLR115W FAP1P53971 965 aa6.62□□□□□ -1.35
CFT2YLR115W PRI1P10363 409 aa6.35□□□□□ -1.39
CFT2YLR115W DIP2Q12220 943 aaPredicted RBP6.32□□□□□ -1.4
CFT2YLR115W AAD16Q02895 342 aa6.25□□□□□ -1.41
CFT2YLR115W ISW2Q08773 1120 aa6.25□□□□□ -1.41
CFT2YLR115W PRY3P47033 881 aa6.23□□□□□ -1.41
CFT2YLR115W RPG1P38249 964 aaKnown RBP6.2□□□□□ -1.42
CFT2YLR115W AVT3P36062 692 aa6.19□□□□□ -1.42
CFT2YLR115W BFR2Q06631 534 aaKnown RBP6.1□□□□□ -1.43
CFT2YLR115W RSE1Q04693 1361 aaKnown RBP6.04□□□□□ -1.44
CFT2YLR115W YCK3P39962 524 aa6□□□□□ -1.45
CFT2YLR115W TSR3Q12094 313 aaKnown RBP5.98□□□□□ -1.45
CFT2YLR115W HAA1Q12753 694 aaKnown RBP5.87□□□□□ -1.47
CFT2YLR115W RPL17AP05740 184 aaKnown RBP5.84□□□□□ -1.47
CFT2YLR115W RPL17BP46990 184 aaKnown RBP5.84□□□□□ -1.47
CFT2YLR115W REB1P21538 810 aa5.78□□□□□ -1.48
CFT2YLR115W MRPL32P25348 183 aa5.71□□□□□ -1.49
CFT2YLR115W SPT21P35209 758 aa5.67□□□□□ -1.5
CFT2YLR115W YKR023WP36119 530 aaKnown RBP5.57□□□□□ -1.52
CFT2YLR115W TFA1P36100 482 aa5.54□□□□□ -1.52
CFT2YLR115W CDC27P38042 758 aa5.53□□□□□ -1.52
CFT2YLR115W RIM101P33400 625 aa5.5□□□□□ -1.53
CFT2YLR115W YGL015CP33199 130 aa5.45□□□□□ -1.54
CFT2YLR115W TFC8Q12308 588 aa5.44□□□□□ -1.54
CFT2YLR115W HOP09932 586 aa5.42□□□□□ -1.54
CFT2YLR115W DCD1P06773 312 aa5.41□□□□□ -1.54
CFT2YLR115W OXP1P28273 1286 aa5.32□□□□□ -1.56
CFT2YLR115W MAP2P38174 421 aaKnown RBP5.32□□□□□ -1.56
CFT2YLR115W UBP10P53874 792 aaPredicted RBP5.32□□□□□ -1.56
CFT2YLR115W BCH2P36122 765 aa5.27□□□□□ -1.57
CFT2YLR115W SCY1P53009 804 aa5.22□□□□□ -1.57
CFT2YLR115W YIL055CP40523 627 aaKnown RBP5.16□□□□□ -1.58
CFT2YLR115W PTP3P40048 928 aa5.16□□□□□ -1.58
CFT2YLR115W SLX5P32828 619 aaKnown RBP5.13□□□□□ -1.59
CFT2YLR115W EPS1P40557 701 aa5.13□□□□□ -1.59
CFT2YLR115W YAH1Q12184 172 aaKnown RBP5.13□□□□□ -1.59
CFT2YLR115W BDF1P35817 686 aa5.12□□□□□ -1.59
CFT2YLR115W RSM7P47150 247 aa5.12□□□□□ -1.59
CFT2YLR115W YLR271WQ06152 274 aa5.1□□□□□ -1.59
CFT2YLR115W BUD31P25337 157 aaPredicted RBP5.08□□□□□ -1.6
CFT2YLR115W AI2P03876 854 aa5.08□□□□□ -1.6
CFT2YLR115W TGL3P40308 642 aa5.08□□□□□ -1.6
CFT2YLR115W TIF4632P39936 914 aaKnown RBP5.06□□□□□ -1.6
CFT2YLR115W SSP1P38871 571 aa5.05□□□□□ -1.6
CFT2YLR115W BBC1P47068 1157 aa5.03□□□□□ -1.6
CFT2YLR115W PSD2P53037 1138 aaKnown RBP5.02□□□□□ -1.61
CFT2YLR115W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
CFT2YLR115W CST9Q06032 482 aa4.94□□□□□ -1.62
CFT2YLR115W NSR1P27476 414 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
CFT2YLR115W MST1P07236 462 aa4.92□□□□□ -1.62
CFT2YLR115W MGA2P40578 1113 aa4.92□□□□□ -1.62
CFT2YLR115W MRM1P25270 412 aa4.9□□□□□ -1.63
CFT2YLR115W YOR238WQ08634 303 aa4.86□□□□□ -1.63
CFT2YLR115W YAP5P40574 245 aa4.85□□□□□ -1.63
CFT2YLR115W RCR1P38212 213 aa4.82□□□□□ -1.64
CFT2YLR115W VPS29P38759 282 aa4.82□□□□□ -1.64
CFT2YLR115W UBP9P39967 754 aa4.82□□□□□ -1.64
CFT2YLR115W SIS1P25294 352 aaKnown RBP4.81□□□□□ -1.64
CFT2YLR115W RTG3P38165 486 aa4.8□□□□□ -1.64
CFT2YLR115W YBL029C-AQ3E756 94 aa4.78□□□□□ -1.64
CFT2YLR115W YMR1P47147 688 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
CFT2YLR115W PIB1Q06651 286 aa4.76□□□□□ -1.65
CFT2YLR115W STS1P38637 319 aa4.76□□□□□ -1.65
CFT2YLR115W DBP1P24784 617 aaKnown RBP4.74□□□□□ -1.65
CFT2YLR115W VNX1P42839 908 aa4.74□□□□□ -1.65
CFT2YLR115W YFR006WP43590 535 aa4.72□□□□□ -1.65
CFT2YLR115W RAM2P29703 316 aa4.7□□□□□ -1.66
CFT2YLR115W WSC3Q12215 556 aa4.7□□□□□ -1.66
CFT2YLR115W GTT3P39996 337 aa4.69□□□□□ -1.66
CFT2YLR115W VMA1P17255 1071 aaKnown RBP4.68□□□□□ -1.66
CFT2YLR115W SPP1Q03012 353 aa4.67□□□□□ -1.66
CFT2YLR115W SAM3Q08986 587 aa4.66□□□□□ -1.66
CFT2YLR115W MAK11P20484 414 aaKnown RBP4.65□□□□□ -1.66
CFT2YLR115W TIF11P38912 153 aaKnown RBP4.65□□□□□ -1.66
CFT2YLR115W YOL036WQ08206 761 aa4.64□□□□□ -1.67
CFT2YLR115W MSB4Q12317 492 aa4.64□□□□□ -1.67
CFT2YLR115W IOC2Q12072 812 aa4.63□□□□□ -1.67
CFT2YLR115W SET4P42948 560 aa4.62□□□□□ -1.67
CFT2YLR115W EDS1P38073 919 aa4.6□□□□□ -1.67
CFT2YLR115W ULI1P43604 169 aa4.6□□□□□ -1.67
CFT2YLR115W LDB19Q12502 818 aa4.59□□□□□ -1.67
CFT2YLR115W TRP5P00931 707 aaKnown RBP4.59□□□□□ -1.68
CFT2YLR115W EAP1P36041 632 aaKnown RBP4.59□□□□□ -1.68
CFT2YLR115W COQ8P27697 501 aa4.58□□□□□ -1.68
CFT2YLR115W FKH1P40466 484 aa4.58□□□□□ -1.68
CFT2YLR115W AIR2Q12476 344 aaKnown RBP4.58□□□□□ -1.68
CFT2YLR115W MIF2P35201 549 aa4.57□□□□□ -1.68
CFT2YLR115W PTC3P34221 468 aaKnown RBP4.57□□□□□ -1.68
CFT2YLR115W GYP5Q12344 894 aa4.57□□□□□ -1.68
CFT2YLR115W ABP1P15891 592 aaKnown RBP4.55□□□□□ -1.68
CFT2YLR115W DAN4P47179 1161 aa4.54□□□□□ -1.68
CFT2YLR115W DCW1P36091 449 aa4.53□□□□□ -1.68
CFT2YLR115W GRE2Q12068 342 aaKnown RBP4.53□□□□□ -1.68
CFT2YLR115W HTA1P04911 132 aaKnown RBP4.52□□□□□ -1.69
CFT2YLR115W HTA2P04912 132 aa4.52□□□□□ -1.69
CFT2YLR115W NST1P53935 1240 aa4.52□□□□□ -1.69
CFT2YLR115W RTG1P32607 177 aa4.52□□□□□ -1.69
CFT2YLR115W YNL035CP53962 389 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 121 ms