RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C TY1A-MR2P0CX69 440 aa5.26□□□□□ -1.57
COF1YLL050C NPL4P33755 580 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-JR2P47099 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-DR1Q03856 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-ML1Q04706 440 aaKnown RBP5.26□□□□□ -1.57
COF1YLL050C TY1A-BRQ12217 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-NL2Q12470 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-GR2Q12485 440 aa5.26□□□□□ -1.57
COF1YLL050C SEC2P17065 759 aa5.25□□□□□ -1.57
COF1YLL050C TFB4Q12004 338 aa5.25□□□□□ -1.57
COF1YLL050C GAP1P19145 602 aaPredicted RBP5.24□□□□□ -1.57
COF1YLL050C GCD11P32481 527 aaKnown RBP5.24□□□□□ -1.57
COF1YLL050C TUM1Q08686 304 aaKnown RBP5.24□□□□□ -1.57
COF1YLL050C CSC1Q06538 782 aa5.22□□□□□ -1.57
COF1YLL050C RRN7P40992 514 aa5.21□□□□□ -1.58
COF1YLL050C ASH1P34233 588 aa5.2□□□□□ -1.58
COF1YLL050C AFT1P22149 690 aa5.19□□□□□ -1.58
COF1YLL050C PAT1P25644 796 aaKnown RBP5.19□□□□□ -1.58
COF1YLL050C RRD1P40454 393 aaKnown RBP5.19□□□□□ -1.58
COF1YLL050C MET32Q12041 191 aa5.19□□□□□ -1.58
COF1YLL050C KIC1P38692 1080 aa5.17□□□□□ -1.58
COF1YLL050C HST3P53687 447 aa5.17□□□□□ -1.58
COF1YLL050C YDR090CQ03193 310 aa5.17□□□□□ -1.58
COF1YLL050C SET1P38827 1080 aaKnown RBP5.14□□□□□ -1.59
COF1YLL050C CAF120P53836 1060 aa5.12□□□□□ -1.59
COF1YLL050C YJR115WP47152 169 aa5.11□□□□□ -1.59
COF1YLL050C TRK2P28584 889 aa5.1□□□□□ -1.59
COF1YLL050C ORC6P38826 435 aa5.09□□□□□ -1.59
COF1YLL050C IFH1P39520 1085 aa5.09□□□□□ -1.59
COF1YLL050C ACO2P39533 789 aa5.09□□□□□ -1.59
COF1YLL050C MOD5P07884 428 aa5.06□□□□□ -1.6
COF1YLL050C YGR035CP53222 116 aa5.06□□□□□ -1.6
COF1YLL050C MVP1P40959 511 aaKnown RBP5.04□□□□□ -1.6
COF1YLL050C PUS5Q06244 254 aa5.04□□□□□ -1.6
COF1YLL050C PAC1P39946 494 aaKnown RBP5.03□□□□□ -1.6
COF1YLL050C MSB3P48566 633 aaPredicted RBP5.03□□□□□ -1.6
COF1YLL050C KEX2P13134 814 aa5.01□□□□□ -1.61
COF1YLL050C YPR109WQ06104 294 aa5.01□□□□□ -1.61
COF1YLL050C OPT2Q06593 877 aa5.01□□□□□ -1.61
COF1YLL050C HPF1Q05164 967 aa5□□□□□ -1.61
COF1YLL050C ERF2Q06551 359 aa5□□□□□ -1.61
COF1YLL050C YLR346CQ06139 101 aa4.99□□□□□ -1.61
COF1YLL050C YIR007WP40566 764 aa4.97□□□□□ -1.61
COF1YLL050C RGR1P19263 1082 aa4.96□□□□□ -1.62
COF1YLL050C REF2P42073 533 aaPredicted RBP4.96□□□□□ -1.62
COF1YLL050C LSB3P43603 459 aaKnown RBP4.96□□□□□ -1.62
COF1YLL050C AGE1Q04412 482 aa4.96□□□□□ -1.62
COF1YLL050C ICP55P40051 511 aa4.95□□□□□ -1.62
COF1YLL050C PTK2P47116 818 aaKnown RBP4.95□□□□□ -1.62
COF1YLL050C YPR204WQ08995 1032 aa4.95□□□□□ -1.62
COF1YLL050C PUS1Q12211 544 aaKnown RBP4.95□□□□□ -1.62
COF1YLL050C GLY1P37303 387 aaKnown RBP4.94□□□□□ -1.62
COF1YLL050C SRF1Q12516 437 aa4.94□□□□□ -1.62
COF1YLL050C UGA3P26370 528 aa4.93□□□□□ -1.62
COF1YLL050C TUB4P53378 473 aa4.93□□□□□ -1.62
COF1YLL050C SCW11P53189 542 aa4.92□□□□□ -1.62
COF1YLL050C NRD1P53617 575 aaKnown RBP RIP-Chip data4.9□□□□□ -1.63not detected
COF1YLL050C SYH1Q02875 849 aaKnown RBP4.9□□□□□ -1.63
COF1YLL050C TY1A-BLQ12266 440 aa4.9□□□□□ -1.63
COF1YLL050C TYW1Q08960 810 aaKnown RBP4.89□□□□□ -1.63
COF1YLL050C MAK21Q12176 1025 aaKnown RBP4.89□□□□□ -1.63
COF1YLL050C MIP1P15801 1254 aa4.88□□□□□ -1.63
COF1YLL050C NUP85P46673 744 aa4.88□□□□□ -1.63
COF1YLL050C COX6P00427 148 aa4.87□□□□□ -1.63
COF1YLL050C TPD3P31383 635 aa4.87□□□□□ -1.63
COF1YLL050C KXD1P53158 218 aa4.86□□□□□ -1.63
COF1YLL050C PHM7Q12252 991 aa4.86□□□□□ -1.63
COF1YLL050C RTF1P53064 558 aa4.85□□□□□ -1.63
COF1YLL050C HXT10P43581 546 aa4.83□□□□□ -1.64
COF1YLL050C YPR148CQ06523 435 aa4.83□□□□□ -1.64
COF1YLL050C DPH6Q12429 685 aa4.83□□□□□ -1.64
COF1YLL050C CLB5P30283 435 aa4.79□□□□□ -1.64
COF1YLL050C MDJ1P35191 511 aa4.79□□□□□ -1.64
COF1YLL050C RTT106P40161 455 aa4.79□□□□□ -1.64
COF1YLL050C YNL115CP53925 644 aa4.79□□□□□ -1.64
COF1YLL050C PDC1P06169 563 aaKnown RBP4.78□□□□□ -1.64
COF1YLL050C MRT4P33201 236 aaKnown RBP4.78□□□□□ -1.64
COF1YLL050C UBP2Q01476 1272 aa4.78□□□□□ -1.64
COF1YLL050C KIP2P28743 706 aa4.77□□□□□ -1.65
COF1YLL050C ROG3P43602 733 aa4.77□□□□□ -1.65
COF1YLL050C LSC2P53312 427 aa4.77□□□□□ -1.65
COF1YLL050C NSG2P53898 299 aa4.75□□□□□ -1.65
COF1YLL050C PSE1P32337 1089 aaKnown RBP4.74□□□□□ -1.65
COF1YLL050C IXR1P33417 597 aa4.74□□□□□ -1.65
COF1YLL050C TY1A-MR1Q04215 440 aa4.74□□□□□ -1.65
COF1YLL050C ARG82P07250 355 aa4.73□□□□□ -1.65
COF1YLL050C AAD14P42884 376 aa4.73□□□□□ -1.65
COF1YLL050C CCT8P47079 568 aaKnown RBP4.73□□□□□ -1.65
COF1YLL050C JJJ3P47138 172 aa4.73□□□□□ -1.65
COF1YLL050C LYS5P50113 272 aa4.73□□□□□ -1.65
COF1YLL050C CCP1P00431 361 aa4.72□□□□□ -1.65
COF1YLL050C SIT4P20604 311 aa4.71□□□□□ -1.66
COF1YLL050C YJR098CP47139 656 aa4.71□□□□□ -1.66
COF1YLL050C VPS70P47161 811 aa4.7□□□□□ -1.66
COF1YLL050C ALR1Q08269 859 aa4.7□□□□□ -1.66
COF1YLL050C TCB1Q12466 1186 aa4.7□□□□□ -1.66
COF1YLL050C DLD1P32891 587 aa4.69□□□□□ -1.66
COF1YLL050C OSH7P38755 437 aa4.69□□□□□ -1.66
COF1YLL050C SBP1P10080 294 aaKnown RBP4.67□□□□□ -1.66
COF1YLL050C YFL066CP43538 392 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms