RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C FAP1P53971 965 aa11.17□□□□□ -0.62
COF1YLL050C MTC1P47018 478 aaKnown RBP10.98□□□□□ -0.65
COF1YLL050C PRY3P47033 881 aa10.54□□□□□ -0.72
COF1YLL050C AAD16Q02895 342 aa9.97□□□□□ -0.81
COF1YLL050C YCK3P39962 524 aa9.9□□□□□ -0.82
COF1YLL050C PRI1P10363 409 aa9.89□□□□□ -0.83
COF1YLL050C HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
COF1YLL050C ISW2Q08773 1120 aa9.36□□□□□ -0.91
COF1YLL050C RPG1P38249 964 aaKnown RBP9.27□□□□□ -0.93
COF1YLL050C TSR3Q12094 313 aaKnown RBP9.27□□□□□ -0.93
COF1YLL050C DRS1P32892 752 aaKnown RBP9.1□□□□□ -0.95
COF1YLL050C MRPL32P25348 183 aa8.93□□□□□ -0.98
COF1YLL050C YGL015CP33199 130 aa8.88□□□□□ -0.99
COF1YLL050C BUD31P25337 157 aaPredicted RBP8.66□□□□□ -1.02
COF1YLL050C RSE1Q04693 1361 aaKnown RBP8.44□□□□□ -1.06
COF1YLL050C DIP2Q12220 943 aaPredicted RBP8.38□□□□□ -1.07
COF1YLL050C REB1P21538 810 aa8.32□□□□□ -1.08
COF1YLL050C CDC27P38042 758 aa8.27□□□□□ -1.09
COF1YLL050C RPL17AP05740 184 aaKnown RBP8.23□□□□□ -1.09
COF1YLL050C RPL17BP46990 184 aaKnown RBP8.23□□□□□ -1.09
COF1YLL050C UBP10P53874 792 aaPredicted RBP8.22□□□□□ -1.09
COF1YLL050C MAP2P38174 421 aaKnown RBP8.15□□□□□ -1.1
COF1YLL050C SIS1P25294 352 aaKnown RBP8.13□□□□□ -1.11
COF1YLL050C UBP9P39967 754 aa7.98□□□□□ -1.13
COF1YLL050C YKR023WP36119 530 aaKnown RBP7.97□□□□□ -1.13
COF1YLL050C TIF4632P39936 914 aaKnown RBP7.89□□□□□ -1.15
COF1YLL050C TGL3P40308 642 aa7.86□□□□□ -1.15
COF1YLL050C SPT21P35209 758 aa7.81□□□□□ -1.16
COF1YLL050C TFC8Q12308 588 aa7.81□□□□□ -1.16
COF1YLL050C DCD1P06773 312 aa7.8□□□□□ -1.16
COF1YLL050C HOP09932 586 aa7.8□□□□□ -1.16
COF1YLL050C SCY1P53009 804 aa7.78□□□□□ -1.16
COF1YLL050C SLX5P32828 619 aaKnown RBP7.76□□□□□ -1.17
COF1YLL050C AVT3P36062 692 aa7.76□□□□□ -1.17
COF1YLL050C BCH2P36122 765 aa7.51□□□□□ -1.21
COF1YLL050C YBL029C-AQ3E756 94 aa7.46□□□□□ -1.22
COF1YLL050C MST1P07236 462 aa7.4□□□□□ -1.22
COF1YLL050C VNX1P42839 908 aa7.32□□□□□ -1.24
COF1YLL050C YOR238WQ08634 303 aa7.3□□□□□ -1.24
COF1YLL050C RIM101P33400 625 aa7.27□□□□□ -1.25
COF1YLL050C SPP1Q03012 353 aa7.26□□□□□ -1.25
COF1YLL050C BDF1P35817 686 aa7.25□□□□□ -1.25
COF1YLL050C EPS1P40557 701 aa7.24□□□□□ -1.25
COF1YLL050C YJL171CP46992 396 aa7.23□□□□□ -1.25
COF1YLL050C AIR2Q12476 344 aaKnown RBP7.23□□□□□ -1.25
COF1YLL050C NSR1P27476 414 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
COF1YLL050C FKH1P40466 484 aa7.19□□□□□ -1.26
COF1YLL050C WSC3Q12215 556 aa7.16□□□□□ -1.26
COF1YLL050C TIF11P38912 153 aaKnown RBP7.11□□□□□ -1.27
COF1YLL050C YAP5P40574 245 aa7.11□□□□□ -1.27
COF1YLL050C BMT6Q12291 365 aa7.04□□□□□ -1.28
COF1YLL050C BFR2Q06631 534 aaKnown RBP7.02□□□□□ -1.29
COF1YLL050C LDB19Q12502 818 aa7.02□□□□□ -1.29
COF1YLL050C GTT3P39996 337 aa6.99□□□□□ -1.29
COF1YLL050C OXP1P28273 1286 aa6.97□□□□□ -1.29
COF1YLL050C PTP3P40048 928 aa6.95□□□□□ -1.3
COF1YLL050C ULI1P43604 169 aa6.94□□□□□ -1.3
COF1YLL050C IOC2Q12072 812 aa6.94□□□□□ -1.3
COF1YLL050C BBC1P47068 1157 aa6.93□□□□□ -1.3
COF1YLL050C YIL055CP40523 627 aaKnown RBP6.89□□□□□ -1.31
COF1YLL050C AI2P03876 854 aa6.83□□□□□ -1.32
COF1YLL050C RSM7P47150 247 aa6.79□□□□□ -1.32
COF1YLL050C MSB4Q12317 492 aa6.79□□□□□ -1.32
COF1YLL050C EAP1P36041 632 aaKnown RBP6.78□□□□□ -1.32
COF1YLL050C RTG1P32607 177 aa6.77□□□□□ -1.33
COF1YLL050C PIB1Q06651 286 aa6.76□□□□□ -1.33
COF1YLL050C NCR1Q12200 1170 aa6.75□□□□□ -1.33
COF1YLL050C TRP5P00931 707 aaKnown RBP6.69□□□□□ -1.34
COF1YLL050C SEC61P32915 480 aa6.69□□□□□ -1.34
COF1YLL050C BCK2P33306 851 aa6.68□□□□□ -1.34
COF1YLL050C YNL035CP53962 389 aaKnown RBP6.67□□□□□ -1.34
COF1YLL050C YOL036WQ08206 761 aa6.67□□□□□ -1.34
COF1YLL050C SET4P42948 560 aa6.66□□□□□ -1.34
COF1YLL050C YAH1Q12184 172 aaKnown RBP6.62□□□□□ -1.35
COF1YLL050C TFG1P41895 735 aaPredicted RBP6.6□□□□□ -1.35
COF1YLL050C CHL1P22516 861 aaPredicted RBP6.57□□□□□ -1.36
COF1YLL050C SAP30P38429 201 aa6.57□□□□□ -1.36
COF1YLL050C RGA2Q06407 1009 aa6.55□□□□□ -1.36
COF1YLL050C MRM1P25270 412 aa6.52□□□□□ -1.37
COF1YLL050C PSD2P53037 1138 aaKnown RBP6.52□□□□□ -1.37
COF1YLL050C PRE3P38624 215 aa6.51□□□□□ -1.37
COF1YLL050C DAN4P47179 1161 aa6.49□□□□□ -1.37
COF1YLL050C YDL129WQ07555 291 aa6.49□□□□□ -1.37
COF1YLL050C VMA1P17255 1071 aaKnown RBP6.47□□□□□ -1.37
COF1YLL050C JIP4Q03361 876 aa6.47□□□□□ -1.37
COF1YLL050C YLR271WQ06152 274 aa6.47□□□□□ -1.37
COF1YLL050C SAM3Q08986 587 aa6.47□□□□□ -1.37
COF1YLL050C YMR1P47147 688 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
COF1YLL050C DBP1P24784 617 aaKnown RBP6.45□□□□□ -1.38
COF1YLL050C XDJ1P39102 459 aa6.44□□□□□ -1.38
COF1YLL050C YFR006WP43590 535 aa6.41□□□□□ -1.38
COF1YLL050C VRP1P37370 817 aa6.4□□□□□ -1.38
COF1YLL050C ABP1P15891 592 aaKnown RBP6.39□□□□□ -1.39
COF1YLL050C VPS29P38759 282 aa6.39□□□□□ -1.39
COF1YLL050C DPS1P04802 557 aaKnown RBP6.38□□□□□ -1.39
COF1YLL050C STS1P38637 319 aa6.37□□□□□ -1.39
COF1YLL050C HTA1P04911 132 aaKnown RBP6.34□□□□□ -1.39
COF1YLL050C HTA2P04912 132 aa6.34□□□□□ -1.39
COF1YLL050C PTC4P38089 393 aa6.33□□□□□ -1.4
COF1YLL050C RGA1P39083 1007 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms